MELO3C034764 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034764
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr10: 25094160 .. 25094310 (+)
RNA-Seq Expression	MELO3C034764
Synteny	MELO3C034764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTTATGCACGTGTATGACACTACAAGAAAATGGAGCATTCCCGACGCCGAAAAGCACGTCGGCATAAAGAACGTCGGGAATAAGGGCTTTCCCGACGCCGTCAACAACGCGTCGGGAGATGCGTCGGGAAAACTATCTTTCCCGACGC

mRNA sequence

AGATTTATGCACGTGTATGACACTACAAGAAAATGGAGCATTCCCGACGCCGAAAAGCACGTCGGCATAAAGAACGTCGGGAATAAGGGCTTTCCCGACGCCGTCAACAACGCGTCGGGAGATGCGTCGGGAAAACTATCTTTCCCGACGC

Coding sequence (CDS)

ATGCACGTGTATGACACTACAAGAAAATGGAGCATTCCCGACGCCGAAAAGCACGTCGGCATAAAGAACGTCGGGAATAAGGGCTTTCCCGACGCCGTCAACAACGCGTCGGGAGATGCGTCGGGAAAACTATCTTTCCCGACG

Protein sequence

MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT

Homology

[Close]

BLAST of MELO3C034764 vs. NCBI nr
Match: TYK28867.1 (uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1  MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
          MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT
Sbjct: 1  MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 48

[Close]

BLAST of MELO3C034764 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 9.4e-15
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6  TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
          TTRKW+IPDAEKHVGIKNVGNKGFPDAVNNASGDASGK SFPT
Sbjct: 3  TTRKWNIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKQSFPT 45

[Close]

BLAST of MELO3C034764 vs. NCBI nr
Match: TYJ96549.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKNVGNKGFPDA+NNASGDASGK SFPT
Sbjct: 71  TTRKWSIPDAEKHVGIKNVGNKGFPDALNNASGDASGKPSFPT 113

[Close]

BLAST of MELO3C034764 vs. NCBI nr
Match: KAA0065811.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKNVGNKGFPDA+NNASGDASGK SFPT
Sbjct: 133 TTRKWSIPDAEKHVGIKNVGNKGFPDALNNASGDASGKPSFPT 175

[Close]

BLAST of MELO3C034764 vs. NCBI nr
Match: KAA0055457.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKN+GNKGFPDA+NNASGDASGK SFPT
Sbjct: 73  TTRKWSIPDAEKHVGIKNIGNKGFPDALNNASGDASGKPSFPT 115

[Close]

BLAST of MELO3C034764 vs. ExPASy TrEMBL
Match: A0A5D3DY98 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00070 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1  MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
          MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT
Sbjct: 1  MHVYDTTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 48

[Close]

BLAST of MELO3C034764 vs. ExPASy TrEMBL
Match: A0A5D3BA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001580 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6  TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
          TTRKW+IPDAEKHVGIKNVGNKGFPDAVNNASGDASGK SFPT
Sbjct: 3  TTRKWNIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKQSFPT 45

[Close]

BLAST of MELO3C034764 vs. ExPASy TrEMBL
Match: A0A5A7VJF5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G001130 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-15
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKNVGNKGFPDA+NNASGDASGK SFPT
Sbjct: 133 TTRKWSIPDAEKHVGIKNVGNKGFPDALNNASGDASGKPSFPT 175

[Close]

BLAST of MELO3C034764 vs. ExPASy TrEMBL
Match: A0A5D3BBZ9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002070 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-15
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKNVGNKGFPDA+NNASGDASGK SFPT
Sbjct: 71  TTRKWSIPDAEKHVGIKNVGNKGFPDALNNASGDASGKPSFPT 113

[Close]

BLAST of MELO3C034764 vs. ExPASy TrEMBL
Match: A0A5A7ULK1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00290 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-15
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 6   TTRKWSIPDAEKHVGIKNVGNKGFPDAVNNASGDASGKLSFPT 49
           TTRKWSIPDAEKHVGIKN+GNKGFPDA+NNASGDASGK SFPT
Sbjct: 73  TTRKWSIPDAEKHVGIKNIGNKGFPDALNNASGDASGKPSFPT 115

The following BLAST results are available for this feature:

BLAST of MELO3C034764 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28867.1	2.2e-19	100.00	uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]	[more]
TYJ95864.1	9.4e-15	95.35	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
TYJ96549.1	1.2e-14	95.35	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0065811.1	1.2e-14	95.35	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0055457.1	1.6e-14	93.02	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034764 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DY98	1.1e-19	100.00	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BA83	4.6e-15	95.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VJF5	6.0e-15	95.35	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BBZ9	6.0e-15	95.35	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7ULK1	7.8e-15	93.02	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C034764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034764.1	MELO3C034764.1	mRNA