Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTAAAAGCATTGACATGTCAGATGATGCAAATGACCTTGATGCAAAGAAGAAAATAGACAAGTTCTAGAAGAAGAAGTTGAAATAGAGGACTTGACAATAGAAAAATAAGATAAGGTAAAAGGCATCTACTTTTATTTTTTTTTTACCCAAATGTTATTTTTTAATTATTAAATATCTGATCAATTAACACTTATGTGCGGCGAAGGTCGATGACGAGAATAAAGATGTTTGTGCATGAATTGGGACTTTGACAAAAGTGAAGGTGAGTATGAATTTGATTTCTATAGTTCACAAATTCTCAGATGCAATATATTAATATGACCATATTTTCTTTCACTATATATTATAGGATGGCACTTCTTGTGACTTACGATTGGGACCAAGGACAATGTAAGGGTGCTGGAACTATTTTCGACTACAACATGGACGGTGACAACGTGAAGGTATCAGTGGACATTGTTGCCGATGGTAATTGCTTCGTCCCTGTTCCAACAAGGGAAAGTAGGACTATGCTTTCCCAAGAAGTCGGTTCACAATTGTTATGGCCTCGTCATTTAGTGATTCCTCTAGACGAGAAGGTAATGTGTTTTTCACATATGGATTTGGTTTAAATATATTTCATATGGATGACATTTTATGTTTGTGGCAGATGAAAAGCATGTACGAAGCTCATCCGAGATTACCGTCGTTGACACTGAATACAAAGAGAGCACCAGTTACACTACGATTATTGCTATGGAAACTTGATTATATTGGGTCGAAGATTTAA
mRNA sequence
ATGGCTTCTAAAAGCATTGACATGTCAGATGATGCAAATGACCTTGATGCAAAGAAGAAAATAGACAAGATGGCACTTCTTGTGACTTACGATTGGGACCAAGGACAATGTAAGGGTGCTGGAACTATTTTCGACTACAACATGGACGGTGACAACGTGAAGGTATCAGTGGACATTGTTGCCGATGGTAATTGCTTCGTCCCTGTTCCAACAAGGGAAAGTAGGACTATGCTTTCCCAAGAAGTCGGTTCACAATTGTTATGGCCTCGTCATTTAGTGATTCCTCTAGACGAGAAGATGAAAAGCATGTACGAAGCTCATCCGAGATTACCGTCGTTGACACTGAATACAAAGAGAGCACCAGTTACACTACGATTATTGCTATGGAAACTTGATTATATTGGGTCGAAGATTTAA
Coding sequence (CDS)
ATGGCTTCTAAAAGCATTGACATGTCAGATGATGCAAATGACCTTGATGCAAAGAAGAAAATAGACAAGATGGCACTTCTTGTGACTTACGATTGGGACCAAGGACAATGTAAGGGTGCTGGAACTATTTTCGACTACAACATGGACGGTGACAACGTGAAGGTATCAGTGGACATTGTTGCCGATGGTAATTGCTTCGTCCCTGTTCCAACAAGGGAAAGTAGGACTATGCTTTCCCAAGAAGTCGGTTCACAATTGTTATGGCCTCGTCATTTAGTGATTCCTCTAGACGAGAAGATGAAAAGCATGTACGAAGCTCATCCGAGATTACCGTCGTTGACACTGAATACAAAGAGAGCACCAGTTACACTACGATTATTGCTATGGAAACTTGATTATATTGGGTCGAAGATTTAA
Protein sequence
MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI
Homology
BLAST of MELO3C034721 vs. NCBI nr
Match:
TYK11865.1 (uncharacterized protein E5676_scaffold177G00130 [Cucumis melo var. makuwa])
HSP 1 Score: 281.6 bits (719), Expect = 3.7e-72
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV 60
MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV
Sbjct: 1 MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV 60
Query: 61 ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA 120
ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA
Sbjct: 61 ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA 120
Query: 121 PVTLRLLLWKLDYIGSKI 139
PVTLRLLLWKLDYIGSKI
Sbjct: 121 PVTLRLLLWKLDYIGSKI 138
BLAST of MELO3C034721 vs. NCBI nr
Match:
KAA0031708.1 (hypothetical protein E6C27_scaffold139G004940 [Cucumis melo var. makuwa])
HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 114/175 (65.14%), Postives = 122/175 (69.71%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKMA----------LLVTYDWD 60
MASKSID SDDAND DAK +K DK+ +T D
Sbjct: 848 MASKSIDTSDDANDHDAKEENRQVLEDLTIEDLTIEKQDKVGEENKYVCASIETLTKVKD 907
Query: 61 QGQCK----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVG 120
C+ GAGTIFDY MDGDNVKVSVD+V DGNCFVPVPTRE RTMLSQEVG
Sbjct: 908 GTSCRLAIGTKDNVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVG 967
Query: 121 SQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
SQLLWPRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 968 SQLLWPRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 1022
BLAST of MELO3C034721 vs. NCBI nr
Match:
KAA0042292.1 (uncharacterized protein E6C27_scaffold824G00870 [Cucumis melo var. makuwa])
HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 113/170 (66.47%), Postives = 121/170 (71.18%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK------------KKIDKMA----------LLVTYDWDQGQCK 60
MASKSID SDDAND DAK +K DK+ +T D C+
Sbjct: 36 MASKSIDTSDDANDHDAKEENRQVLEDLTIEKQDKVGEENKYVCASIETLTKVKDGTSCR 95
Query: 61 ----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVGSQLLW 120
GAGTIFDY MDGDNVKVSVD+V DGNCFV VPTRE RTMLSQEVGSQLLW
Sbjct: 96 LAIGTKDNVFGAGTIFDYYMDGDNVKVSVDMVTDGNCFVLVPTREGRTMLSQEVGSQLLW 155
Query: 121 PRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
PRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 156 PRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 205
BLAST of MELO3C034721 vs. NCBI nr
Match:
KAA0031724.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 107/160 (66.88%), Postives = 116/160 (72.50%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKM--------ALLVTYDWDQG 60
MASKSID SDDAND DAK +K DK+ A + T +
Sbjct: 1119 MASKSIDTSDDANDYDAKEENRQVLEDLTIEDLTIEKQDKVGEENKYVCASIETLTKVKD 1178
Query: 61 QCKGAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIP 120
GAGTIFDY MDGDNVKVSVD+V DGNCFVP+PTRE RTMLSQEVG QLLWPRHLVIP
Sbjct: 1179 NVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVGPQLLWPRHLVIP 1238
Query: 121 LDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIG 136
LDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+ DYIG
Sbjct: 1239 LDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWEFDYIG 1278
BLAST of MELO3C034721 vs. NCBI nr
Match:
KAA0035941.1 (uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa])
HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 111/175 (63.43%), Postives = 121/175 (69.14%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKMA----------LLVTYDWD 60
MASKSID S+DAND DAK +K DK+ +T D
Sbjct: 315 MASKSIDTSNDANDHDAKEENRQVLEDLTIEDLTIEKQDKVGEKNKYVCASIETLTKVKD 374
Query: 61 QGQCK----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVG 120
C+ GAGTI DY MDGDNVKVSVD+V DGNCFVP+PTRE RTMLSQEVG
Sbjct: 375 GTSCRLAIGTKDNVVGAGTILDYYMDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVG 434
Query: 121 SQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
SQLLWPRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 435 SQLLWPRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 489
BLAST of MELO3C034721 vs. ExPASy TrEMBL
Match:
A0A5D3CJZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00130 PE=4 SV=1)
HSP 1 Score: 281.6 bits (719), Expect = 1.8e-72
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV 60
MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV
Sbjct: 1 MASKSIDMSDDANDLDAKKKIDKMALLVTYDWDQGQCKGAGTIFDYNMDGDNVKVSVDIV 60
Query: 61 ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA 120
ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA
Sbjct: 61 ADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRA 120
Query: 121 PVTLRLLLWKLDYIGSKI 139
PVTLRLLLWKLDYIGSKI
Sbjct: 121 PVTLRLLLWKLDYIGSKI 138
BLAST of MELO3C034721 vs. ExPASy TrEMBL
Match:
A0A5A7SM56 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004940 PE=3 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 5.3e-48
Identity = 114/175 (65.14%), Postives = 122/175 (69.71%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKMA----------LLVTYDWD 60
MASKSID SDDAND DAK +K DK+ +T D
Sbjct: 848 MASKSIDTSDDANDHDAKEENRQVLEDLTIEDLTIEKQDKVGEENKYVCASIETLTKVKD 907
Query: 61 QGQCK----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVG 120
C+ GAGTIFDY MDGDNVKVSVD+V DGNCFVPVPTRE RTMLSQEVG
Sbjct: 908 GTSCRLAIGTKDNVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVG 967
Query: 121 SQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
SQLLWPRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 968 SQLLWPRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 1022
BLAST of MELO3C034721 vs. ExPASy TrEMBL
Match:
A0A5A7TFU0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00870 PE=3 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 113/170 (66.47%), Postives = 121/170 (71.18%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK------------KKIDKMA----------LLVTYDWDQGQCK 60
MASKSID SDDAND DAK +K DK+ +T D C+
Sbjct: 36 MASKSIDTSDDANDHDAKEENRQVLEDLTIEKQDKVGEENKYVCASIETLTKVKDGTSCR 95
Query: 61 ----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVGSQLLW 120
GAGTIFDY MDGDNVKVSVD+V DGNCFV VPTRE RTMLSQEVGSQLLW
Sbjct: 96 LAIGTKDNVFGAGTIFDYYMDGDNVKVSVDMVTDGNCFVLVPTREGRTMLSQEVGSQLLW 155
Query: 121 PRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
PRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 156 PRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 205
BLAST of MELO3C034721 vs. ExPASy TrEMBL
Match:
A0A5A7SKM9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 5.8e-47
Identity = 107/160 (66.88%), Postives = 116/160 (72.50%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKM--------ALLVTYDWDQG 60
MASKSID SDDAND DAK +K DK+ A + T +
Sbjct: 1119 MASKSIDTSDDANDYDAKEENRQVLEDLTIEDLTIEKQDKVGEENKYVCASIETLTKVKD 1178
Query: 61 QCKGAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVGSQLLWPRHLVIP 120
GAGTIFDY MDGDNVKVSVD+V DGNCFVP+PTRE RTMLSQEVG QLLWPRHLVIP
Sbjct: 1179 NVVGAGTIFDYYMDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVGPQLLWPRHLVIP 1238
Query: 121 LDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIG 136
LDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+ DYIG
Sbjct: 1239 LDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWEFDYIG 1278
BLAST of MELO3C034721 vs. ExPASy TrEMBL
Match:
A0A5A7T2U8 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001300 PE=3 SV=1)
HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 111/175 (63.43%), Postives = 121/175 (69.14%), Query Frame = 0
Query: 1 MASKSIDMSDDANDLDAK-----------------KKIDKMA----------LLVTYDWD 60
MASKSID S+DAND DAK +K DK+ +T D
Sbjct: 315 MASKSIDTSNDANDHDAKEENRQVLEDLTIEDLTIEKQDKVGEKNKYVCASIETLTKVKD 374
Query: 61 QGQCK----------GAGTIFDYNMDGDNVKVSVDIVADGNCFVPVPTRESRTMLSQEVG 120
C+ GAGTI DY MDGDNVKVSVD+V DGNCFVP+PTRE RTMLSQEVG
Sbjct: 375 GTSCRLAIGTKDNVVGAGTILDYYMDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVG 434
Query: 121 SQLLWPRHLVIPLDEKMKSMYEAHPRLPSLTLNTKRAPVTLRLLLWKLDYIGSKI 139
SQLLWPRHLVIPLDEKMKS+Y+A PRLPSLTLNTKRAPVTLRLLLW+LDYIGSKI
Sbjct: 435 SQLLWPRHLVIPLDEKMKSVYQADPRLPSLTLNTKRAPVTLRLLLWELDYIGSKI 489
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK11865.1 | 3.7e-72 | 100.00 | uncharacterized protein E5676_scaffold177G00130 [Cucumis melo var. makuwa] | [more] |
| KAA0031708.1 | 1.1e-47 | 65.14 | hypothetical protein E6C27_scaffold139G004940 [Cucumis melo var. makuwa] | [more] |
| KAA0042292.1 | 4.2e-47 | 66.47 | uncharacterized protein E6C27_scaffold824G00870 [Cucumis melo var. makuwa] | [more] |
| KAA0031724.1 | 1.2e-46 | 66.88 | transposase [Cucumis melo var. makuwa] | [more] |
| KAA0035941.1 | 2.7e-46 | 63.43 | uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CJZ3 | 1.8e-72 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7SM56 | 5.3e-48 | 65.14 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7TFU0 | 2.0e-47 | 66.47 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7SKM9 | 5.8e-47 | 66.88 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 P... | [more] |
| A0A5A7T2U8 | 1.3e-46 | 63.43 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
