MELO3C034661 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034661
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ATP-binding/protein serine/threonine kinase
Location	chr11: 2934063 .. 2934513 (-)
RNA-Seq Expression	MELO3C034661
Synteny	MELO3C034661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCATAATAATACTAACCCACTAGTCATTTGATATGGTGAAGTCCTCGACAAAGTTCGCTATGTTGTTCTTAATGTTCTTCATTATCTCAGGTATATATATAAATCAATTTCAATCGTTTATGAATAATATTTTTTCCTTTTCGTAATTGTTATCTTATCGTATGACGATTAACAATTAAAATATTTCAGAAACATTCGTGACAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGATTGTGACTGCAAGCTCAATCTATGTTTTTGCCACCCACATGGATTGGAAAGGAAATTTTTTCATAAAGCCTCTCCTGAATATTTGGGAGAAGAAAAGACAATACCGCTCCTTAAAAACTGAATGGAAAATATTAACATATATTCTCTACTCCCAAATTAGATCTACTTACACATCTCTAAA

mRNA sequence

CCAAATCATAATAATACTAACCCACTAGTCATTTGATATGGTGAAGTCCTCGACAAAGTTCGCTATGTTGTTCTTAATGTTCTTCATTATCTCAGAAACATTCGTGACAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGATTGTGACTGCAAGCTCAATCTATGTTTTTGCCACCCACATGGATTGGAAAGGAAATTTTTTCATAAAGCCTCTCCTGAATATTTGGGAGAAGAAAAGACAATACCGCTCCTTAAAAACTGAATGGAAAATATTAACATATATTCTCTACTCCCAAATTAGATCTACTTACACATCTCTAAA

Coding sequence (CDS)

ATGGTGAAGTCCTCGACAAAGTTCGCTATGTTGTTCTTAATGTTCTTCATTATCTCAGAAACATTCGTGACAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGTATTGATTGTTCTGATCCATGGGATTGTGACTGCAAGCTCAATCTATGTTTTTGCCACCCACATGGATTGGAAAGGAAATTTTTTCATAAAGCCTCTCCTGAATATTTGGGAGAAGAAAAGACAATACCGCTCCTTAAAAACTGA

Protein sequence

MVKSSTKFAMLFLMFFIISETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLERKFFHKASPEYLGEEKTIPLLKN

Homology

[Close]

BLAST of MELO3C034661 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 1  MVKSSTKFAMLFLMFFIISETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK A+L LMFFIISE FV +ARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISEMFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 ERKFFHKASPEYLGEEKTIPLLK 84
          E+KF H A PE+L EEKT  LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034661 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 62/78 (79.49%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVKSSTKFAMLFLMFFIISE-TFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFA+ FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LERKFFHKASPEYLGEEK 78
          LE+KF HKA PE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034661 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-04
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 2  VKSSTKFAMLFLMFFIIS---ETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   M+FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]

BLAST of MELO3C034661 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MVKSSTKFAMLFLMFFIISETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK A+L LMFFIISETFV DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 ERKFFHKASPEYLGEEKTIPLLK 84
          E+KF H A PE+L EEKT  LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]

BLAST of MELO3C034661 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.8e-28
Identity = 62/78 (79.49%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVKSSTKFAMLFLMFFIISE-TFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFA+ FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LERKFFHKASPEYLGEEK 78
          LE+KF HKA PE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034661 vs. ExPASy TrEMBL
Match: A0A1R3GI95 (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 2  VKSSTKFAMLFLMFFIIS---ETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          ++ +T   M+FL   +I+        +ARN +NIPCN+  DC DP  C+C++NLCFCHP
Sbjct: 1  MEKTTLMKMIFLAALLINFAGSQVGVEARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

[Close]

BLAST of MELO3C034661 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04
Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 1  MVKSSTKFAMLFLMFFIISE-TFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          M KSS K A++ ++  I S   F  DARNVV IPC +  DC D   CDC  N C C   G
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC--PG 60

Query: 61 LERKFFHKASPEYL 74
           E+ FF KA   +L
Sbjct: 61 EEQDFFTKAITNHL 72

[Close]

BLAST of MELO3C034661 vs. ExPASy TrEMBL
Match: A0A061GY75 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.9e-04
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 1  MVKSSTKFAML-FLMFFIISETFVTDARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 58
          M K S K   L  L+ F +      +ARN +N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 1  MEKFSFKLIFLAALLVFALGLQVGVEARN-INTPCNTVKDCADPIKCECRINLCFCHP 57

The following BLAST results are available for this feature:

BLAST of MELO3C034661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651915.1	6.0e-33	83.13	hypothetical protein Csa_006059 [Cucumis sativus]	[more]
KGN61957.1	1.0e-27	79.49	hypothetical protein Csa_006779 [Cucumis sativus]	[more]
OMO57769.1	2.6e-04	44.07	ATP-binding/protein serine/threonine kinase [Corchorus olitorius]	[more]

BLAST of MELO3C034661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJR0	1.6e-34	85.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1	[more]
A0A0A0LMG3	4.8e-28	79.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1	[more]
A0A1R3GI95	1.3e-04	44.07	ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C...	[more]
A0A2N9FRQ0	1.3e-04	45.95	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1	[more]
A0A061GY75	4.9e-04	46.55	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1	[more]

BLAST of MELO3C034661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034661.1	MELO3C034661.1	mRNA