MELO3C034833 (gene) Melon (DHL92) v4

Overview
NameMELO3C034833
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionATPase family AAA domain-containing protein 1-B isoform X1
Locationchr11: 7166615 .. 7168384 (-)
RNA-Seq ExpressionMELO3C034833
SyntenyMELO3C034833
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAGAGTTCACGATTCTCTTCCCCAAATTTCCTCTTTTCCCCCAAAGACTTCACGATCTTCTCTTCCATCTGCTCGCAAGCCCTCATTCATCGCAAGTTGCTGCTGAAGATTGGTTGGGTTCGTCCGCCGCTGAAGACTTGTTGCATTCGTCCACCATTGAAGACTTGTTGGGTTCATCCGCCGCTCAAGGAATGTTGTGTTTGTCCGCCATAGTTCAAAAGTTCGTTGCGCACTTTCTCTGTTTGCAACAGGTTCGGACTGAAGATTTGTTGCGTTCGTCAGCCGCTCAAGGAAAGTTGTGTTCGTCCGCCGTAGTTCAGAAATTTATCATGCACCGTTTCAGCTTGCAACAGGTTCGTCGCACACCGTTATGCTGACAACAGTTTCATGAATTCTTTCGTTTAGTCAGGGCGAAGTTCTCTCTATCTTTTGCCCTATATTTATCTCTTTCCCTTAAGTTGTCGAGTCGATAAGAGTAGTGTTCCAAATTATAGCTTCTCTAACAGACTGAGCTGTGCTGTTCTCTCTCTCTCTCTCTCTTTTAATTTATATCTATGGTAATTTGTTGTCAGTCGGCAGAAGCTGTGAATTGCTTGATTGGCTGTTCTTTTTAATTGCAGCCACTGATATTCCATAGTGGGAATGGAACTTCATTTTGTTTAGCAAGTTAAGGAGGTTTATCATATGTATTTGCAGAACACTTTGGGCATCAACCAGAACATTTAAAACCAGAATTGCTGTCTAATGGTCGTGAACCTTGCTTTCGCTATCCAATTATCGTTGTCGGTATGTTTGGAGTTGGGGCAATGGAAATAGCATATGCAGAGCTGAAGAGGTATGTCCTTGATGTTTAATTCATTGGAGAATTGTAGATTGTCTCTACCGTTTGCTGTTTTAGATTTTCGAAAGGTTTATTTTTATATTATTTTGCATTCATGACCATAGTTGCACATTATAATGAGCATATATACGTATTTTCTTAATGAAGAGATAATACATATTTTCCAATGTATGGTTGGAATATATTGGCTGCTTTGAGAGTTTGCCCTAGTGTGTCGAATAGAAAATCGAATGATCTTTGTACTTGTTTAGAAATTAAACCACTCTCTGTTATCTCAAGTATCTTTCAACAAAATCTAGTATAACAAGTCCACAAAATTCATGTTCAGTAGTTTATGATGCAATTAAATGGATTGTCTCTCTTTTTTATTTGTGAACTCCACCGCTCCATAATTGCATTTTTGGTACCTCTCCAGTGTTTTAAGCATATTGATCTCCAAACACACATAACAACCCATAATATTACATGTTATTTTTCAATTGTTCTTGTTGGTTTTGTGTGATGTTAAAATGTAATAGGGTTTTACTAACATTGTGAAAAAATTTATGTGATGTGGTCTTGCTGCAACATTTGTTTTTAATTTATTTTTAATGTGTAGTTATATGTATGGATTGGTTGCAATTCTGCAAAATTTAGAAATGTGTAGTTATTTTTAATGACGTGTAGTTATATGTATGGATTGTTTATGGAACTACAGATATTGTCTTTCTCAAATGCGTTTCATAGGGGTTCAAGTTTATGTTCACAACTTCATGGAAGGAGAAAGAATGATGAGAATCTTCAACTACAAAACCCGAAAGCATAAATGTGTAATGTTTTTTCTTCTCCACTTTTAGGTTTTTCATTTGCTTTAGCCTATGTTCTCTTAAAGAAGTTATTAATTTTGTTTAAAACAAAGTCTTTTTTTTTTTTTTTAAAAAAGGG

mRNA sequence

ATGTTTAGAGTTCACGATTCTCTTCCCCAAATTTCCTCTTTTCCCCCAAAGACTTCACGATCTTCTCTTCCATCTGCTCGCAAGCCCTCATTCATCGCAAGTTGCTGCTGAAGATTGGTTGGGTTCGTCCGCCGCTGAAGACTTGTTGCATTCGTCCACCATTGAAGACTTGTTGGGTTCATCCGCCGCTCAAGGAATGTTGTGTTTGTCCGCCATAGTTCAAAAGTTCGTTGCGCACTTTCTCTGTTTGCAACAGGTTCGGACTGAAGATTTGTTGCGTTCGTCAGCCGCTCAAGGAAAGTTGTGTTCGTCCGCCGTAGTTCAGAAATTTATCATGCACCGTTTCAGCTTGCAACAGCCACTGATATTCCATAGTGGGAATGGAACTTCATTTTGTTTAGCAAAACACTTTGGGCATCAACCAGAACATTTAAAACCAGAATTGCTGTCTAATGGTCGTGAACCTTGCTTTCGCTATCCAATTATCGTTGTCGGTATGTTTGGAGTTGGGGCAATGGAAATAGCATATGCAGAGCTGAAGAGATTGTCTCTACCGTTTGCTGTTTTAGATTTTCGAAAGATATTGTCTTTCTCAAATGCGTTTCATAGGGGTTCAAGTTTATGTTCACAACTTCATGGAAGGAGAAAGAATGATGAGAATCTTCAACTACAAAACCCGAAAGCATAAATGTGTAATGTTTTTTCTTCTCCACTTTTAGGTTTTTCATTTGCTTTAGCCTATGTTCTCTTAAAGAAGTTATTAATTTTGTTTAAAACAAAGTCTTTTTTTTTTTTTTTAAAAAAGGG

Coding sequence (CDS)

TGTTTAGAGTTCACGATTCTCTTCCCCAAATTTCCTCTTTTCCCCCAAAGACTTCACGATCTTCTCTTCCATCTGCTCGCAAGCCCTCATTCATCGCAAGTTGCTGCTGAAGATTGGTTGGGTTCGTCCGCCGCTGAAGACTTGTTGCATTCGTCCACCATTGAAGACTTGTTGGGTTCATCCGCCGCTCAAGGAATGTTGTGTTTGTCCGCCATAGTTCAAAAGTTCGTTGCGCACTTTCTCTGTTTGCAACAGGTTCGGACTGAAGATTTGTTGCGTTCGTCAGCCGCTCAAGGAAAGTTGTGTTCGTCCGCCGTAGTTCAGAAATTTATCATGCACCGTTTCAGCTTGCAACAGCCACTGATATTCCATAGTGGGAATGGAACTTCATTTTGTTTAGCAAAACACTTTGGGCATCAACCAGAACATTTAAAACCAGAATTGCTGTCTAATGGTCGTGAACCTTGCTTTCGCTATCCAATTATCGTTGTCGGTATGTTTGGAGTTGGGGCAATGGAAATAGCATATGCAGAGCTGAAGAGATTGTCTCTACCGTTTGCTGTTTTAGATTTTCGAAAGATATTGTCTTTCTCAAATGCGTTTCATAGGGGTTCAAGTTTATGTTCACAACTTCATGGAAGGAGAAAGAATGATGAGAATCTTCAACTACAAAACCCGAAAGCATAA

Protein sequence

CLEFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSAAQGMLCLSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLIFHSGNGTSFCLAKHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKRLSLPFAVLDFRKILSFSNAFHRGSSLCSQLHGRRKNDENLQLQNPKA
Homology
[Close]
BLAST of MELO3C034833 vs. NCBI nr
Match: TYK00999.1 (ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-53
Identity = 127/180 (70.56%), Postives = 134/180 (74.44%), Query Frame = 0 

Query: 3   EFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62
           +FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA
Sbjct: 3   KFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62

Query: 63  AQGMLCLSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLI 122
           AQGMLCLSAIVQ                  RS             +K +  R S +   I
Sbjct: 63  AQGMLCLSAIVQN-----------------RS-------------RKVVFVRRSSE---I 122

Query: 123 FHSGNGTSFCLA-KHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
           +H+     F LA +HFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR
Sbjct: 123 YHA----PFQLATEHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 145

[Close]
BLAST of MELO3C034833 vs. NCBI nr
Match: KAA0042415.1 (ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-53
Identity = 127/180 (70.56%), Postives = 134/180 (74.44%), Query Frame = 0 

Query: 3   EFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62
           +FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA
Sbjct: 3   KFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62

Query: 63  AQGMLCLSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLI 122
           AQGMLCLSAIVQ                  RS             +K +  R S +   I
Sbjct: 63  AQGMLCLSAIVQN-----------------RS-------------RKVVFVRRSSE---I 122

Query: 123 FHSGNGTSFCLA-KHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
           +H+     F LA +HFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR
Sbjct: 123 YHA----PFQLATEHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 145

[Close]
BLAST of MELO3C034833 vs. NCBI nr
Match: KAA0061174.1 (ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. makuwa] >TYK29934.1 ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-37
Identity = 101/173 (58.38%), Postives = 108/173 (62.43%), Query Frame = 0 

Query: 9   PKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSAAQGMLC 68
           P+   FPQRLHDLLF LL SPHS QVAAEDWL SSAAEDLLHSS IEDLLGSSAA G   
Sbjct: 9   PQISSFPQRLHDLLFRLLVSPHSLQVAAEDWLRSSAAEDLLHSSAIEDLLGSSAALGKFV 68

Query: 69  LSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLIFHSGNG 128
                  FV     +  VR    +  +  Q    SSA V +F+ HR              
Sbjct: 69  ------AFVRRSRKVVFVRRSLEICHAPFQLATGSSAAVPRFVAHR-------------- 128

Query: 129 TSFCLAKHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
            S C  +HFGHQPEHLKP LLSNGREPCF Y  IVV M GVGAMEIAYAELKR
Sbjct: 129 -SAC-NRHFGHQPEHLKPGLLSNGREPCFLYQAIVVDMLGVGAMEIAYAELKR 159

[Close]
BLAST of MELO3C034833 vs. NCBI nr
Match: KAA0036721.1 (alpha-mannosidase [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-27
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 4  FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSAA 63
          FTILFPKFPLFPQRLHDLLF LLA+PHSSQV  EDWL SSA E+LLHSS  EDLLGSSAA
Sbjct: 4  FTILFPKFPLFPQRLHDLLFRLLANPHSSQVVDEDWLRSSATENLLHSSANEDLLGSSAA 63

Query: 64 QGMLCLSAIVQKFVAHFLCLQQ 86
          QG LC SAIVQKFVAH+ CLQQ
Sbjct: 64 QGKLCSSAIVQKFVAHYFCLQQ 85

[Close]
BLAST of MELO3C034833 vs. NCBI nr
Match: XP_038882484.1 (26S proteasome subunit RPT4 isoform X1 [Benincasa hispida])

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-12
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0 

Query: 135 KHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKRLSL 185
           +HF HQPEHLKP  LSNGREPCF YP I+ GMFGVGAMEIAYAE +  S+
Sbjct: 35  RHFRHQPEHLKPGSLSNGREPCFLYPAIIAGMFGVGAMEIAYAEAEESSV 84

[Close]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match: A0A5D3BSD4 (ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001990 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 127/180 (70.56%), Postives = 134/180 (74.44%), Query Frame = 0 

Query: 3   EFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62
           +FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA
Sbjct: 3   KFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62

Query: 63  AQGMLCLSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLI 122
           AQGMLCLSAIVQ                  RS             +K +  R S +   I
Sbjct: 63  AQGMLCLSAIVQN-----------------RS-------------RKVVFVRRSSE---I 122

Query: 123 FHSGNGTSFCLA-KHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
           +H+     F LA +HFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR
Sbjct: 123 YHA----PFQLATEHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 145

[Close]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match: A0A5A7TLV4 (ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold943G00290 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 127/180 (70.56%), Postives = 134/180 (74.44%), Query Frame = 0 

Query: 3   EFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62
           +FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA
Sbjct: 3   KFTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSA 62

Query: 63  AQGMLCLSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLI 122
           AQGMLCLSAIVQ                  RS             +K +  R S +   I
Sbjct: 63  AQGMLCLSAIVQN-----------------RS-------------RKVVFVRRSSE---I 122

Query: 123 FHSGNGTSFCLA-KHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
           +H+     F LA +HFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR
Sbjct: 123 YHA----PFQLATEHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 145

[Close]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match: A0A5D3E234 (ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00220 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 101/173 (58.38%), Postives = 108/173 (62.43%), Query Frame = 0 

Query: 9   PKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSAAQGMLC 68
           P+   FPQRLHDLLF LL SPHS QVAAEDWL SSAAEDLLHSS IEDLLGSSAA G   
Sbjct: 9   PQISSFPQRLHDLLFRLLVSPHSLQVAAEDWLRSSAAEDLLHSSAIEDLLGSSAALGKFV 68

Query: 69  LSAIVQKFVAHFLCLQQVRTEDLLRSSAAQGKLCSSAVVQKFIMHRFSLQQPLIFHSGNG 128
                  FV     +  VR    +  +  Q    SSA V +F+ HR              
Sbjct: 69  ------AFVRRSRKVVFVRRSLEICHAPFQLATGSSAAVPRFVAHR-------------- 128

Query: 129 TSFCLAKHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAELKR 182
            S C  +HFGHQPEHLKP LLSNGREPCF Y  IVV M GVGAMEIAYAELKR
Sbjct: 129 -SAC-NRHFGHQPEHLKPGLLSNGREPCFLYQAIVVDMLGVGAMEIAYAELKR 159

[Close]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match: A0A5A7T589 (Alpha-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1244G00050 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.9e-28
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 4  FTILFPKFPLFPQRLHDLLFHLLASPHSSQVAAEDWLGSSAAEDLLHSSTIEDLLGSSAA 63
          FTILFPKFPLFPQRLHDLLF LLA+PHSSQV  EDWL SSA E+LLHSS  EDLLGSSAA
Sbjct: 4  FTILFPKFPLFPQRLHDLLFRLLANPHSSQVVDEDWLRSSATENLLHSSANEDLLGSSAA 63

Query: 64 QGMLCLSAIVQKFVAHFLCLQQ 86
          QG LC SAIVQKFVAH+ CLQQ
Sbjct: 64 QGKLCSSAIVQKFVAHYFCLQQ 85

[Close]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match: A0A0A0KL52 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G512920 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 40/54 (74.07%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 125 SGNGTSFCLAKHFGHQPEHLKPELLSNGREPCFRYPIIVVGMFGVGAMEIAYAE 179
           S    SF L +HFGHQPEH KP  LSNGREPCF YP IV GM GVGAMEIAYAE
Sbjct: 26  SSASQSFYL-RHFGHQPEHFKPGSLSNGREPCFLYPAIVAGMVGVGAMEIAYAE 78

The following BLAST results are available for this feature:
BLAST of MELO3C034833 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK00999.12.2e-5370.56ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. ma... [more]
KAA0042415.12.2e-5370.56ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. ma... [more]
KAA0061174.14.9e-3758.38ATPase family AAA domain-containing protein 1-B isoform X1 [Cucumis melo var. ma... [more]
KAA0036721.11.2e-2784.15alpha-mannosidase [Cucumis melo var. makuwa][more]
XP_038882484.11.9e-1274.0026S proteasome subunit RPT4 isoform X1 [Benincasa hispida][more]
BLAST of MELO3C034833 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BSD41.1e-5370.56ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. ... [more]
A0A5A7TLV41.1e-5370.56ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. ... [more]
A0A5D3E2342.4e-3758.38ATPase family AAA domain-containing protein 1-B isoform X1 OS=Cucumis melo var. ... [more]
A0A5A7T5895.9e-2884.15Alpha-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1244G0... [more]
A0A0A0KL521.2e-1274.07AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G512920 PE=3 SV... [more]
BLAST of MELO3C034833 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034833.1MELO3C034833.1mRNA