MELO3C034672 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034672
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Acetyl-CoA carboxylase 1-like
Location	chr01: 24617345 .. 24617476 (-)
RNA-Seq Expression	MELO3C034672
Synteny	MELO3C034672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCAACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCC

mRNA sequence

TGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCAACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCC

Coding sequence (CDS)

GTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCAACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGC

Protein sequence

VGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS

Homology

[Close]

BLAST of MELO3C034672 vs. NCBI nr
Match: TYK26778.1 (heat stress transcription factor A-2d-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 7.2e-14
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 304 GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 345

[Close]

BLAST of MELO3C034672 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 6.1e-13
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVK SIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 301 GKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKS 342

[Close]

BLAST of MELO3C034672 vs. NCBI nr
Match: KAA0051708.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 6.1e-13
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVK SIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 120 GKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKS 161

[Close]

BLAST of MELO3C034672 vs. NCBI nr
Match: KAA0054890.1 (triacylglycerol lipase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 3.0e-12
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVKR IKVPTISNKL D+MIIHGGNMAKS
Sbjct: 226 GKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKS 267

[Close]

BLAST of MELO3C034672 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 5.1e-12
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0


Query: 1   VGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           + K KAFNNTRVKHRVKRSIKVPTISN+LADMMIIHGGNMAKS
Sbjct: 142 IRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKS 184

[Close]

BLAST of MELO3C034672 vs. ExPASy TrEMBL
Match: A0A5D3DTC4 (Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00780 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-14
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 304 GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 345

[Close]

BLAST of MELO3C034672 vs. ExPASy TrEMBL
Match: A0A5A7U8V0 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00940 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-13
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVK SIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 120 GKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKS 161

[Close]

BLAST of MELO3C034672 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-13
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVK SIKVPTISNKLADMMIIHGGNMAKS
Sbjct: 301 GKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKS 342

[Close]

BLAST of MELO3C034672 vs. ExPASy TrEMBL
Match: A0A5A7UHW8 (Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00080 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-12
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 2   GKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           GKGKAFNNTRVKHRVKR IKVPTISNKL D+MIIHGGNMAKS
Sbjct: 226 GKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKS 267

[Close]

BLAST of MELO3C034672 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-12
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0


Query: 1   VGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKS 44
           + K KAFNNTRVKHRVKRSIKVPTISN+LADMMIIHGGNMAKS
Sbjct: 142 IRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKS 184

The following BLAST results are available for this feature:

BLAST of MELO3C034672 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26778.1	7.2e-14	100.00	heat stress transcription factor A-2d-like [Cucumis melo var. makuwa]	[more]
KAA0042207.1	6.1e-13	97.62	triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0051708.1	6.1e-13	97.62	acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa]	[more]
KAA0054890.1	3.0e-12	92.86	triacylglycerol lipase 1-like [Cucumis melo var. makuwa]	[more]
KAA0042275.1	5.1e-12	90.70	transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma...	[more]

BLAST of MELO3C034672 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DTC4	3.5e-14	100.00	Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7U8V0	2.9e-13	97.62	Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TKJ7	2.9e-13	97.62	Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5A7UHW8	1.5e-12	92.86	Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TLF6	2.5e-12	90.70	Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ...	[more]

BLAST of MELO3C034672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018872	Zn-cluster domain	PFAM	PF10533	Plant_zn_clust	coord: 11..31 e-value: 1.5E-7 score: 31.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034672.1	MELO3C034672.1	mRNA