MELO3C034840.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034840.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPolynucleotide phosphorylase 1
Locationchr11: 8006048 .. 8012076 (-)
RNA-Seq ExpressionMELO3C034840.jh1
SyntenyMELO3C034840.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCTGCCTTATTGCCAATGAGTCACTGCTGTAGTTGTTCGTCATACCCCATTTTCTGCCGTAAAGCTTCGCCTGACATACAACCGTTCTTTGTTGTGTGCCTCTCTATTTTAATCTTTGTTTGCATTGAAAACATAGATTCGAGTCGCTTAGTCCCATCAAAGCTAGATCTGAGTTGCGAGTTCATTCCCATCTTCCTAGCCTTTCGAGTTATCCAAGTCGTTTTCCTCTATTACCGAGCTACGTGATACAAGCCAAGCTTCATAGCTTATTTAAGCTAACTCTTGGAGAGTTTTTTATGGTTTTGACATGGGTTATTTAAGGATCTAAATTTATATTAAATGGGGATAAAAATTTAGATTCTTTCTTAAGGAATGTGCTATTGGAGAAGTAACATTTGAATTTTTGGAATTCACGTCGAGATTGGAGTGGGGCTTAAGTTTCCATTGTTTAGGTAAGTGTGTGGAAGTCATTTTTGGATGAATGGATGAATGTGTTTGCAAAAGTGATTGATTTCCTGTTTATGTTTAGGTTTGTTCGTTTGGACTTTAGTTCGATCAAGGGATTTAGTTAAGTTCGAGGTAAGGGATTTCTACTACTGGACCCTATATGGAAGTTGGAATGTATTGACTGAAAGGACTTGATTGCTATATATATATATTAGAATGTGTTGATGGTTTATACTGAATTGAGATGGTTTAACTGTTATGCTTAATTTAAAATGTATTTATGGCTCATACTGTTGACTGAACTGTGATATGCATCAATGTGTTTTTTTTACTGGCTATGTGTAGAGGAGGAGTATTGTTAATAGTTTAATTGTATTTTGATGTGATTGTCTTAGAATATTTAGAATGGACTGAGGGGAAATTATTAGCTTTATCTATGGGGTAGGGTACCTTACAGAAACGGTGTACTATGGGATCACCAGATGTTGTACATCATTAGGGACCACTAGACTGATATGTGCATCCTTATGAGATCATTAGATTGATATGTACATCCTTCGGGATCACTAGATTGATTGACATGTATCCTACGGGATCATAAGAGTGTTATGATGCAGGGTACCTCCTAATAGGAATCTAATCATTTTAACTCTAATGGGACTAGTAGTGGGTCTCTTTCTAGGTATATTTTATACTCTCTCTTTTTATGTTTAACTTTTTTAGGCAAAGATAATATAAGAGGTAGACTGGCGAGGGGCAAGAAGGACTCGTGATCGCCATATAGGAACACTCTTTCAAATGCTTTCGCTTAACGTGTTTACTATTTTTAAGTTTTGATGATTGGAATGAGTTTCATGTTTAGAACAACTGTTTGTTTCTTGGTGACTTTTATAAACGATACTTGTGAACTTTTTTTTAAGTAGGGTCCGAATACAATTTTCTATTTTTTATGTCTATTTGATTTTAAACAGACTTAAAACTTTTATGTTTAAACGAAGTGTCTTTGTGTTAAAGTAATGACCTCAGCTTAGTCTGAAAAGTTGAGTCGTTAGAGTTGGTATCAGAGTCTAAGTTTTAGGTTCTATAGACTATCTTATGATGTAAGTCTATGTTTTGTGTCTCTATGGCTGAAATGAGTAATTGTCACTTGTCACGTATGCTTACATGATTTATATGTATGGTTTAATGTGTATGACCTTACCTAAGTTAAACTGCATGAAGTGATTTATTGTTTAAGATTAAAGAAGTTACTGTTGGATATTAAAAAAAAGCCACCAAGAAGAGGTGCGCGTAGTGGTGGTCGAGGAGGTCGAGGAAGAGGAGCAAGGTGTAACCAACCTGAAGATCAACTTGTTATACAAGCTACCGACCCTACTGCATTGGTCCTACTCAAGCGAACCTTGTTGTAATGAAGCAAAGGTTTAGAGACATGTTAACATAGACATTGGCACAACATCAGCCTTCCCAACTAGCTCTTATTCAAGCCTGAGTTGCACTTGTTCAAGCCTTAGTCTTATCTCAGAACGTACCGATCAGCAGTTAGTAGAAGTTAAACACTTGAGGGATTTCAAGAAGTATAGCCCTTCGACTTTCGATGGATCCTTGGAAGACCCCACCAAGGCACAGATGTGGTTGACATGAGGTTCCCTAACAACCAAACGGTACAGTGCGTTGTGTTCTTATTGAGGGAGAGAGGTACAGCCTAGTGGGAGTCCATAGAAAGGATGCTAGGTGGGGATGTAAATCAGATTACCTGGGAACAGTTGAAGGACAATTTTTATGCTAAATTCTTCTTTGCTAGCCTGAAAGATGCCAAGTGTCCGGAGTTCCTAGAATTGAAGCAAGGCCAAATTATTGTGGAGTAGTAGGAATTCGATATGTTGTCCTATTTTTCTCTTGAGTTAGTAAAGACTGAGACTGCCAGAGCCGATAGATTTGTCAAAGGTCTTAGGTTGGACCTCCAGGATTTCGTTTGAGCTTTCAGGCCAGCTACTTAAGTTAAAGCACTGCGCCTAGCAGTGGACGTGAGTTTACACGAAAGAGTTGCTATGTCCAAGACTTCAGAGAAAGGTTCATCCTGAGGACAGAAAAGGAAGGATGAGAGCAGCCTACTGTAGTGCCATAGAGGAACTTGAGATCTGGTGGAGACTTTTGTCGTTATCAGCAGAACTTTAGTAAGGCAAGTAAAGTTGCCATGGAGAAGTCATTGTGTAACATTTATGGGAAGCATCATCTGGGTCGTTGTTTGTTTGGATCTAGGACTTGCTTCAAGTGTAAGCAAGAGGGGCATATAGCTTATAGATGCTCTATGAGACTTACTGGGAATGCACAAAACCAAGGGGCAGGTATACCACAACTGGATAAAGTATTTGCTACTAATAAATATGAGGCTAAGAGAGTAGGCACGGTGGTGACAGGTATACTTCCAATGTTGGGGCATTATACTTTGATCCAGTTTAATTCTGGTTCATCTCATTCTCTTATATTTTCAATATTTATAACACATGCATGCTTAGAAGTGGAGCCCCTAGATTATATTTTATCAGTGTCTACTTCATTTGTGGAGATTATGTTGTTAAAAGAAAAGATAAAAGCATGTCAAATTGAGATACCAAGTCAAGTATTAGATGTAACTTTGTTGGTCCTGGATATGCATGATTTTGTTCGAGATATGGACATTATGAGTTCATTGTTATGTCTTTTGGGTTGACAAATGCTCCAACACTATTTATGGAATTGATGAATATAGTGTTTAAGGATTTCTTAGACTTTTCTATGACTGTATTTATTGATGATATCTTAGTGTAATCCAAGACAAAGACAAAGCATGAGGATCATTTGTGCATGGTTTTAGATACTCTTCGAGTCAACAAATTGTATGCAAAGTTTTCGAAATGTGAGTTTTGGCTTAAACATGTGTCTTGTCTAGGCCATATGGTGTCAAAAGATCGTATTTCTGTGGACCCAGCAAAGGTTGAAGCTTTACCAGTTGGCTCCGACCTTCCGTAGTTAGTGAGGTTCATAGCTTTCTGAGTTTAACAGGTTATTACTGACGATTTGTGGAGGACTTTTTTCGTATAGCTACTCCTTTAACTTAGTTTACCAAGGAAGGAACTCCATTTGTCTGGAGCAGAGTTTGTGAGGATAGTTTTCAGAACCTTAAGCAGAAGCTTGTTACTGAATCGATTTTTATTGTACCTGATGGTTCAGGTAGTTTTATGATTTACAGTAGTGATGCTTCTAAAAAGGCTTGGATTGTGTACTGATGCAACAAGGTAAGGTAGTTGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAACAGTCGTTTTCGTACTAAAGATTTAAAGGCATTACTAATTGTATGGTTAGAAGATATAGATATTTACTGACCATAAGAGCTTCAAATACTTCTTCACTCAGAAGGAGTTAAACATGAGACGACGAAGGTAGCTTCAGTTAATAAAGGATTATGACTGTTAGATATTGTATCATCCAAGTAAGGTGAATGTGGTAGTTAATGGTTTTAGTAGGAATGTGTCACATTTAACAGCACTTATTACTAGACAGGCCCTATTACACTGAGACTTTGAGAGAGTTGAGGTTGCAGTATCAATTGGGGTAGTCACCTCACAGTTAGCTCAGCTGTCAGTGCAACTGACTTTGAGACAAAAAATTATTGTTGCTCAGGGTAATGATCCTTATTTGGTTGAGAAGTGTCGCCTAACAAAAACTGGGCAAGCTGGTAGGTGGTTTGGCACATGCTTGCTCAGGATTGCCACATTTCTTAAAATGTTTGTGCAAGTCTCCGTTGTATTCATTGAAAGATTTGATGTTTAATGAATCTATTAAGTGCATGATTTGTGAAATCAAGCATGAAATACAGCTACAAAGGAAAAAACCACATGGATTAAGTTTCTGTATATGTAGGTTAGGATGAAACTAATAAACTTACCATAAAGAGCTCTTAATAATTCAATATATTTCGATGGAAGATCAGCAAACTTAAGATACCGGACTAGAAATCACTACAAGAAAAATGACCTACCATGACACTTCATTAAAACCCAAATTGAAATGAGAGGAAAAAATAATGTCATAAATGTCAAAATTAGCATATTTTTGAGGAAAAAACGATGTTTTCAAATTCCACTTCCAGTTAATTGTTGTCATAAAAATGTTAAAACATTAAATAAAAAAAACAATTCCGCCAAATTTCACTTTCCCCCTTTTATTTCTCACGCAAACCCTTTCACTTTACCCTTTCATTTTCTCATGAACGGTTGACGCTCCACCATGATGGTTGAAGTTCCACCACGGACGGTTATGCAACACCTTCTCCTTCTACCACGCGACACAACACCAAGAATGGTCCACCACATTGTTATTTTTGTTGACAATTTTGAGAACTCTTTAAAGATTTGTTCACTTTTTAATATTTACTAGTTTTTCATGATAGGATGGTATCCGTTTGTGGGTTCATTGGCTTTGCAAGATGCTGAAGTTCCAATTAAGTGTCCAATTGTTGGCCTAGCAATGGGATTGGTTCTTGGTACAAAGAATTTGGGGAGATGGAACTCCACTTATTCTGTTTGACATAACAGAATCTGAGGATGCTTCCAGAGATATGGAATTTAAGGTATTATTTTAAAGTTTTAATTGGTCTTTTATTAAAACAAGATTCCAATGCCTATAAAGTACGTTGTTGGAACTGTAGCTGCTAAACCCTGATTATTATGCATAAAACTGTTGTTTTACAGTTAGCTAGTAACAAAATGGGCATAACAGCATTTCAGATGGACATAAAGGTATGTTATTCGTAGGTTGTATTCCAGTTTCTTACAGATTGGTTAATAATTATGACATTTCTATAAATATGTTTACTTGATATTCTTCAAAAGTCCATGTGAAGATAAGAATCTGTCTCGATATTATAGGTGGGAGGCATTACTATACTCATTATGAGAGGTGCTCCTGCAAGCAAAGTTTAAGCGTAAGTATATTCTTTGTTAATAAACCCTCTTCGGTACTTCCTTTTAGAACTTGTTTATGATTGGGAATTTGTTTATGAGGAAGAAATCTAATTAGTTGGCAGTGTGTATATTCATTACATTGTATCAAAGAGAAATTTTAGCAATTAGCAAAAAGGGTTTTCCTTGATAAAGAAGATTAATTTCATTTATGATTGAATCAGGGTGAGCGCTCTGAATAATATTGAACTAGCATTCTGATAATATTGTAGTAATTTTGGAATATCCTAGTGACTTCTGTTTCTAAGATCCTCTAGAGTCTATTGTGATCATCATCAAAGGATACAGACCAATGAAATTAAACCATTTAGCTCTAGTAATGTTTTATGAATACTTGATATCTTGGTTGCCATAAAACTTATAAACCAAGATTTTTTTTGGAAAGGAAACATACCAAGACCATACTGTACTATTTTTCTACTTCCTCAAGTTTGCAATTAGAGCCGATAGCAGCTGGCTATGTTGTTTCTCTTTTTAGGACAACATATTTGAGTACAAGCTCCCATCATTACAA

mRNA sequence

ATGGAGATCTGCCTTATTGCCAATGAGTCACTGCTATTCGAGTCGCTTAGTCCCATCAAAGCTAGATCTGAGTTGCGAGTTCATTCCCATCTTCCTAGCCTTTCGAGTTATCCAAGTCGTTTTCCTCTATTACCGAGCTACGTGATACAAGCCAAGCTTCATAGCTTATTTAAGCTAACTCTTGGAGAGTTTTTTATGGTTTTGACATGGGAATGTGCTATTGGAGAAGTAACATTTGAATTTTTGGAATTCACGTCGAGATTGGAGTGGGGCTTAAGTTTCCATTGTTTAGGATGGTATCCGTTTGTGGGTTCATTGGCTTTGCAAGATGCTGAAGTTCCAATTAAGTGTCCAATTGTTGGCCTAGCAATGGGATTGGTTCTTGAATCTGAGGATGCTTCCAGAGATATGGAATTTAAGTTAGCTAGTAACAAAATGGGCATAACAGCATTTCAGATGGACATAAAGGACAACATATTTGAGTACAAGCTCCCATCATTACAA

Coding sequence (CDS)

ATGGAGATCTGCCTTATTGCCAATGAGTCACTGCTATTCGAGTCGCTTAGTCCCATCAAAGCTAGATCTGAGTTGCGAGTTCATTCCCATCTTCCTAGCCTTTCGAGTTATCCAAGTCGTTTTCCTCTATTACCGAGCTACGTGATACAAGCCAAGCTTCATAGCTTATTTAAGCTAACTCTTGGAGAGTTTTTTATGGTTTTGACATGGGAATGTGCTATTGGAGAAGTAACATTTGAATTTTTGGAATTCACGTCGAGATTGGAGTGGGGCTTAAGTTTCCATTGTTTAGGATGGTATCCGTTTGTGGGTTCATTGGCTTTGCAAGATGCTGAAGTTCCAATTAAGTGTCCAATTGTTGGCCTAGCAATGGGATTGGTTCTTGAATCTGAGGATGCTTCCAGAGATATGGAATTTAAGTTAGCTAGTAACAAAATGGGCATAACAGCATTTCAGATGGACATAAAGGACAACATATTTGAGTACAAGCTCCCATCATTACAA

Protein sequence

MEICLIANESLLFESLSPIKARSELRVHSHLPSLSSYPSRFPLLPSYVIQAKLHSLFKLTLGEFFMVLTWECAIGEVTFEFLEFTSRLEWGLSFHCLGWYPFVGSLALQDAEVPIKCPIVGLAMGLVLESEDASRDMEFKLASNKMGITAFQMDIKDNIFEYKLPSLQ
Homology
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BLAST of MELO3C034840.jh1 vs. NCBI nr
Match: XP_008443302.1 (PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 1.04e-14
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. NCBI nr
Match: XP_011652202.1 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucumis sativus] >KGN59486.1 hypothetical protein Csa_002305 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 1.04e-14
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. NCBI nr
Match: XP_038904843.1 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 82.4 bits (202), Expect = 1.04e-14
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 578 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 637

[Close]
BLAST of MELO3C034840.jh1 vs. NCBI nr
Match: KAA0053844.1 (putative polyribonucleotide nucleotidyltransferase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.04e-14
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 565 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 624

[Close]
BLAST of MELO3C034840.jh1 vs. NCBI nr
Match: TYK25556.1 (putative polyribonucleotide nucleotidyltransferase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.04e-14
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match: Q69LE7 (Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PNP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 157
           G LALQDA VPIK P+ G+AMGLVL+                  +EDAS DM+FK+A N+
Sbjct: 580 GCLALQDAGVPIKFPVAGIAMGLVLDTLEFGGDGKPLILSDITGAEDASGDMDFKVAGNE 639

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match: Q8GZQ3 (Polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNP1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 157
           G LALQDA VP+KC + G+AMG+V +                  +EDAS DM+FK+A N+
Sbjct: 579 GCLALQDAGVPVKCSVAGIAMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNE 638

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match: Q5L5B4 (Polyribonucleotide nucleotidyltransferase OS=Chlamydia abortus (strain DSM 27085 / S26/3) OX=218497 GN=pnp PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-10
Identity = 37/65 (56.92%), Postives = 41/65 (63.08%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLES------------EDASRDMEFKLASNKMGITAF 157
           G LAL DA VPIK PI G+AMGL+LE             ED   DM+FK+A N  GITAF
Sbjct: 445 GCLALMDAGVPIKTPIAGIAMGLILEDDHVTILSDISGLEDHLGDMDFKVAGNTEGITAF 504

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match: Q822C1 (Polyribonucleotide nucleotidyltransferase OS=Chlamydophila caviae (strain ATCC VR-813 / DSM 19441 / GPIC) OX=227941 GN=pnp PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-10
Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLES------------EDASRDMEFKLASNKMGITAF 157
           G LAL DA VPIK PI G+AMGL+L++            ED   DM+FK+A N  GITAF
Sbjct: 445 GCLALMDAGVPIKTPIAGIAMGLILDNDHVTILSDISGLEDYLGDMDFKVAGNTEGITAF 504

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match: Q255L4 (Polyribonucleotide nucleotidyltransferase OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=pnp PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.7e-10
Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLES------------EDASRDMEFKLASNKMGITAF 157
           G LAL DA VPIK PI G+AMGL+L+             ED   DM+FK+A N  GITAF
Sbjct: 445 GCLALMDAGVPIKTPIAGIAMGLILDDDHVTILSDISGLEDHLGDMDFKVAGNAEGITAF 504

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LHJ6 (Polynucleotide phosphorylase 1 OS=Cucumis sativus OX=3659 GN=Csa_3G822370 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.02e-15
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B784 (Polynucleotide phosphorylase 1 OS=Cucumis melo OX=3656 GN=LOC103486923 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.02e-15
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UF08 (Polynucleotide phosphorylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002350 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.03e-15
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 565 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 624

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DPG4 (Polynucleotide phosphorylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007090 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.04e-15
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPIKCPI G+AMGLVL+                  SEDAS DM+FKLA N+
Sbjct: 577 GSLALQDAGVPIKCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNE 636

[Close]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match: A0A6J1D259 (Polynucleotide phosphorylase 1 OS=Momordica charantia OX=3673 GN=LOC111016614 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.12e-14
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 156
           GSLALQDA VPI+CPI G+AMGLVL+                  SEDAS DM+FK+A N+
Sbjct: 573 GSLALQDAGVPIRCPIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNE 632

[Close]
BLAST of MELO3C034840.jh1 vs. TAIR 10
Match: AT3G03710.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGLVLE------------------SEDASRDMEFKLASNK 157
           G LALQDA VP+KC + G+AMG+V +                  +EDAS DM+FK+A N+
Sbjct: 579 GCLALQDAGVPVKCSVAGIAMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNE 638

[Close]
BLAST of MELO3C034840.jh1 vs. TAIR 10
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 104 GSLALQDAEVPIKCPIVGLAMGL-------------------VLESEDASRDMEFKLASN 157
           GS+AL DA +P++  + G+++GL                   +L  ED   DM+FK+A  
Sbjct: 495 GSMALMDAGIPLRAHVAGVSVGLITDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGT 554

The following BLAST results are available for this feature:
BLAST of MELO3C034840.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443302.11.04e-1463.38PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [... [more]
XP_011652202.11.04e-1463.38probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucumis sat... [more]
XP_038904843.11.04e-1463.38probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Benincasa h... [more]
KAA0053844.11.04e-1463.38putative polyribonucleotide nucleotidyltransferase 1 [Cucumis melo var. makuwa][more]
TYK25556.11.04e-1463.38putative polyribonucleotide nucleotidyltransferase 1 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034840.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q69LE76.1e-1153.52Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Oryza sat... [more]
Q8GZQ31.8e-1049.30Polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Arabidopsis thalia... [more]
Q5L5B43.0e-1056.92Polyribonucleotide nucleotidyltransferase OS=Chlamydia abortus (strain DSM 27085... [more]
Q822C15.1e-1055.38Polyribonucleotide nucleotidyltransferase OS=Chlamydophila caviae (strain ATCC V... [more]
Q255L46.7e-1055.38Polyribonucleotide nucleotidyltransferase OS=Chlamydia felis (strain Fe/C-56) OX... [more]
BLAST of MELO3C034840.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHJ65.02e-1563.38Polynucleotide phosphorylase 1 OS=Cucumis sativus OX=3659 GN=Csa_3G822370 PE=3 S... [more]
A0A1S3B7845.02e-1563.38Polynucleotide phosphorylase 1 OS=Cucumis melo OX=3656 GN=LOC103486923 PE=3 SV=1[more]
A0A5A7UF085.03e-1563.38Polynucleotide phosphorylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3DPG45.04e-1563.38Polynucleotide phosphorylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1D2593.12e-1460.56Polynucleotide phosphorylase 1 OS=Momordica charantia OX=3673 GN=LOC111016614 PE... [more]
BLAST of MELO3C034840.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03710.11.3e-1149.30polyribonucleotide nucleotidyltransferase, putative [more]
AT5G14580.11.0e-0534.72polyribonucleotide nucleotidyltransferase, putative [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 102..164
e-value: 1.8E-13
score: 52.1
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 104..156
NoneNo IPR availablePANTHERPTHR11252:SF12POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, CHLOROPLASTICcoord: 104..156
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 108..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034840.jh1.t1MELO3C034840.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006402 mRNA catabolic process
molecular_function GO:0004654 polyribonucleotide nucleotidyltransferase activity
molecular_function GO:0003723 RNA binding