MELO3C034838 (gene) Melon (DHL92) v4

Overview
NameMELO3C034838
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description50S ribosomal protein L1
Locationchr11: 21504735 .. 21509247 (-)
RNA-Seq ExpressionMELO3C034838
SyntenyMELO3C034838
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAACTCCCTAATGCTCCTCACGCAAAAACCCTCCATCTTCGTCGTCTCCTCCCATTCCCGTGTCCTCCCTCAACGCCGTCGGCTGCCGCTGCTACACTTAACTTCTCCGTCTTTGAACGCCACCAGCTGCTACTACCGTTTGGGTTCGGACACCGCTGCTACCGTTTCGGTTCAAACACCGCGTCTCCTCTCCCTCAACACCACTGCTACCATTTTAGTTCGAACGTCGCGTCTCTTCTCCCTCAACACCGCTACTACCCTTTGTAAGTCTTTGTTCATCTCCCTTCTCTTGAATCCTCGAAGAATCTTTTTTTTACTTTTTCTTCTATGGTAATGATATTGTGTTGAGAGTTGAAATTCAAAGAGCTAAAATATTGAGGAAATTCTTCGAAATTTTGCTGATTTTGTGTCTTTGATGGCGAAGAGTTAGGTTAAATTAGGCGAGAGGTTGATTGATAGGAAGGTGGGGACTAAAGAGCCATTGTTGGTTAGACTTCAATGGGTAGTGAAGCATGTTAAGAAGGAGCAACAAAATGTTTTACGTTTGGTGATTGAGAAGGCACATGGGTTTCTTTCTTTGGAATGTTTTACTGTTGAAACTCCAGCTTCCTTTATTCAAGTATTTATCGCTTTTATTTGTTTGATGGTAGTATAGTTTTGTGAAATATATTAATGGTTTTGTGAAATATATTGTTGGCTATGTGATGAAGCATTTTGGTAGCTTACAATGTGTTTGATGAAATGCCTCAATGAAGCCTTTGGTTGATTTTTAATTGATTTTTAATATATTTTAAACTTTGATGATGTGTAGGGCCTTTAAGCATTTTCCAGAGTTTAGTTGTTACAGTCATACATGTTTAGTGTTAGGTTTTATTTCTAGTAGTGCAGGAATTTCAATCTCCTCTCTTATTGAAAAGAATATTTAGTCTTAGGATGTATTCAGAATTGTTTCTCAAGTAATGACTTTTGGAATGAATGGAAAATTATTGGGATACTTGGTTCTATATTCTGCTATGGTTTCTTACCTAGCACTTTAAGGTGCTTACATTTTTTTTTAAAACAGGAAAATTTTTAGAAGACTTTTGCCAAAGACACTTTCAAGAATGGCCTTCATCACACATTCATGTTCTTTAAAAAATATCCAAAAAGTTGTGAGTGAAGTTGATGGTTTCCAACCTCATTTAATTGCTCCGGAACAAGGATACATGAGGCTTATTTATGGTTCAATCAGCTATTTAGTTTACAGATTCACCATACTGTGTTGAGAATCTTACTTTTTTATTATCATCTTAAAATCACCTCTTTGTTGCAAAAATTTATTGTCAAGATGATAAACATTTTTTTTATGTGCACATTATTAGGAGAAAAAATAGTAAATCAGAAAAAAAGAAAATTCCTCTACTATTGATGAGTGAATATCCTTCTTGTCATCAGTGTGACATATGTGATACATGGTATTTGGAGAATGAAAATATTTATTTGTTCTTTATTAAATTTTCATACAGCTGTGTAGTGTGACATGGTTAATACCGATTAGTTGGTTTTCCCCTTTGAAATCAATTTCGCAACAATTTGAGTGAAGAGAATGAGATGAATGCTATGATATGACTTTTTAATTAACTCTCTTATATATATTTGTTTTTTATTTCCTCTTTTAGAAGTGTTCATGTGGATTTTCTTATCTGTCCCCGTCTCTCTAATCAAATATAAATTTTGAGATTTAGCTTATATCGGCCATATTGTCGTGCTGCTTTTTAAAAAATGTTGTTTGTATCTGCATCATATCTCTTCTTATGGCACCTTTTTTCTTCTTCAACTTTCATTTTCTTTCATTTTCTTTCATCCATTTCATATAATCTCATTGCTTTATGAATCACGTAGGTGAAAAATTCAACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTTCTTCACCAGATATGATGCCCAAGGTATGGTTCTTAAATCTTTTTATTGCTATACATTGTGGTAGCTTTCCAAAAGTACAAGTATTTCTAACAACATTGTCCATAGCAATGAAGTAGTTTTCACATGTACTTTGATTTTTGAGGTTCTGATTTTGATGCACACCAATATGACTTAAAAATGAATGAGTTGTAAGTTTTCTATTTTAACTTTTCTCGACATCCAAGACAATGTGAGTTGTGAAATTATTCAGCTTCATTATTTTATCAAGATAAAATGATGTTTTTTAACCTCCTAATTCTACTTTTCTTCTTATTTGTTTTTATCATCTCTTGGTCATTGTAGACTTTCAACTGATGGAAAGGATTTCTTCACTTCATACAATGAAGTTTATGACAGTTTTGATTTTATGGGCCTATAAGAAAATTAAACCTTCTCAGAGGGATCTATGCCTACGGTTGGTATATAGGACTACTAATTTTCTCCTTAACTTGTGAATTGCTTTCTTTTTTTTTTTCTATTTTAATAATTAATAATTAAGCAATCTCTATGGAATTTTAAGTAGTAGTTGCGTACTATTTGTTGCTCTAGTTGGTTTGCAATGTTCAGTATTGTAATTTCAATGTCATTTTAAAGGTTTTGAGAAGTCATCCGCAATTCAATAAAGGAGAATTGTTCCTCTTCGCAAAGGGCTTGATGTAATCCAACAAGCCCAGTCTAGAATTGGGAAGACTGCAACTTTTTGCTCCAACATTTTTCAGCAACTTGATTATGGTCTTGTGCAGTGCCAAGCATGTTACTTCCATTTAATGTTTGTATTCTGTTAATGAATAAGGTTTGTATGCATTGGCTTATTTTTTAATTTGAAGCACAATACTAAGTTATTGATGCAATCTTTTCATTCTAGTGTGTGACACTTAAGGGGTAGACACCTCTTGAAGTATGCATTTTCTACTAGGAACTTACAGACCCACCCTTTCCTCCATATATTTCTAATTTATCAAAAACTTAGATAATGGTCGTTTTTATTTAGAAACTGATTCTTGAGGCCAATATTGAAGAATTTAGTTAGTTGGTGCAAAATATAGCAATTATATAGGTTAAATGAATGGCTTCAAAACTTAGTGCAATCCATCAAAATGCTTTCAACATGTTTGTGTCTCATGGTTAGACGTGTGGAAATGTTTGTTATGTTTATGTTCTTTAATTATATAGTAGATTGATTTATAGTCTTGTGCATGATTTTGACTTCAAAATATTTTTTGCAGCTAATTTTAGAACTTGGTTATTATATTGAGGAGCTAAGCAAACACAAGGTGCTATAAAGAAATTTGTCAATTCCAAGTATTTTCCAACTATTCTACTATGTGCTGGGTGCACTATTGTACAGTTAAATTCAAAGTAAGAGTTCTTTTCCAACTACTCTATTGCTTACTATTGAGTTGCAATTATTCGAGTCTCTTTCTTGTTCTTATTGTATATTCAAGATGCTTCTTGCAACCAGAAATGCCATGAAATTTCTTCATAACTAACTTTTTTGCATTTTCAATTCCTAACTCAATTCCTCTATGATGACTATATTTATTAATTAATAGATAGTTGTTCCAAGTTTTATTTTGTGTTTATAACTATTAAATGCATTATATATTTACATTTTCTTTGCAGCTCCGATCATGTTCTTCAGACACCTTTTCAAGGTAGGCTGATGGCTATAGTGAGTTTCCATTTTGTAATGCTTTATGAGAGAAGTGTGGTGTGTATTTTGTGGGAAGAGTGATCCTTAAAGTACTTATTGTCTAAATGGTGGTTTGTTTTTGTAGATCATGGCACCGTTGAGTGGATTTGCTGGAGTGTACACTAAGGTGAATTACTTGTGTTCATTTATTACGATTCTCATGATCCTAAATCATGTCCTTAGGTATTAAACAATTGCAGTCTTAGAGTTATTAGCATCAATAGTAGATCTTATCTTAGGCTAACTTTATGAAAGTCTTCGTTATTCAATCAATTAGTGTGGAAATATACACTACATAAATAGCACCAAGTCTATTTTCTTAATTTTCTTATATTTGGAAAAATATGGTGACAACATTTGCTTTTTCAGTGTCTTTGTTATATCTATAGTGTTAAAGCATGCAGATAATATTGTGAAGGTATTGCTCATTACAACTATGAGGTCTTAATTCATTTGATGAATTTATTTGTACCTTTAAGGTCCTACTACTTAAAGTTGTTATATCGCAGTCCTATTACAATCATCATCAAATATGTATGTGTTGTGTTGTTGAAGTAGTGCTGTGTTGTTGATGCGTAAAGTCATACTCTAAAATTTCTTTTTCTTTTCTTACTAGGTTTTGGAAGAATCTATTGGAGCAATGAAACCATATTTGCGGCAATTCGTTGATGTATATCCCTTTTTGTAGGTTTAGTAGTAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTCGTACCAAAACATATATGTTGATTGCTTCATTGTACAAACACTTTACCAAAAATTG

mRNA sequence

ACAAACTCCCTAATGCTCCTCACGCAAAAACCCTCCATCTTCGTCGTCTCCTCCCATTCCCGTGTCCTCCCTCAACGCCGTCGGCTGCCGCTGCTACACTTAACTTCTCCGTCTTTGAACGCCACCAGCTGCTACTACCGTTTGGGTTCGGACACCGCTGCTACCGTTTCGGTTCAAACACCGCGTCTCCTCTCCCTCAACACCACTGCTACCATTTTAGTTCGAACGTCGCGTCTCTTCTCCCTCAACACCGCTACTACCCTTTGTGAAAAATTCAACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTTCTTCACCAGATATGATGCCCAAGACTTTCAACTGATGGAAAGGATTTCTTCACTTCATACAATGAAGTTTATGACAGTTTTGATTTTATGGGCCTATAAGAAAATTAAACCTTCTCAGAGGGATCTATGCCTACGCTAATTTTAGAACTTGGTTATTATATTGAGGAGCTAAGCAAACACAAGGTGCTATAAAGAAATTTGTCAATTCCAAGTATTTTCCAACTATTCTACTATGTGCTGGGTGCACTATTGTACAGTTAAATTCAAACTCCGATCATGTTCTTCAGACACCTTTTCAAGATCATGGCACCGTTGAGTGGATTTGCTGGAGTGTACACTAAGGTTTTGGAAGAATCTATTGGAGCAATGAAACCATATTTGCGGCAATTCGTTGATGTATATCCCTTTTTGTAGGTTTAGTAGTAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTCGTACCAAAACATATATGTTGATTGCTTCATTGTACAAACACTTTACCAAAAATTG

Coding sequence (CDS)

ATGCTCCTCACGCAAAAACCCTCCATCTTCGTCGTCTCCTCCCATTCCCGTGTCCTCCCTCAACGCCGTCGGCTGCCGCTGCTACACTTAACTTCTCCGTCTTTGAACGCCACCAGCTGCTACTACCGTTTGGGTTCGGACACCGCTGCTACCGTTTCGGTTCAAACACCGCGTCTCCTCTCCCTCAACACCACTGCTACCATTTTAGTTCGAACGTCGCGTCTCTTCTCCCTCAACACCGCTACTACCCTTTGTGAAAAATTCAACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTTCTTCACCAGATATGATGCCCAAGACTTTCAACTGA

Protein sequence

MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPKTFN
Homology
[Close]
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match: P49208 (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 39/42 (92.86%), Postives = 42/42 (100.00%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           E+F+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Sbjct: 134 ERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 175

[Close]
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Sbjct: 190 EKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVK 231

[Close]
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 31/42 (73.81%), Postives = 38/42 (90.48%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           +K +EAK AGAD+VGGE+LIEQIKGGFM+FDKLI++ DMM K
Sbjct: 196 DKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMAK 237

[Close]
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match: B8JB73 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) OX=455488 GN=rplA PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.8e-09
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM 126
           +K  EA+ AGAD+VG EDL E+I+GGFM+FDKLI++PDMM
Sbjct: 82  DKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMM 121

[Close]
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match: Q2II81 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=rplA PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.8e-09
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM 126
           +K  EA+ AGAD+VG EDL E+I+GGFM+FDKLI++PDMM
Sbjct: 82  DKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMM 121

[Close]
BLAST of MELO3C034838 vs. NCBI nr
Match: KAA0054392.1 (50S ribosomal protein L1 [Cucumis melo var. makuwa] >TYJ96818.1 50S ribosomal protein L1 [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL 60
           MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL
Sbjct: 1   MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL 60

Query: 61  SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS 120
           SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS
Sbjct: 61  SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS 120

Query: 121 SPDMMPK 128
           SPDMMPK
Sbjct: 121 SPDMMPK 127

[Close]
BLAST of MELO3C034838 vs. NCBI nr
Match: GFY92169.1 (putative glucosamine-fructose-6-phosphate aminotransferase [Actinidia rufa])

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-14
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 83  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Sbjct: 603 TDCEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIATPDMMPK 647

[Close]
BLAST of MELO3C034838 vs. NCBI nr
Match: GFY92209.1 (ribosomal protein L1p/L10e family [Actinidia rufa])

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-14
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 83  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Sbjct: 155 TDCEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIATPDMMPK 199

[Close]
BLAST of MELO3C034838 vs. NCBI nr
Match: XP_027354619.1 (50S ribosomal protein L1, chloroplastic isoform X3 [Abrus precatorius])

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-13
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Sbjct: 114 EKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 155

[Close]
BLAST of MELO3C034838 vs. NCBI nr
Match: XP_030965667.1 (50S ribosomal protein L1, chloroplastic [Quercus lobata])

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-13
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Sbjct: 211 EKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 252

[Close]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match: A0A5A7UF52 (50S ribosomal protein L1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00090 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL 60
           MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL
Sbjct: 1   MLLTQKPSIFVVSSHSRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLL 60

Query: 61  SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS 120
           SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS
Sbjct: 61  SLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLIS 120

Query: 121 SPDMMPK 128
           SPDMMPK
Sbjct: 121 SPDMMPK 127

[Close]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match: A0A7J0F1X3 (Ribosomal protein OS=Actinidia rufa OX=165716 GN=Acr_08g0006050 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 83  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Sbjct: 155 TDCEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIATPDMMPK 199

[Close]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match: A0A7J0F1T0 (Putative glucosamine-fructose-6-phosphate aminotransferase OS=Actinidia rufa OX=165716 GN=Acr_08g0005650 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 83  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Sbjct: 603 TDCEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIATPDMMPK 647

[Close]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match: A0A5D3CGN7 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00300 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Sbjct: 203 EKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 244

[Close]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match: A0A1S3TKD3 (Ribosomal protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106756342 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Sbjct: 194 EKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPK 235

[Close]
BLAST of MELO3C034838 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Sbjct: 190 EKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVK 231

[Close]
BLAST of MELO3C034838 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 86  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK 128
           EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Sbjct: 190 EKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVK 231

[Close]
BLAST of MELO3C034838 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 46.2 bits (108), Expect = 2.3e-05
Identity = 21/41 (51.22%), Postives = 33/41 (80.49%), Query Frame = 0 

Query: 90  EAKNAGADLVGGEDLIEQI-KGGFMEFDKLISSPDMMPKTF 130
           +AK AGAD+VGG +LIE+I K G ++FD+ +++P MMP+ +
Sbjct: 253 DAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVY 293

The following BLAST results are available for this feature:
BLAST of MELO3C034838 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P492081.8e-1592.8650S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=R... [more]
Q9LY664.2e-1280.9550S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ... [more]
Q9LE951.4e-1073.8150S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=... [more]
B8JB739.8e-0967.5050S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC B... [more]
Q2II819.8e-0967.5050S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=2903... [more]
BLAST of MELO3C034838 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054392.12.4e-60100.0050S ribosomal protein L1 [Cucumis melo var. makuwa] >TYJ96818.1 50S ribosomal pr... [more]
GFY92169.19.7e-1491.11putative glucosamine-fructose-6-phosphate aminotransferase [Actinidia rufa][more]
GFY92209.19.7e-1491.11ribosomal protein L1p/L10e family [Actinidia rufa][more]
XP_027354619.16.3e-1395.2450S ribosomal protein L1, chloroplastic isoform X3 [Abrus precatorius][more]
XP_030965667.16.3e-1395.2450S ribosomal protein L1, chloroplastic [Quercus lobata][more]
BLAST of MELO3C034838 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UF521.1e-60100.0050S ribosomal protein L1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A7J0F1X34.7e-1491.11Ribosomal protein OS=Actinidia rufa OX=165716 GN=Acr_08g0006050 PE=3 SV=1[more]
A0A7J0F1T04.7e-1491.11Putative glucosamine-fructose-6-phosphate aminotransferase OS=Actinidia rufa OX=... [more]
A0A5D3CGN73.1e-1395.24Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00... [more]
A0A1S3TKD33.1e-1395.24Ribosomal protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106756342 PE=3 SV=... [more]
BLAST of MELO3C034838 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63490.13.0e-1380.95Ribosomal protein L1p/L10e family [more]
AT3G63490.23.0e-1380.95Ribosomal protein L1p/L10e family [more]
AT2G42710.12.3e-0551.22Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 81..129
e-value: 3.2E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 84..127
NoneNo IPR availablePANTHERPTHR23105:SF110MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGEcoord: 84..127
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 87..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034838.1MELO3C034838.1mRNA