MELO3C034606.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034606.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionATP-binding/protein serine/threonine kinase
Locationchr11: 4176622 .. 4177087 (+)
RNA-Seq ExpressionMELO3C034606.jh1
SyntenyMELO3C034606.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATCACATAATACTCACCCACTAGACATTTAATATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTCTTAATGTTCTTTATTATCTCAGGTATATAAATCCATTTCATTTATTTAATAGATAATTTTTTTTTCTTTTCGCGAATGTTATCTTATCATATGACAAATAATTATTAAAATATTTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTGTTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACTGCTCCTTAAAAATTGAATGGGAAATATTAACATATATTCTCCACTCCCAAATTAGATCTACCTACATAGCTCATAAATTGATAGAAATGTATTTT

mRNA sequence

CCAAATCACATAATACTCACCCACTAGACATTTAATATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTGTTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACTGCTCCTTAAAAATTGAATGGGAAATATTAACATATATTCTCCACTCCCAAATTAGATCTACCTACATAGCTCATAAATTGATAGAAATGTATTTT

Coding sequence (CDS)

ATGGTGAAGTCCTCAACTAAGTTTGCTCTCTTGTTCTTAATGTTCTTTATTATCTCAGAAACATTCGTGGCAGATGCCAGAAATGTCGTAAACATTCCATGCAATAGTCGCATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGCCACCCACATGGATTGGAAAAGAAATTGTTTCACAAAGACTTTCCCGAATATTTGGGAGAAGAAAAGACAACACTGCTCCTTAAAAATTGA

Protein sequence

MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLEKKLFHKDFPEYLGEEKTTLLLKN
Homology
[Close]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 153 bits (386), Expect = 1.87e-46
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISE FVA+ARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISEMFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKLFHKDFPEYLGEEKTTLLLK 83
          EKK  H  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 132 bits (333), Expect = 2.21e-38
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKLFHKDFPEYLGEEK 77
          LEKK  HK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 56.2 bits (134), Expect = 3.51e-08
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLEKKLFH--KDFPE 71
          +ARN+ NIPCN+  DC DP  C+C++NLCFCHP  +     H  KD P+
Sbjct: 27 EARNI-NIPCNTIKDCPDPVKCECRINLCFCHPAAMFVAANHVAKDNPK 74

[Close]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match: EOY32073.1 (Uncharacterized protein TCM_039538 [Theobroma cacao])

HSP 1 Score: 54.3 bits (129), Expect = 1.92e-07
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 57
          +ARN+ N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 26 EARNI-NTPCNTVKDCADPIKCECRMNLCFCHP 57

[Close]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match: EOY32074.1 (Uncharacterized protein TCM_039540 [Theobroma cacao])

HSP 1 Score: 54.3 bits (129), Expect = 1.92e-07
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 57
          +ARN+ N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 26 EARNI-NTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.89e-48
Identity = 74/83 (89.16%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60
          MVKSSTK ALL LMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKLFHKDFPEYLGEEKTTLLLK 83
          EKK  H  FPE+L EEKTT LLK
Sbjct: 61 EKKFLHNAFPEHLREEKTTSLLK 83

[Close]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 1.07e-38
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1  MVKSSTKFALLFLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TKFAL FLM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKLFHKDFPEYLGEEK 77
          LEKK  HK FPE L E++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match: A0A1R3GI95 (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.70e-08
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGLEKKLFH--KDFPE 71
          +ARN+ NIPCN+  DC DP  C+C++NLCFCHP  +     H  KD P+
Sbjct: 27 EARNI-NIPCNTIKDCPDPVKCECRINLCFCHPAAMFVAANHVAKDNPK 74

[Close]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match: A0A061GY75 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.27e-08
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 57
          +ARN+ N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 26 EARNI-NTPCNTVKDCADPIKCECRINLCFCHP 57

[Close]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match: A0A061GRN9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.27e-08
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 25 DARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHP 57
          +ARN+ N PCN+  DC+DP  C+C++NLCFCHP
Sbjct: 26 EARNI-NTPCNTVKDCADPIKCECRMNLCFCHP 57

The following BLAST results are available for this feature:
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651915.11.87e-4686.75hypothetical protein Csa_006059 [Cucumis sativus][more]
KGN61957.12.21e-3880.77hypothetical protein Csa_006779 [Cucumis sativus][more]
OMO57769.13.51e-0851.02ATP-binding/protein serine/threonine kinase [Corchorus olitorius][more]
EOY32073.11.92e-0760.61Uncharacterized protein TCM_039538 [Theobroma cacao][more]
EOY32074.11.92e-0760.61Uncharacterized protein TCM_039540 [Theobroma cacao][more]
BLAST of MELO3C034606.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJR01.89e-4889.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG31.07e-3880.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
A0A1R3GI951.70e-0851.02ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C... [more]
A0A061GY759.27e-0860.61Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039540 PE=4 SV=1[more]
A0A061GRN99.27e-0860.61Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_039538 PE=4 SV=1[more]
BLAST of MELO3C034606.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034606.jh1.t1MELO3C034606.jh1.t1mRNA