MELO3C034724 (gene) Melon (DHL92) v4

Overview
NameMELO3C034724
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCharged multivesicular body protein 7 isoform X1
Locationchr11: 12784968 .. 12785300 (-)
RNA-Seq ExpressionMELO3C034724
SyntenyMELO3C034724
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCTCTCTTCTCTCCATCGAGATCTCCGGCGAAAATCTCCCTCCGTCCGTCGAAGCTGCCACCGTCACCTTAGTTCTATTTCAAGCTTCTGTTTGTCGTTAGTCCAAGCCACCACATCCTGAGTCGCTTCTCTTCCCGTCAGCCATCTCCCCTGCATCGCGACGTCTGAATCTAAAGCAAGTGGATTGTGTCTGCTCCAATCGGTGTTTGTCCACGAAGTTCTAACCGCCATTGTCGCATCTCCACAAACCCAACCGCTGCCATCACGATCTCTTATTCGCATGGAGCTTGTTGCACCATCCATCCTTCTCCGTAGCAGGCTGCTACACCAG

mRNA sequence

TGCCTCTCTTCTCTCCATCGAGATCTCCGGCGAAAATCTCCCTCCGTCCGTCGAAGCTGCCACCGTCACCTTAGTTCTATTTCAAGCTTCTGAAGTTCTAACCGCCATTGTCGCATCTCCACAAACCCAACCGCTGCCATCACGATCTCTTATTCGCATGGAGCTTGTTGCACCATCCATCCTTCTCCGTAGCAGGCTGCTACACCAG

Coding sequence (CDS)

GCCTCTCTTCTCTCCATCGAGATCTCCGGCGAAAATCTCCCTCCGTCCGTCGAAGCTGCCACCGTCACCTTAGTTCTATTTCAAGCTTCTGAAGTTCTAACCGCCATTGTCGCATCTCCACAAACCCAACCGCTGCCATCACGATCTCTTATTCGCATGGAGCTTGTTGCACCATCCATCCTTCTCCGTAGCAGGCTGCTACACCAG

Protein sequence

ASLLSIEISGENLPPSVEAATVTLVLFQASEVLTAIVASPQTQPLPSRSLIRMELVAPSILLRSRLLHQ
Homology
[Close]
BLAST of MELO3C034724 vs. NCBI nr
Match: TYK03645.1 (charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 8.3e-04
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 31  EVLTAIVASPQTQPLPSRSLIRMELVAPSILLRSRLLHQ 70
           EV T ++ SP+TQP+PSRS IRMEL+APSILLRS L HQ
Sbjct: 121 EVPTVVLTSPRTQPMPSRSPIRMELIAPSILLRSTLPHQ 159

[Close]
BLAST of MELO3C034724 vs. ExPASy TrEMBL
Match: A0A5D3BX22 (Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00750 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.0e-04
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 31  EVLTAIVASPQTQPLPSRSLIRMELVAPSILLRSRLLHQ 70
           EV T ++ SP+TQP+PSRS IRMEL+APSILLRS L HQ
Sbjct: 121 EVPTVVLTSPRTQPMPSRSPIRMELIAPSILLRSTLPHQ 159

The following BLAST results are available for this feature:
BLAST of MELO3C034724 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK03645.18.3e-0471.79charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034724 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034724 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BX224.0e-0471.79Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
BLAST of MELO3C034724 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034724.1MELO3C034724.1mRNA