MELO3C034869 (gene) Melon (DHL92) v4

Overview
NameMELO3C034869
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCytochrome P450 77A3-like
Locationchr05: 6982254 .. 6982478 (-)
RNA-Seq ExpressionMELO3C034869
SyntenyMELO3C034869
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACGTTGTTTTCATACCTGAAAATGCTTTTCGATTTTAAAATCGACGGGCGTGGCGGCGGAGGAAATTCGTCGGCAATAGACGAGGAATTGGTGATACTTTGTTCGAAGTTTTTGAACGGGGGACGAACACGACGAAGACAGTGATAGGGTGGGGGATGGCGGAATTGATAGCGAATGAGGAAGTTTAGAGGAAGATTATGGAAGAAGACAAAATAGAGGT

mRNA sequence

ATGCGACGTTGTTTTCATACCTGAAAATGCTTTTCGATTTTAAAATCGACGGGCGTGGCGGCGGAGGAAATTCGTCGGCAATAGACGAGGAATTGGTGATACTTTGTTCGAAGTTTTTGAACGGGGGACGAACACGACGAAGACAGTGATAGGGTGGGGGATGGCGGAATTGATAGCGAATGAGGAAGTTTAGAGGAAGATTATGGAAGAAGACAAAATAGAGGT

Coding sequence (CDS)

ATGCTTTTCGATTTTAAAATCGACGGGCGTGGCGGCGGAGGAAATTCGTCGGCAATAGACGAGGAATTGGTGATACTTTGTTCGAAGTTTTTGAACGGGGGACGAACACGACGAAGACAGTGA

Protein sequence

MLFDFKIDGRGGGGNSSAIDEELVILCSKFLNGGRTRRRQ
Homology
[Close]
BLAST of MELO3C034869 vs. NCBI nr
Match: KAA0034667.1 (cytochrome P450 77A3-like [Cucumis melo var. makuwa] >TYK09218.1 cytochrome P450 77A3-like [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFDF+IDGR GGGNSSA +EELV LCS+FLNGG
Sbjct: 275 LFDFRIDGRSGGGNSSATEEELVTLCSEFLNGG 307

[Close]
BLAST of MELO3C034869 vs. NCBI nr
Match: XP_008446777.2 (PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 77A3-like [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFDF+IDGR GGGNSSA +EELV LCS+FLNGG
Sbjct: 275 LFDFRIDGRSGGGNSSATEEELVTLCSEFLNGG 307

[Close]
BLAST of MELO3C034869 vs. NCBI nr
Match: KAA0056656.1 (cytochrome P450 77A3-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LF+FKIDGRG GGNS A DEELV LCS+FLNGG
Sbjct: 82  LFNFKIDGRGDGGNSLATDEELVTLCSEFLNGG 114

[Close]
BLAST of MELO3C034869 vs. NCBI nr
Match: TYK04616.1 (cytochrome P450 77A3-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LF+FKIDGRG GGNS A DEELV LCS+FLNGG
Sbjct: 82  LFNFKIDGRGDGGNSLATDEELVTLCSEFLNGG 114

[Close]
BLAST of MELO3C034869 vs. NCBI nr
Match: XP_011655840.1 (cytochrome P450 77A3 [Cucumis sativus] >KGN52206.1 hypothetical protein Csa_008137 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 2   LFDFKIDGRGG-GGNSSAIDEELVILCSKFLNGG 35
           LFDFKIDGRGG G +SSA DEELV LCS+FLNGG
Sbjct: 275 LFDFKIDGRGGEGKSSSATDEELVTLCSEFLNGG 308

[Close]
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match: A0A5D3CDE2 (Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002110 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-07
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFDF+IDGR GGGNSSA +EELV LCS+FLNGG
Sbjct: 275 LFDFRIDGRSGGGNSSATEEELVTLCSEFLNGG 307

[Close]
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match: A0A1S3BGP7 (LOW QUALITY PROTEIN: cytochrome P450 77A3-like OS=Cucumis melo OX=3656 GN=LOC103489405 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-07
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFDF+IDGR GGGNSSA +EELV LCS+FLNGG
Sbjct: 275 LFDFRIDGRSGGGNSSATEEELVTLCSEFLNGG 307

[Close]
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match: A0A5D3C2H1 (Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00210 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-06
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LF+FKIDGRG GGNS A DEELV LCS+FLNGG
Sbjct: 82  LFNFKIDGRGDGGNSLATDEELVTLCSEFLNGG 114

[Close]
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match: A0A5A7UQR6 (Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001880 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-06
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LF+FKIDGRG GGNS A DEELV LCS+FLNGG
Sbjct: 82  LFNFKIDGRGDGGNSLATDEELVTLCSEFLNGG 114

[Close]
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match: A0A0A0KWN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615280 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-05
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 2   LFDFKIDGRGG-GGNSSAIDEELVILCSKFLNGG 35
           LFDFKIDGRGG G +SSA DEELV LCS+FLNGG
Sbjct: 275 LFDFKIDGRGGEGKSSSATDEELVTLCSEFLNGG 308

[Close]
BLAST of MELO3C034869 vs. TAIR 10
Match: AT5G04660.1 (cytochrome P450, family 77, subfamily A, polypeptide 4 )

HSP 1 Score: 40.4 bits (93), Expect = 3.9e-04
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFD KI+GR     ++  +EELV LCS+FLNGG
Sbjct: 287 LFDLKIEGR----KTTPSNEELVTLCSEFLNGG 315

[Close]
BLAST of MELO3C034869 vs. TAIR 10
Match: AT5G04630.1 (cytochrome P450, family 77, subfamily A, polypeptide 9 )

HSP 1 Score: 40.0 bits (92), Expect = 5.1e-04
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 0 

Query: 2   LFDFKIDGRGGGGNSSAIDEELVILCSKFLNGG 35
           LFD ++DGR     +S  DE+LV LCS+FLN G
Sbjct: 284 LFDLRVDGR----ETSPSDEDLVTLCSEFLNAG 312

The following BLAST results are available for this feature:
BLAST of MELO3C034869 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0034667.11.0e-0681.82cytochrome P450 77A3-like [Cucumis melo var. makuwa] >TYK09218.1 cytochrome P450... [more]
XP_008446777.21.0e-0681.82PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 77A3-like [Cucumis melo][more]
KAA0056656.13.9e-0681.82cytochrome P450 77A3-like [Cucumis melo var. makuwa][more]
TYK04616.13.9e-0681.82cytochrome P450 77A3-like [Cucumis melo var. makuwa][more]
XP_011655840.12.5e-0582.35cytochrome P450 77A3 [Cucumis sativus] >KGN52206.1 hypothetical protein Csa_0081... [more]
BLAST of MELO3C034869 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034869 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CDE25.0e-0781.82Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BGP75.0e-0781.82LOW QUALITY PROTEIN: cytochrome P450 77A3-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5D3C2H11.9e-0681.82Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7UQR61.9e-0681.82Cytochrome P450 77A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A0A0KWN51.2e-0582.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615280 PE=3 SV=1[more]
BLAST of MELO3C034869 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04660.13.9e-0457.58cytochrome P450, family 77, subfamily A, polypeptide 4 [more]
AT5G04630.15.1e-0454.55cytochrome P450, family 77, subfamily A, polypeptide 9 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034869.1MELO3C034869.1mRNA