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MELO3C034712 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGAATCAAGACTGTTGTAAAAAAAAATAAAAAAATCTATACATATGGAAGTTCGGGTTAAAACATAAGAGAGAAATTGAAAACTACCTTAAAACCCTAATTAGTTTCAATCAAACATATTAGAACGTACAATATTCAATCCCAAGAAAACCATTGTAGAAAACCCCCCTTATACCCAAAGCAGGGTTTTAGCTTCTTCCCCTCAGCAGCCAGCCAAGAAGTAAGAGTTGGTTCTCTCTTGTTCATATTCCGAAACCAAGAAGAACAACCTTCAGAATCTATCATTTCTTCTCGTAATCAATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTTCGTTGCTTAATGCTTTTGCAACCGTTTTAAGTGCGAAAAGCTTCTGAATCTAGAGCTTTTTGGGTTTTTTTTTTGTTCTCACTAAAAGTAGAGCAACGAAAACAGTGTTCAATCTTCATCTTTATTTCTCTCTTCAGCGTTTTAGTCGTAAAACGTTTCAGTAAAATAACGTTATCTATTTTGCTTGAAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGGTGCATAACTGATAATTTAATTCTTTACTTTCTTGACCTGTTGTGAGCTACATCGAAAGAGAGGACAATATGATGTATTTGTATAGTTTAGAATTTAGACCATATCCATAATTTCAGAATGACTTCTTCCGTGGACAAGAAAGAGTGGATAATTTTCTGGAAGTTGATTTTCTTTTTGCATTTGTTTTTCGTTGGATGAATTTTAGCTTTATAATTTTTTCATGAATCAGGAAAAATAGAGTTTGAGTGGGACTAATAATCAACTATATTTTGAAATAGTGATATCTATATTTAGGTTTAGGGGTCATATTAGCCACAGTGATCTGATGCTTTTGGCGGATGAAATATCTATGCTTGTAATCTATGATTTGGGTAGTTAATGTGTTTGAATCATAAGAAACTACACCATGAAAAGCTTTCTTTTGGCTTAATTTAAGTACTGATGTGTATAAATATTTCAGTAACTTATAAACTTTCATAAGCATTTTATGTGTACATAAATTTGAATGTATTGCGCTAGTTTTGTGATCCCTTTGTTAGACCCCAGTCCTCCAAACTTATAAAAGAAAGGGCAGGAAGGGAAATTCATAGAATAATTCAAAGGGAGAGCTGATGGGAGAGGAAAGAAGCACCGGACAGCCCGCCTTGTATGTGGGTATAATTATAAATAGGGAATGTATTGGGATTGAGGGATTAGGTCAGGATTTTGGTGAAAGTTGCTGTAGGCTTTTTAGGAGAGGTTTCCAGCCTTCTCGAAGGAGCTGGCTTTATTATTTCTTATTACTTTGTTGCATTTACTTTCTGTTCATCATGTGATCACAGTTGGTTTGTTGAACATTTTGGTTATTACATCAATATTACAATAGAGTACTGTCTCTGTTTTGTCATTGTTGGGATTTTCTAAGTTTTAGGTTGAGAATCTTAACAAATTGGTATTAGAGCTTCAACATCCTGGGGCAACACGATCTATAGATAAAAAAACAACTCATCGAAAGAATGAAGTCTAG ATTTTGAATCAAGACTGTTGTAAAAAAAAATAAAAAAATCTATACATATGGAAGTTCGGGTTAAAACATAAGAGAGAAATTGAAAACTACCTTAAAACCCTAATTAGTTTCAATCAAACATATTAGAACGTACAATATTCAATCCCAAGAAAACCATTGTAGAAAACCCCCCTTATACCCAAAGCAGGGTTTTAGCTTCTTCCCCTCAGCAGCCAGCCAAGAAGTAAGAGTTGGTTCTCTCTTGTTCATATTCCGAAACCAAGAAGAACAACCTTCAGAATCTATCATTTCTTCTCGTAATCAATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGGGAGAGCTGATGGGAGAGGAAAGAAGCACCGGACAGCCCGCCTTGTTGAGAATCTTAACAAATTGGTATTAGAGCTTCAACATCCTGGGGCAACACGATCTATAGATAAAAAAACAACTCATCGAAAGAATGAAGTCTAG ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGGTCATTCTCTGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTAATGACTTCCATGCTCTCTATCTCGCGCCATAGCTGCGGTTGGCTCCCCGAAGGGAGAGCTGATGGGAGAGGAAAGAAGCACCGGACAGCCCGCCTTGTTGAGAATCTTAACAAATTGGTATTAGAGCTTCAACATCCTGGGGCAACACGATCTATAGATAAAAAAACAACTCATCGAAAGAATGAAGTCTAG MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEGRADGRGKKHRTARLVENLNKLVLELQHPGATRSIDKKTTHRKNEV Homology
BLAST of MELO3C034712 vs. NCBI nr
Match: XP_016901881.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 2.6e-41 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. NCBI nr
Match: XP_016901879.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 5.7e-41 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. NCBI nr
Match: TYJ97628.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 177.6 bits (449), Expect = 7.5e-41 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. NCBI nr
Match: XP_016901880.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]) HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40 Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of MELO3C034712 vs. NCBI nr
Match: KAA0053231.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 175.3 bits (443), Expect = 3.7e-40 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.8e-06 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy TrEMBL
Match: A0A1S4E0X5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy TrEMBL
Match: A0A1S4E0Y3 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy TrEMBL
Match: A0A5D3BHH0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00120 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.6e-41 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy TrEMBL
Match: A0A1S4E1L9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40 Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of MELO3C034712 vs. ExPASy TrEMBL
Match: A0A5A7UI59 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00160 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MELO3C034712 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MELO3C034712 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MELO3C034712 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MELO3C034712 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of MELO3C034712 vs. TAIR 10
Match: AT1G28395.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1). ) HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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