MELO3C034800 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034800
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NBS-LRR type resistance protein
Location	chr09: 13662576 .. 13664325 (+)
RNA-Seq Expression	MELO3C034800
Synteny	MELO3C034800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCCCTGACACGTTTTCCGGAGGTATAGGCCGGGAAGCGAGCTCGTTGGAGGGAAAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAGTGGTGAACGCTTGTCCGATGTCAGAAACCATTGGAAATGCACTTGCAGCGAAGGAAACGGGCTAAGCTCGAGGACTTCCGGTGTTCGTCCCATGGAATTGCGAGCGAGAATCCCCCGGACTTAGATTTCTCGTCCTTGGGTAAAAAGCGGTCCCCCGATGGTTTCTTCCCTTTGCTTTGTAATTGTTATAAGTCTTTCAATCTTTGGGGCTCGTACTCCAAATAATTCAACCCACACTCCTCGCATGCTCCCCGACACGTTTCCTCAATGTATAGGTCGGCAAGCGAACTCGTTGGAGGGAGAACTGTGGTGCGACCCGAAACGGTCCAAAAGATGGCCAATGCTTTCAACGAGTGGCGAATGCTCGTTTGGTGTCAGAAACCACTAGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCAAGGACATCCGATGTTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGACTCAGTGTTCTTCCCTTTGTTCCCTTTGCTCCGTATAGGTCATAAGTCTTTCGATCTTCAGGGTTCATACTCTGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACTAGTTTTCCAGAGGTATAGGCGGATAAGCGAGATCGTTGGAGGGAGAACTTTGGTGCGACCCAAAACTGTCCAAAAGGTGGCCAATGCTTCCAACGAGTGGTGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACAGGTTGAGCTCGAGGACTTCGGAAGCTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGACTCAGTTTTTTATACTTGGGCAAAAAGCGGTCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCATTCGATATTCGGAGCTCGTACTCCGAGGACTTCAACCCACACTTATGGCATGCTTCCTGACAAGTTTCTAGAGGTATAGGCCGGGAAGCAAGCTCGTTGGAGGGAAAACTGTGGTGCGACCCAAAACGATCCAAAACATGGCCAATGCTTCAAACGAGTGGCGAACGCTGGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCAAAGGAAACAGGCTGAGCTCGAGGACTTCCGGTGCTCGTCCCAAGAAAACGCGAGCGAGAATTCCCCGGACTTAGTTTTCTCGTCCTGGGGCAAAAAGCGGTCCCCCGACGGTTTCTTCCCATTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTAACACGTTTTCCGGAGGTATAGGTCCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGATGCTCGTCCCAAGAAAACACGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGTCAAAAGCAGTCCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTTGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTTCCTGA

mRNA sequence

GCTCCCTGACACGTTTTCCGGAGGTATAGGCCGGGAAGCGAGCTCGTTGGAGGGAAAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAGTGGTGAACGCTTGTCCGATGTCAGAAACCATTGGAAATGCACTTGCAGCGAAGGAAACGGGCTAAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAACGCGAGCGAGAATTCCCCGGACTTAGTTTTCTCGTCCTGGGGCAAAAAGCGGTCCCCCGACGGTTTCTTCCCATTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTAACACGTTTTCCGGAGGTATAGGTCCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGATGCTCGTCCCAAGAAAACACGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGTCAAAAGCAGTCCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTTGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTTCCTGA

Coding sequence (CDS)

ATGCTCCCTAACACGTTTTCCGGAGGTATAGGTCCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGATGCTCGTCCCAAGAAAACACGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGTCAAAAGCAGTCCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTTGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTTCCTGA

Protein sequence

MLPNTFSGGIGPGSELVGGRTVVRPKTVQKMADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPDGFFPLLRIGHKSFDLWGSYSEDFNPHSWHAS

Homology

[Close]

BLAST of MELO3C034800 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-36
Identity = 80/90 (88.89%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 13  GSELVGGRTVVRPKTVQKMADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTS 72
           GSELVGGRTVVR KTVQKMA+ASNEWR LVRCQKPLEMHLQRRKR ELEDFRCSSQEN S
Sbjct: 147 GSELVGGRTVVRHKTVQKMANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVS 206

Query: 73  ENAPDSVFSSWVKSSPPDGFFPLLRIGHKS 103
           ENAPDS FSSW K   PDGFFPLLRIGHKS
Sbjct: 207 ENAPDSAFSSWGKKRSPDGFFPLLRIGHKS 236

[Close]

BLAST of MELO3C034800 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-32
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 31  MADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPD 90
           MA+ASNEW+TLVRCQKPLEM+LQRRK+ EL+DF CSSQEN S+NAPDS FSSW K   P 
Sbjct: 1   MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60

Query: 91  GFFPLLRIGHKSFDLWGSYSEDFNPHSWHA 121
           GFF LLRIGHKSFDL GSY EDFN HSWH+
Sbjct: 61  GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90

[Close]

BLAST of MELO3C034800 vs. NCBI nr
Match: KAA0040927.1 (hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK10610.1 hypothetical protein E5676_scaffold315G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30
Identity = 79/119 (66.39%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 14  SELVGGRTVVRPKTVQKMADASNEWRTLVRCQKPLEMHLQRRKRAELED----------- 73
           S+LVG RT VR K VQK+ +AS EWRTLVRCQKPL+MHLQ+RK AELED           
Sbjct: 267 SKLVGSRTKVRLKIVQKLGNASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRV 326

Query: 74  ----FRCSSQENTSENAPDSVFSSWVKSSPPDGFFPLLRIGHKSFDLWGSYSEDFNPHS 118
               FRCSS EN SENA DSVFSS  +    D FFPLLRIGH+SFDL GSYSEDFNPHS
Sbjct: 327 ELDVFRCSSLENASENALDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPHS 385

[Close]

BLAST of MELO3C034800 vs. NCBI nr
Match: KAA0035524.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 5.1e-25
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 31  MADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPD 90
           M DASNEWRTLVRCQKPLEMHLQ+RKRAELEDF   SQENTSENA + VFSSW K   P+
Sbjct: 1   MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60

Query: 91  GFFPLLRIGHKSFDL 106
           GFFPL RIGHKSFDL
Sbjct: 61  GFFPLFRIGHKSFDL 75

[Close]

BLAST of MELO3C034800 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 9.6e-24
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 52   LQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPDGFFPLLRIGHKSFDLWGSYSE 111
            ++RR RA+L+DFRCSSQEN SEN  DSVFSSW K   PDGFFPLLRIGHKSFDL GSYSE
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076

Query: 112  DFNPHSWHA 121
            DFNPHSWHA
Sbjct: 1077 DFNPHSWHA 1085

[Close]

BLAST of MELO3C034800 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.2e-37
Identity = 80/90 (88.89%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 13  GSELVGGRTVVRPKTVQKMADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTS 72
           GSELVGGRTVVR KTVQKMA+ASNEWR LVRCQKPLEMHLQRRKR ELEDFRCSSQEN S
Sbjct: 147 GSELVGGRTVVRHKTVQKMANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVS 206

Query: 73  ENAPDSVFSSWVKSSPPDGFFPLLRIGHKS 103
           ENAPDS FSSW K   PDGFFPLLRIGHKS
Sbjct: 207 ENAPDSAFSSWGKKRSPDGFFPLLRIGHKS 236

[Close]

BLAST of MELO3C034800 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.6e-32
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 31  MADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPD 90
           MA+ASNEW+TLVRCQKPLEM+LQRRK+ EL+DF CSSQEN S+NAPDS FSSW K   P 
Sbjct: 1   MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60

Query: 91  GFFPLLRIGHKSFDLWGSYSEDFNPHSWHA 121
           GFF LLRIGHKSFDL GSY EDFN HSWH+
Sbjct: 61  GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90

[Close]

BLAST of MELO3C034800 vs. ExPASy TrEMBL
Match: A0A5D3CGX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00560 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.8e-31
Identity = 79/119 (66.39%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 14  SELVGGRTVVRPKTVQKMADASNEWRTLVRCQKPLEMHLQRRKRAELED----------- 73
           S+LVG RT VR K VQK+ +AS EWRTLVRCQKPL+MHLQ+RK AELED           
Sbjct: 267 SKLVGSRTKVRLKIVQKLGNASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRV 326

Query: 74  ----FRCSSQENTSENAPDSVFSSWVKSSPPDGFFPLLRIGHKSFDLWGSYSEDFNPHS 118
               FRCSS EN SENA DSVFSS  +    D FFPLLRIGH+SFDL GSYSEDFNPHS
Sbjct: 327 ELDVFRCSSLENASENALDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPHS 385

[Close]

BLAST of MELO3C034800 vs. ExPASy TrEMBL
Match: A0A5D3E5W4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002550 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 31  MADASNEWRTLVRCQKPLEMHLQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPD 90
           M DASNEWRTLVRCQKPLEMHLQ+RKRAELEDF   SQENTSENA + VFSSW K   P+
Sbjct: 1   MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60

Query: 91  GFFPLLRIGHKSFDL 106
           GFFPL RIGHKSFDL
Sbjct: 61  GFFPLFRIGHKSFDL 75

[Close]

BLAST of MELO3C034800 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-24
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 52   LQRRKRAELEDFRCSSQENTSENAPDSVFSSWVKSSPPDGFFPLLRIGHKSFDLWGSYSE 111
            ++RR RA+L+DFRCSSQEN SEN  DSVFSSW K   PDGFFPLLRIGHKSFDL GSYSE
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076

Query: 112  DFNPHSWHA 121
            DFNPHSWHA
Sbjct: 1077 DFNPHSWHA 1085

The following BLAST results are available for this feature:

BLAST of MELO3C034800 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22521.1	1.7e-36	88.89	uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]	[more]
KAA0057641.1	7.4e-32	77.78	hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]	[more]
KAA0040927.1	1.8e-30	66.39	hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK1061...	[more]
KAA0035524.1	5.1e-25	81.33	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR t...	[more]
KAA0062888.1	9.6e-24	81.16	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]

BLAST of MELO3C034800 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DFP2	8.2e-37	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UVV0	3.6e-32	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CGX3	8.8e-31	66.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E5W4	2.5e-25	81.33	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V5J2	4.7e-24	81.16	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]

BLAST of MELO3C034800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034800.1	MELO3C034800.1	mRNA