MELO3C034617 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034617
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr05: 24025975 .. 24026845 (-)
RNA-Seq Expression	MELO3C034617
Synteny	MELO3C034617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTTTGGGATCCAACATATCCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGCGGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCTCAAGGGAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGTATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAATGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACGTTAGATAAGGAAATGAGGCGAATGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAACAAGAAACACAAATAATGGATTTAGAAGCACATCAAATTTTTATGAGCGAATGATTGGTAATGCATCAACAAATTTTT

mRNA sequence

ATGACAGTTTGGGATCCAACATATCCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGCGGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCTCAAGGGAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGTATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAATGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACGTTAGATAAGGAAATGAGGCGAATGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAACAAGAAACACAAATAATGGATTTAGAAGCACATCAAATTTTTATGAGCGAATGATTGGTAATGCATCAACAAATTTTT

Coding sequence (CDS)

ATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCTCAAGGGAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGTATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAATGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACGTTAGATAAGGAAATGAGGCGAATGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAG

Protein sequence

MRMEICKEDKDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLKNEKQQWGRKMNILKI

Homology

[Close]

BLAST of MELO3C034617 vs. NCBI nr
Match: KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-56
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGK+TSFEQPNQWIEKSIELEEKNRLL
Sbjct: 290 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLL 349

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEK+LETLDKEMRRMNKANRSLK
Sbjct: 350 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLK 409

Query: 130 NEK 133
           NEK
Sbjct: 410 NEK 412

[Close]

BLAST of MELO3C034617 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 110 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 169

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD LEK+LETLDKEMRRMNKANRSLK
Sbjct: 170 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRSLK 229

Query: 130 NEK 133
           NEK
Sbjct: 230 NEK 232

[Close]

BLAST of MELO3C034617 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 219 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 278

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD LEK+LETLDKEMRRMNKANRSLK
Sbjct: 279 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRSLK 338

Query: 130 NEK 133
           NEK
Sbjct: 339 NEK 341

[Close]

BLAST of MELO3C034617 vs. NCBI nr
Match: KAA0061972.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-55
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 141 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 200

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHA YLQNELEKTKS LKNQDKLEKNLETLDKEMRRMNKANRSLK
Sbjct: 201 EQENEKLRKETSQWMDHAAYLQNELEKTKSSLKNQDKLEKNLETLDKEMRRMNKANRSLK 260

Query: 130 NEK 133
           NEK
Sbjct: 261 NEK 263

[Close]

BLAST of MELO3C034617 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 2.5e-55
Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVE GKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 375 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLL 434

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEK+LETLD+EMRRMNKANRSLK
Sbjct: 435 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRSLK 494

Query: 130 NEK 133
           NEK
Sbjct: 495 NEK 497

[Close]

BLAST of MELO3C034617 vs. ExPASy TrEMBL
Match: A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGK+TSFEQPNQWIEKSIELEEKNRLL
Sbjct: 290 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLL 349

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEK+LETLDKEMRRMNKANRSLK
Sbjct: 350 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLK 409

Query: 130 NEK 133
           NEK
Sbjct: 410 NEK 412

[Close]

BLAST of MELO3C034617 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.5e-56
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 110 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 169

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD LEK+LETLDKEMRRMNKANRSLK
Sbjct: 170 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRSLK 229

Query: 130 NEK 133
           NEK
Sbjct: 230 NEK 232

[Close]

BLAST of MELO3C034617 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.5e-56
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 219 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 278

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD LEK+LETLDKEMRRMNKANRSLK
Sbjct: 279 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRSLK 338

Query: 130 NEK 133
           NEK
Sbjct: 339 NEK 341

[Close]

BLAST of MELO3C034617 vs. ExPASy TrEMBL
Match: A0A5A7V188 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002720 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.2e-56
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL
Sbjct: 141 KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 200

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQENEKLRKETSQWMDHA YLQNELEKTKS LKNQDKLEKNLETLDKEMRRMNKANRSLK
Sbjct: 201 EQENEKLRKETSQWMDHAAYLQNELEKTKSSLKNQDKLEKNLETLDKEMRRMNKANRSLK 260

Query: 130 NEK 133
           NEK
Sbjct: 261 NEK 263

[Close]

BLAST of MELO3C034617 vs. ExPASy TrEMBL
Match: A0A5D3DLE9 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00180 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55
Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 10  KDKGHYEGVTSGYEAWQTNKKKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLL 69
           KDKGHYEGVTSGYEAWQ N++KNIIDISREVVERGKETSF+QPNQWIEKS ELEEKNRLL
Sbjct: 84  KDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFKQPNQWIEKSKELEEKNRLL 143

Query: 70  EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 129
           EQEN+KLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK
Sbjct: 144 EQENKKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEMRRMNKANRSLK 203

Query: 130 NEK 133
           NEK
Sbjct: 204 NEK 206

The following BLAST results are available for this feature:

BLAST of MELO3C034617 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066094.1	5.1e-56	95.93	girdin-like [Cucumis melo var. makuwa]	[more]
TYK16558.1	1.1e-55	95.93	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	1.1e-55	95.93	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0061972.1	1.5e-55	95.93	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036941.1	2.5e-55	95.12	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034617 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFL0	2.5e-56	95.93	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=...	[more]
A0A5D3CZ50	5.5e-56	95.93	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	5.5e-56	95.93	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5A7V188	7.2e-56	95.93	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002720 PE...	[more]
A0A5D3DLE9	1.2e-55	95.12	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00180 PE...	[more]

BLAST of MELO3C034617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..138
None	No IPR available	COILS	Coil	Coil	coord: 59..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034617.1	MELO3C034617.1	mRNA