MELO3C034622 (gene) Melon (DHL92) v4

Overview
NameMELO3C034622
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein EMSY-LIKE 3 isoform X2
Locationchr05: 1459875 .. 1460083 (-)
RNA-Seq ExpressionMELO3C034622
SyntenyMELO3C034622
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

mRNA sequence

TGTTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

Coding sequence (CDS)

TTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

Protein sequence

LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPELKKKHRRL
Homology
[Close]
BLAST of MELO3C034622 vs. NCBI nr
Match: TYJ96104.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE
Sbjct: 12 LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 71

Query: 61 LKKKHRRL 69
          LKKKHRRL
Sbjct: 72 LKKKHRRL 79

[Close]
BLAST of MELO3C034622 vs. NCBI nr
Match: KAA0061762.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 8.6e-30
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          LLRRAPWVSVCKGVKE+PVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE
Sbjct: 12 LLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 71

Query: 61 LKKKHRRL 69
          LKKKHRRL
Sbjct: 72 LKKKHRRL 79

[Close]
BLAST of MELO3C034622 vs. NCBI nr
Match: TYK10467.1 (protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-19
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          L RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW RRV+ VY ESPE
Sbjct: 12 LRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWRRVYWVYRESPE 71

Query: 61 LKKKH 66
          LKKKH
Sbjct: 72 LKKKH 76

[Close]
BLAST of MELO3C034622 vs. NCBI nr
Match: KAA0058660.1 (protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-19
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          L RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW RRV+ VY ESPE
Sbjct: 12 LRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWRRVYWVYRESPE 71

Query: 61 LKKKH 66
          LKKKH
Sbjct: 72 LKKKH 76

[Close]
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match: A0A5D3BAX0 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00660 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE
Sbjct: 12 LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 71

Query: 61 LKKKHRRL 69
          LKKKHRRL
Sbjct: 72 LKKKHRRL 79

[Close]
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match: A0A5A7V0Q1 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001400 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-30
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          LLRRAPWVSVCKGVKE+PVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE
Sbjct: 12 LLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 71

Query: 61 LKKKHRRL 69
          LKKKHRRL
Sbjct: 72 LKKKHRRL 79

[Close]
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match: A0A5A7UUE7 (Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001300 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-19
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          L RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW RRV+ VY ESPE
Sbjct: 12 LRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWRRVYWVYRESPE 71

Query: 61 LKKKH 66
          LKKKH
Sbjct: 72 LKKKH 76

[Close]
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match: A0A5D3CES2 (Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001160 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-19
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  LLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPE 60
          L RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW RRV+ VY ESPE
Sbjct: 12 LRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWRRVYWVYRESPE 71

Query: 61 LKKKH 66
          LKKKH
Sbjct: 72 LKKKH 76

The following BLAST results are available for this feature:
BLAST of MELO3C034622 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ96104.13.0e-30100.00dihydropyrimidinase [Cucumis melo var. makuwa][more]
KAA0061762.18.6e-3098.53dihydropyrimidinase [Cucumis melo var. makuwa][more]
TYK10467.15.2e-1980.00protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa][more]
KAA0058660.15.2e-1980.00protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034622 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BAX01.4e-30100.00Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G... [more]
A0A5A7V0Q14.2e-3098.53Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G... [more]
A0A5A7UUE72.5e-1980.00Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3CES22.5e-1980.00Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of MELO3C034622 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034622.1MELO3C034622.1mRNA