MELO3C034633 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034633
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Glial fibrillary acidic protein-like
Location	chr11: 6698982 .. 6699463 (+)
RNA-Seq Expression	MELO3C034633
Synteny	MELO3C034633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAAGCAAAGAGCAAAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTATGTTAAAGTGTTTCATGTTCAACACGTTCGACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCAGTTGACTGAGGGAATAAGTTGTACATCTATGATTGAAAGTTGACTCTACAACGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGCTAAAGAAACAGATGAAGACAAAAGAAGGTTGGAATTGTATTCCTATCAATTATCTCATCAATCTTGTGCGTGGTTGTTTATCAGGGAAGAAGTTTTTTCTCTCATCGCATTATGTATCTATGGAACAATTATTTTTCCTAGAATTAACGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGG

mRNA sequence

ATGCCGAAGCAAAGAGCAAAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTATGTTAAAGTGTTTCATGTTCAACACGTTCGACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCAGTTGACTGAGGGAATAAGTTGTACATCTATGATTGAAAGTTGACTCTACAACGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGCTAAAGAAACAGATGAAGACAAAAGAAGTTATTTTTCCTAGAATTAACGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGG

Coding sequence (CDS)

ATGCCGAAGCAAAGAGCAAAGTTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTATGTTAAAGTGTTTCATGTTCAACACGTTCGACTTAACTCCTACTATAGAAGAATATCAAGCACTTATTAGCCTACCAGTTGACTGA

Protein sequence

MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALISLPVD

Homology

[Close]

BLAST of MELO3C034633 vs. NCBI nr
Match: TYK28912.1 (hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 2.7e-28
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 6.5e-27
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRAKF KAYGSIGDLLYTTINTSTLQALSHFWDP+LKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. NCBI nr
Match: KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 4.2e-26
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSI DLLYTTINTSTLQALSHFWDP+LKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. NCBI nr
Match: KAA0065295.1 (uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 7.2e-26
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSIGDLLYTTINTSTLQALSHFWDP+LK F FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. NCBI nr
Match: TYK02649.1 (hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 6.8e-24
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           M + R +FTKAYGSIGD+LYTTI+TSTLQALS+FWDPMLKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MLEHRVEFTKAYGSIGDILYTTISTSTLQALSYFWDPMLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. ExPASy TrEMBL
Match: A0A5D3DZ69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3695G00150 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRAKF KAYGSIGDLLYTTINTSTLQALSHFWDP+LKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. ExPASy TrEMBL
Match: A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSI DLLYTTINTSTLQALSHFWDP+LKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. ExPASy TrEMBL
Match: A0A5A7VHI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00080 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           MP+QRA+FTKAYGSIGDLLYTTINTSTLQALSHFWDP+LK F FNTFDLTPTIEEYQALI
Sbjct: 70  MPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

[Close]

BLAST of MELO3C034633 vs. ExPASy TrEMBL
Match: A0A5D3BWX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00610 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1   MPKQRAKFTKAYGSIGDLLYTTINTSTLQALSHFWDPMLKCFMFNTFDLTPTIEEYQALI 60
           M + R +FTKAYGSIGD+LYTTI+TSTLQALS+FWDPMLKCF FNTFDLTPTIEEYQALI
Sbjct: 70  MLEHRVEFTKAYGSIGDILYTTISTSTLQALSYFWDPMLKCFTFNTFDLTPTIEEYQALI 129

Query: 61  SLPVD 66
           SLPVD
Sbjct: 130 SLPVD 134

The following BLAST results are available for this feature:

BLAST of MELO3C034633 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28912.1	2.7e-28	96.92	hypothetical protein E5676_scaffold3695G00150 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	6.5e-27	93.85	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0046606.1	4.2e-26	92.31	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0065295.1	7.2e-26	92.31	uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]	[more]
TYK02649.1	6.8e-24	86.15	hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034633 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZ69	1.3e-28	96.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SUT0	3.2e-27	93.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7TXA1	2.1e-26	92.31	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7VHI3	3.5e-26	92.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BWX8	3.3e-24	86.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C034633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 4..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034633.1	MELO3C034633.1	mRNA