MELO3C034620 (gene) Melon (DHL92) v4

Overview
NameMELO3C034620
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 5445879 .. 5446092 (+)
RNA-Seq ExpressionMELO3C034620
SyntenyMELO3C034620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGATCATCATCTCCAATATGAGACGATCATGATCTCCAATATTGACCATCGAGGTGATCATTCATCTCCAATGTGTTATAGCTTCAAGCATGATGATGATAGTACATCTCAGCCTCCAACTCTCCAAATGATGATGGTACAACTCCAAGAGGATGACAATGGTGCAGCTCTACCTCTACCTCTCTAAGATGACAATGACCGTGCAACTTCA

mRNA sequence

AAAAGATCATCATCTCCAATATGAGACGATCATGATCTCCAATATTGACCATCGAGGTGATCATTCATCTCCAATGTGTTATAGCTTCAAGCATGATGATGATAGTACATCTCAGCCTCCAACTCTCCAAATGATGATGGTACAACTCCAAGAGGATGACAATGGTGCAGCTCTACCTCTACCTCTCTAAGATGACAATGACCGTGCAACTTCA

Coding sequence (CDS)

ATGATCTCCAATATTGACCATCGAGGTGATCATTCATCTCCAATGTGTTATAGCTTCAAGCATGATGATGATAGTACATCTCAGCCTCCAACTCTCCAAATGATGATGGTACAACTCCAAGAGGATGACAATGGTGCAGCTCTACCTCTACCTCTCTAA

Protein sequence

MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL
Homology
BLAST of MELO3C034620 vs. NCBI nr
Match: TYK13543.1 (hypothetical protein E5676_scaffold299G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 9.6e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL
Sbjct: 140 MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 191

BLAST of MELO3C034620 vs. NCBI nr
Match: KAA0032079.1 (hypothetical protein E6C27_scaffold223G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 8.1e-20
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           MISNIDHRGDHSSPMCYS KHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL
Sbjct: 107 MISNIDHRGDHSSPMCYSSKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 158

BLAST of MELO3C034620 vs. NCBI nr
Match: KAA0064214.1 (hypothetical protein E6C27_scaffold548G001610 [Cucumis melo var. makuwa] >TYK02814.1 hypothetical protein E5676_scaffold218G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0

Query: 5   IDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           I HRGDHSSPMCYS +H DDSTSQPPTLQMMMVQLQE+D+G ALP PL
Sbjct: 130 IIHRGDHSSPMCYSSEHYDDSTSQPPTLQMMMVQLQENDDGTALPPPL 177

BLAST of MELO3C034620 vs. NCBI nr
Match: KAA0054621.1 (hypothetical protein E6C27_scaffold24G004240 [Cucumis melo var. makuwa] >TYK27583.1 hypothetical protein E5676_scaffold22G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           +IS + HR DHSSPMC+SF+HD+DSTS+P TLQM+ VQL+EDD+GAALPLPL
Sbjct: 143 LISIMLHREDHSSPMCWSFEHDNDSTSRPQTLQMITVQLREDDDGAALPLPL 194

BLAST of MELO3C034620 vs. NCBI nr
Match: TYK00344.1 (hypothetical protein E5676_scaffold1112G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 5.8e-10
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALP 50
           +ISNIDH+ DHSS MC+SF+HD +STSQPPTLQMMM QL++DD+G ALP
Sbjct: 115 IISNIDHQEDHSSLMCFSFEHDGNSTSQPPTLQMMM-QLRKDDDGVALP 162

BLAST of MELO3C034620 vs. ExPASy TrEMBL
Match: A0A5D3CNR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00180 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL
Sbjct: 140 MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 191

BLAST of MELO3C034620 vs. ExPASy TrEMBL
Match: A0A5A7SS76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00490 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-20
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           MISNIDHRGDHSSPMCYS KHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL
Sbjct: 107 MISNIDHRGDHSSPMCYSSKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 158

BLAST of MELO3C034620 vs. ExPASy TrEMBL
Match: A0A5A7VAF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00010 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.1e-13
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0

Query: 5   IDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           I HRGDHSSPMCYS +H DDSTSQPPTLQMMMVQLQE+D+G ALP PL
Sbjct: 130 IIHRGDHSSPMCYSSEHYDDSTSQPPTLQMMMVQLQENDDGTALPPPL 177

BLAST of MELO3C034620 vs. ExPASy TrEMBL
Match: A0A5A7UM54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00590 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-12
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALPLPL 53
           +IS + HR DHSSPMC+SF+HD+DSTS+P TLQM+ VQL+EDD+GAALPLPL
Sbjct: 143 LISIMLHREDHSSPMCWSFEHDNDSTSRPQTLQMITVQLREDDDGAALPLPL 194

BLAST of MELO3C034620 vs. ExPASy TrEMBL
Match: A0A5D3BM44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00030 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 1   MISNIDHRGDHSSPMCYSFKHDDDSTSQPPTLQMMMVQLQEDDNGAALP 50
           +ISNIDH+ DHSS MC+SF+HD +STSQPPTLQMMM QL++DD+G ALP
Sbjct: 115 IISNIDHQEDHSSLMCFSFEHDGNSTSQPPTLQMMM-QLRKDDDGVALP 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK13543.19.6e-21100.00hypothetical protein E5676_scaffold299G00180 [Cucumis melo var. makuwa][more]
KAA0032079.18.1e-2098.08hypothetical protein E6C27_scaffold223G00490 [Cucumis melo var. makuwa][more]
KAA0064214.11.3e-1283.33hypothetical protein E6C27_scaffold548G001610 [Cucumis melo var. makuwa] >TYK028... [more]
KAA0054621.11.1e-1173.08hypothetical protein E6C27_scaffold24G004240 [Cucumis melo var. makuwa] >TYK2758... [more]
TYK00344.15.8e-1073.47hypothetical protein E5676_scaffold1112G00030 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CNR54.6e-21100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SS763.9e-2098.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VAF36.1e-1383.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UM545.1e-1273.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BM442.8e-1073.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034620.1MELO3C034620.1mRNA