MELO3C034634 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034634
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Location	chr06: 11194458 .. 11194909 (+)
RNA-Seq Expression	MELO3C034634
Synteny	MELO3C034634

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACACGGTGACATAGTTGAATCATATACATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAATCCAGGTATGATTAGTTTTTTATATCAAATTTAAATTGATTTGCAGATAGATGTGGATAGACCTATATCACAATCTATCTAGATATACCAATATTGGCATCTTTGATATTCTTTCTATTCTTTTTTGTTTGTGCTGATAGAAATGTGTTTTTAATTATTATAGGTACATGCACTGCTTTAGAAATGGATGATAGTGGTCATTTCAGTGCATCAATTAAGGGGTGGAAATATTGTAGACCTATTATTTCTGTCGATAGGACATTTTTGAAG

mRNA sequence

ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACACGGTGACATAGTTGAATCATATACATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAATCCAGGTATGATTAGTTTTTTATATCAAATTTAAATTGATTTGTGGTCATTTCAGTGCATCAATTAAGGGGTGGAAATATTGTAGACCTATTATTTCTGTCGATAGGACATTTTTGAAG

Coding sequence (CDS)

ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACACGGTGACATAGTTGAATCATATACATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAATCCAGGTATGATTAGTTTTTTATATCAAATTTAA

Protein sequence

MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVESNPGMISFLYQI

Homology

[Close]

BLAST of MELO3C034634 vs. NCBI nr
Match: KAA0037108.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK13969.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. NCBI nr
Match: TYK07957.1 (hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKA TNLGV+ISYQK WRAKEHMVKILHGDIVESYTLIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKARTNLGVSISYQKVWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. NCBI nr
Match: KAA0041732.1 (uncharacterized protein E6C27_scaffold67G00700 [Cucumis melo var. makuwa] >TYK08397.1 uncharacterized protein E5676_scaffold654G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 2.3e-25
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLG NISYQKAWRAKEHMVKILH D +ESY LIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGGNISYQKAWRAKEHMVKILHSDTIESYALIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. NCBI nr
Match: KAA0035384.1 (protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 8.7e-25
Identity = 59/68 (86.76%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLGVNISYQKAWR KEHMVKILH D VESY LIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGVNISYQKAWRVKEHMVKILHDDKVESYALIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NP   + L
Sbjct: 79 NPSTCTAL 86

[Close]

BLAST of MELO3C034634 vs. NCBI nr
Match: KAA0063987.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 8.7e-25
Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1   MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
           MSTDRSIPKEIVHKA TNLGVNISYQKAWR KEHMVKILHGD VESY LIPRFFDKLVES
Sbjct: 657 MSTDRSIPKEIVHKARTNLGVNISYQKAWRVKEHMVKILHGDTVESYALIPRFFDKLVES 716

Query: 61  NP 63
           NP
Sbjct: 717 NP 718

[Close]

BLAST of MELO3C034634 vs. ExPASy TrEMBL
Match: A0A5A7T2U4 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001730 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. ExPASy TrEMBL
Match: A0A5D3C7L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00780 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKA TNLGV+ISYQK WRAKEHMVKILHGDIVESYTLIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKARTNLGVSISYQKVWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. ExPASy TrEMBL
Match: A0A5D3C8V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00040 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLG NISYQKAWRAKEHMVKILH D +ESY LIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGGNISYQKAWRAKEHMVKILHSDTIESYALIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTAL 86

[Close]

BLAST of MELO3C034634 vs. ExPASy TrEMBL
Match: A0A5D3BN82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00270 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-25
Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          +STDRSIP+EIVHKA TNLGVNISYQKAWRAKEHMVKILHGD VE+Y LIPRFFDKLVES
Sbjct: 19 ISTDRSIPQEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDTVEAYALIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NPG  + L
Sbjct: 79 NPGTCTTL 86

[Close]

BLAST of MELO3C034634 vs. ExPASy TrEMBL
Match: A0A5D3BZ76 (Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001160 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-25
Identity = 59/68 (86.76%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1  MSTDRSIPKEIVHKAHTNLGVNISYQKAWRAKEHMVKILHGDIVESYTLIPRFFDKLVES 60
          MSTDRSIPKEIVHKAHTNLGVNISYQKAWR KEHMVKILH D VESY LIPRFFDKLVES
Sbjct: 19 MSTDRSIPKEIVHKAHTNLGVNISYQKAWRVKEHMVKILHDDKVESYALIPRFFDKLVES 78

Query: 61 NPGMISFL 69
          NP   + L
Sbjct: 79 NPSTCTAL 86

The following BLAST results are available for this feature:

BLAST of MELO3C034634 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037108.1	3.8e-28	94.12	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK13969.1 prot...	[more]
TYK07957.1	3.5e-26	89.71	hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]	[more]
KAA0041732.1	2.3e-25	86.76	uncharacterized protein E6C27_scaffold67G00700 [Cucumis melo var. makuwa] >TYK08...	[more]
KAA0035384.1	8.7e-25	86.76	protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 ...	[more]
KAA0063987.1	8.7e-25	93.55	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034634 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034634 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2U4	1.8e-28	94.12	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C7L7	1.7e-26	89.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C8V1	1.1e-25	86.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BN82	4.2e-25	85.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BZ76	4.2e-25	86.76	Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C034634 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034634.1	MELO3C034634.1	mRNA