Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTAGTGTGTCGGCAAAGTACGAGAATGGACCGAAGAGTTTCGCCATTTTGTGCCACCTACTTAGGACCATTGTTGAACTAACATCGATGAAAGTCGTTGATGTTAAGGAGATGGTCGCAATGTTCCTCCACATACTCGCACACGACGTGAAAAACGGTGTCATTCAATAGGAGTTCATGCAGAGGGTGAGACAATTTCCCACCATTTCAACATGGTGTTGTTGGCAGCAATTTGACTGCATGACGATCTATTGAAAAAACCACAACCAGTATCGAGCGATTACACAAATCAAAGATGGTTTGAGGTTTGTCTTTTTCTCAAACTACGTACTTCCAACCATTCGACTTAAGATCTTGTCATTAATCATCAGTTATGCATTGCAGAATTGTCTTGGTGCATTATATGGCACGTATATCAAAGTCAACATTCCAGAACGTGAGCAGCCTAGGTATAGAACACGCAAGGGGGATGTGGCCACAAATGTCCTTAGCATGTATGTGACAAGAAATGAGATTTCGTTTACGTACTTGCCGATTAGGAAGGATCAGCTACGGACTCACTCATCCTTCAAGATGCCATTTTAACACCTAATGGCCTGAAGGTGCCCAAGGGTAACCACTTACGGCATTGTACGTATAAATACATTTTAGCAATTAACAGCTTCAACATTTTAATTGTGCAATGTGATCACAGGCTATTACTACCTAGTTATGTCGGGTACCCAAATGCATAGGGTTTTCCGAAACCCTACAGAGGCCAATGCTACCACTTCCAAGAATGGCACGGCACTGAAAATGCACTATCAATGTCCAAAGAGTTCTTCAATATGAAGCATTCTTCCGCACGTAATGTAATCGAAAGAGCATTCAGTGTCTTGAAGAGTTGGTGGGAGTCATACTACCATGTAGAAGTCCAATGTCGCATAATACTCCCATGTTGTCTGTTGCACAACCTTAGATGACGAACTTTGATATACCAGACGACATAGATAAGGTTGATTCGACCCACGCGACTATTGTCGGCAATGACATACATTACATAGAGACCTCCAACGAGTGGAATCTGTGGAGGGACGAGCTTGTAGATGAAATGTTTAGTGACTGGGAGTTGCGTAACCAGTAGAACAATTAGTCTGTCATAATTGAATGTTCAGTGTTTCTTTTCATACTTGAGTATTGATTGCATTGGTCTTATTTTGTCATAGTTTTTGGAATATATTTGTTTCGAATGTATTGATTGCGCAAGTAAATGAATGGAAAACTATTTTTCAGTAGGAGTTGAATGTACTATGTATTTGTATTGTAATCGTAGGAAAATTAACAACACTAATATGTTTGCATTTGATTTATAGCATGGCAACTACATTAAGACTACTTAAGCACAGTTGGATGAAAGAGGAAGACGCATACCTCGTCGAGTTAGTAAATGCTGGTGATTGGAGGTCCAACAACGGGACCTTTGGCCCCTGGTACCTAAAATAGCTCGCAAGAATGATGGCCTTCAAGATCCCAGGTTAACATCCTCGCATTAGTGATCGATAGCCGAATAAAATTGTTAAAGAGAACGTACCATGCGCTAGTCGAGATGCATGGCCCGACTTGCAATGGGTTTGGTTGGAACGATGAACGAAAGTGCATCATCGCAGAGAAAGAAGTGTTGATGATTGGGTCAATGTGTGTTATTAGTAATTTTAACCATTACTGTAGTATATTTACAAAAAGTACTAGCCATTTATTATTGCACTTAAATAGAGTCATCCAGCTACGAGGGACCTCCTTAACAGATCGTTTCCCCACTATGACGAACTGTCATACATCTTTGGCAAAGATCGTGCAACGAGAGCCCGGGTCGAGAGTTTTACAAACGTCGAGTCTAATGATCCTGTTAGGTACGAGACATTTGCTGCTGACGCTACGCCGGATATGGAGTTCCAGCCTATGCATAGTCAGGGGTTGGACATGTCGTCTGACGAATTAATGGGAATAAGAACCACTCAGGTAAGTGAGGGTAGGCATGTTTTGAGCGGGTTTAAGCAAAAACGTGGAGTACAACCCGCAGATAGCGGGGATGTAATTCGCACTACGATTGAGTACAAAAATGAACAGCTTAACCACATTGTTGACTGGATTGTCCTACAACGTCAAGATGCAAGCCAAACACGGCAAGAGGTTGTCCAACAGTTGGAAACGATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTGATGCGTAACGTGGACAACATGAAAGCTTTTCTTGACGTTCCCGACAAAATGAAGTTCCCGTACTATAACATAATTCTTCAAGAAAACTCATGA
mRNA sequence
ACCTAGTGTGTCGGCAAAGTACGAGAATGGACCGAAGAGTTTCGCCATTTTGTGCCACCTACTTAGGACCATTGTTGAACTAACATCGATGAAAGTCGTTGATGTTAAGGAGATGGTCGCAATCATGGCAACTACATTAAGACTACTTAAGCACAGTTGGATGAAAGAGGAAGACGCATACCTCGTCGAGTTAAGTCATCCAGCTACGAGGGACCTCCTTAACAGATCGTTTCCCCACTATGACGAACTGTCATACATCTTTGGCAAAGATCGTGCAACGAGAGCCCGGGTCGAGAGTTTTACAAACGTCGAGTCTAATGATCCTGTTAGGTACGAGACATTTGCTGCTGACGCTACGCCGGATATGGAGTTCCAGCCTATGCATAGTCAGGGGTTGGACATGTCGTCTGACGAATTAATGGGAATAAGAACCACTCAGGTAAGTGAGGGTAGGCATGTTTTGAGCGGGTTTAAGCAAAAACGTGGAGTACAACCCGCAGATAGCGGGGATGTAATTCGCACTACGATTGAGTACAAAAATGAACAGCTTAACCACATTGTTGACTGGATTGTCCTACAACGTCAAGATGCAAGCCAAACACGGCAAGAGGTTGTCCAACAGTTGGAAACGATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTGATGCGTAACGTGGACAACATGAAAGCTTTTCTTGACGTTCCCGACAAAATGAAGTTCCCGTACTATAACATAATTCTTCAAGAAAACTCATGA
Coding sequence (CDS)
ATGAAAGTCGTTGATGTTAAGGAGATGGTCGCAATCATGGCAACTACATTAAGACTACTTAAGCACAGTTGGATGAAAGAGGAAGACGCATACCTCGTCGAGTTAAGTCATCCAGCTACGAGGGACCTCCTTAACAGATCGTTTCCCCACTATGACGAACTGTCATACATCTTTGGCAAAGATCGTGCAACGAGAGCCCGGGTCGAGAGTTTTACAAACGTCGAGTCTAATGATCCTGTTAGGTACGAGACATTTGCTGCTGACGCTACGCCGGATATGGAGTTCCAGCCTATGCATAGTCAGGGGTTGGACATGTCGTCTGACGAATTAATGGGAATAAGAACCACTCAGGTAAGTGAGGGTAGGCATGTTTTGAGCGGGTTTAAGCAAAAACGTGGAGTACAACCCGCAGATAGCGGGGATGTAATTCGCACTACGATTGAGTACAAAAATGAACAGCTTAACCACATTGTTGACTGGATTGTCCTACAACGTCAAGATGCAAGCCAAACACGGCAAGAGGTTGTCCAACAGTTGGAAACGATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTGATGCGTAACGTGGACAACATGAAAGCTTTTCTTGACGTTCCCGACAAAATGAAGTTCCCGTACTATAACATAATTCTTCAAGAAAACTCATGA
Protein sequence
MKVVDVKEMVAIMATTLRLLKHSWMKEEDAYLVELSHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMKFPYYNIILQENS
Homology
BLAST of MELO3C034548 vs. NCBI nr
Match:
KAA0065390.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK28872.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 215/268 (80.22%), Postives = 215/268 (80.22%), Query Frame = 0
Query: 13 MATTLRLLKHSWMKEEDAYLVEL------------------------------------- 72
MATTLRLLKHSWMKEEDAYLVEL
Sbjct: 1 MATTLRLLKHSWMKEEDAYLVELVNAGDWRSNNGTFGPCRIKLLKRTYHALVEMHGPTCN 60
Query: 73 ----------------SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP 132
SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP
Sbjct: 61 GFGWNDERKCIIAEKESHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP 120
Query: 133 VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS 192
VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS
Sbjct: 121 VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS 180
Query: 193 GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR 228
GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR
Sbjct: 181 GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR 240
BLAST of MELO3C034548 vs. NCBI nr
Match:
KAA0063726.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 275.8 bits (704), Expect = 3.4e-70
Identity = 136/191 (71.20%), Postives = 156/191 (81.68%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
SHPA + LLN+SF HYDELSY+FGKDRAT RVESF NV SNDP Y+ FA DA PD +F
Sbjct: 84 SHPAAKGLLNKSFFHYDELSYVFGKDRATGDRVESFANVRSNDPAEYDAFATDAVPDTDF 143
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
PM+SQGL+MS D+LMG RT +VSE R+V SG K+KR DSGD++RT IEY+NEQLN
Sbjct: 144 PPMYSQGLNMSPDDLMGTRTARVSERRNVSSGSKRKRAGHATDSGDIVRTAIEYRNEQLN 203
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I +W VLQRQ+ASQTRQEVV+QLE IPEL LMDRCRL+ ILM NVD+MKAFLDVPD MK
Sbjct: 204 RIAEWPVLQRQNASQTRQEVVRQLEAIPELILMDRCRLMHILMCNVDDMKAFLDVPDNMK 263
Query: 216 FPYYNIILQEN 227
+ YYNIILQEN
Sbjct: 264 YSYYNIILQEN 274
BLAST of MELO3C034548 vs. NCBI nr
Match:
TYK10954.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 271.2 bits (692), Expect = 8.3e-69
Identity = 134/191 (70.16%), Postives = 155/191 (81.15%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
SHPA + LLN+SF HYDELSY+FGK RAT RVESF NV SNDP Y+ FA DA PD +F
Sbjct: 84 SHPAAKGLLNKSFLHYDELSYVFGKYRATGDRVESFANVRSNDPAEYDAFATDAVPDTDF 143
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
PM+SQGL+MS D+LMG RT +VSE R+V SG K+KR DSGD++RT IEY+NEQLN
Sbjct: 144 PPMYSQGLNMSPDDLMGTRTARVSERRNVSSGSKRKRAGHATDSGDIVRTAIEYRNEQLN 203
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I +W VLQRQ+ASQTRQEVV++LE IPEL LMDRCRL+ ILM NVD+MKAFLDVPD MK
Sbjct: 204 RIAEWPVLQRQNASQTRQEVVRKLEAIPELILMDRCRLMHILMCNVDDMKAFLDVPDNMK 263
Query: 216 FPYYNIILQEN 227
+ YYNIILQEN
Sbjct: 264 YSYYNIILQEN 274
BLAST of MELO3C034548 vs. NCBI nr
Match:
KAA0068123.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68
Identity = 143/258 (55.43%), Postives = 174/258 (67.44%), Query Frame = 0
Query: 13 MATTLRLLKHSWMKEEDAYLVEL------------------------------------- 72
M ++ RLLKH+W KEE+A LVEL
Sbjct: 1 MTSSSRLLKHTWTKEEEAGLVELVNAGGWRSDHGTFHPGCVTQTVMVLGGMMKKKCIIAE 60
Query: 73 -------SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAAD 132
SHPA + LLN+SF HYDELSY+FGKDRAT R ESF ++ SNDP Y+ FAAD
Sbjct: 61 KEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAAD 120
Query: 133 ATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIE 192
A D +F P++S GL+MS D+LM IRT +VSE R+V SG K KR DSGD++RT IE
Sbjct: 121 AVSDTDFPPIYSSGLNMSRDDLMEIRTARVSERRNVSSGSKWKRPGHATDSGDIVRTAIE 180
Query: 193 YKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFL 227
Y NEQL+ I +W +LQRQDA+QTRQE+V+QLE IPELTLMDRCRL+RI+MRNVD+MKAFL
Sbjct: 181 YGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFL 240
BLAST of MELO3C034548 vs. NCBI nr
Match:
KAA0067287.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK10900.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 269.2 bits (687), Expect = 3.1e-68
Identity = 134/191 (70.16%), Postives = 160/191 (83.77%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
S+ A +DLLN+SFPHYDELSY+FGKDRATR + E+F +V NDP +YE F ADA D +F
Sbjct: 124 SNSAAKDLLNKSFPHYDELSYVFGKDRATRGQAETFMDVRLNDPAKYEAFVADAALDTDF 183
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
QPM++QGL+MS DELMG RTT+VSEGR V + ++KRG Q A+S +VIRT IEY+NEQLN
Sbjct: 184 QPMYNQGLNMSPDELMGTRTTRVSEGRFVSNRSERKRGPQAANSEEVIRTAIEYENEQLN 243
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I + VLQRQDASQTRQEVV+QLE IPELTLMDRCR++RILMRNVD+MKAFLD+PD MK
Sbjct: 244 RIAESPVLQRQDASQTRQEVVRQLEVIPELTLMDRCRVMRILMRNVDDMKAFLDIPDNMK 303
Query: 216 FPYYNIILQEN 227
+ Y NIILQEN
Sbjct: 304 YSYCNIILQEN 314
BLAST of MELO3C034548 vs. ExPASy TrEMBL
Match:
A0A5A7VDW8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00140 PE=4 SV=1)
HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 215/268 (80.22%), Postives = 215/268 (80.22%), Query Frame = 0
Query: 13 MATTLRLLKHSWMKEEDAYLVEL------------------------------------- 72
MATTLRLLKHSWMKEEDAYLVEL
Sbjct: 1 MATTLRLLKHSWMKEEDAYLVELVNAGDWRSNNGTFGPCRIKLLKRTYHALVEMHGPTCN 60
Query: 73 ----------------SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP 132
SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP
Sbjct: 61 GFGWNDERKCIIAEKESHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDP 120
Query: 133 VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS 192
VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS
Sbjct: 121 VRYETFAADATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADS 180
Query: 193 GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR 228
GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR
Sbjct: 181 GDVIRTTIEYKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMR 240
BLAST of MELO3C034548 vs. ExPASy TrEMBL
Match:
A0A5A7VBC5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00070 PE=4 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.6e-70
Identity = 136/191 (71.20%), Postives = 156/191 (81.68%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
SHPA + LLN+SF HYDELSY+FGKDRAT RVESF NV SNDP Y+ FA DA PD +F
Sbjct: 84 SHPAAKGLLNKSFFHYDELSYVFGKDRATGDRVESFANVRSNDPAEYDAFATDAVPDTDF 143
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
PM+SQGL+MS D+LMG RT +VSE R+V SG K+KR DSGD++RT IEY+NEQLN
Sbjct: 144 PPMYSQGLNMSPDDLMGTRTARVSERRNVSSGSKRKRAGHATDSGDIVRTAIEYRNEQLN 203
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I +W VLQRQ+ASQTRQEVV+QLE IPEL LMDRCRL+ ILM NVD+MKAFLDVPD MK
Sbjct: 204 RIAEWPVLQRQNASQTRQEVVRQLEAIPELILMDRCRLMHILMCNVDDMKAFLDVPDNMK 263
Query: 216 FPYYNIILQEN 227
+ YYNIILQEN
Sbjct: 264 YSYYNIILQEN 274
BLAST of MELO3C034548 vs. ExPASy TrEMBL
Match:
A0A5D3CIF5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00370 PE=4 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 4.0e-69
Identity = 134/191 (70.16%), Postives = 155/191 (81.15%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
SHPA + LLN+SF HYDELSY+FGK RAT RVESF NV SNDP Y+ FA DA PD +F
Sbjct: 84 SHPAAKGLLNKSFLHYDELSYVFGKYRATGDRVESFANVRSNDPAEYDAFATDAVPDTDF 143
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
PM+SQGL+MS D+LMG RT +VSE R+V SG K+KR DSGD++RT IEY+NEQLN
Sbjct: 144 PPMYSQGLNMSPDDLMGTRTARVSERRNVSSGSKRKRAGHATDSGDIVRTAIEYRNEQLN 203
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I +W VLQRQ+ASQTRQEVV++LE IPEL LMDRCRL+ ILM NVD+MKAFLDVPD MK
Sbjct: 204 RIAEWPVLQRQNASQTRQEVVRKLEAIPELILMDRCRLMHILMCNVDDMKAFLDVPDNMK 263
Query: 216 FPYYNIILQEN 227
+ YYNIILQEN
Sbjct: 264 YSYYNIILQEN 274
BLAST of MELO3C034548 vs. ExPASy TrEMBL
Match:
A0A5A7VJ40 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00840 PE=4 SV=1)
HSP 1 Score: 270.8 bits (691), Expect = 5.2e-69
Identity = 143/258 (55.43%), Postives = 174/258 (67.44%), Query Frame = 0
Query: 13 MATTLRLLKHSWMKEEDAYLVEL------------------------------------- 72
M ++ RLLKH+W KEE+A LVEL
Sbjct: 1 MTSSSRLLKHTWTKEEEAGLVELVNAGGWRSDHGTFHPGCVTQTVMVLGGMMKKKCIIAE 60
Query: 73 -------SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAAD 132
SHPA + LLN+SF HYDELSY+FGKDRAT R ESF ++ SNDP Y+ FAAD
Sbjct: 61 KEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAAD 120
Query: 133 ATPDMEFQPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIE 192
A D +F P++S GL+MS D+LM IRT +VSE R+V SG K KR DSGD++RT IE
Sbjct: 121 AVSDTDFPPIYSSGLNMSRDDLMEIRTARVSERRNVSSGSKWKRPGHATDSGDIVRTAIE 180
Query: 193 YKNEQLNHIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFL 227
Y NEQL+ I +W +LQRQDA+QTRQE+V+QLE IPELTLMDRCRL+RI+MRNVD+MKAFL
Sbjct: 181 YGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFL 240
BLAST of MELO3C034548 vs. ExPASy TrEMBL
Match:
A0A5A7VJD7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00750 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.5e-68
Identity = 134/191 (70.16%), Postives = 160/191 (83.77%), Query Frame = 0
Query: 36 SHPATRDLLNRSFPHYDELSYIFGKDRATRARVESFTNVESNDPVRYETFAADATPDMEF 95
S+ A +DLLN+SFPHYDELSY+FGKDRATR + E+F +V NDP +YE F ADA D +F
Sbjct: 124 SNSAAKDLLNKSFPHYDELSYVFGKDRATRGQAETFMDVRLNDPAKYEAFVADAALDTDF 183
Query: 96 QPMHSQGLDMSSDELMGIRTTQVSEGRHVLSGFKQKRGVQPADSGDVIRTTIEYKNEQLN 155
QPM++QGL+MS DELMG RTT+VSEGR V + ++KRG Q A+S +VIRT IEY+NEQLN
Sbjct: 184 QPMYNQGLNMSPDELMGTRTTRVSEGRFVSNRSERKRGPQAANSEEVIRTAIEYENEQLN 243
Query: 156 HIVDWIVLQRQDASQTRQEVVQQLETIPELTLMDRCRLIRILMRNVDNMKAFLDVPDKMK 215
I + VLQRQDASQTRQEVV+QLE IPELTLMDRCR++RILMRNVD+MKAFLD+PD MK
Sbjct: 244 RIAESPVLQRQDASQTRQEVVRQLEVIPELTLMDRCRVMRILMRNVDDMKAFLDIPDNMK 303
Query: 216 FPYYNIILQEN 227
+ Y NIILQEN
Sbjct: 304 YSYCNIILQEN 314
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0065390.1 | 2.8e-109 | 80.22 | retrotransposon protein [Cucumis melo var. makuwa] >TYK28872.1 retrotransposon p... | [more] |
| KAA0063726.1 | 3.4e-70 | 71.20 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| TYK10954.1 | 8.3e-69 | 70.16 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| KAA0068123.1 | 1.1e-68 | 55.43 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| KAA0067287.1 | 3.1e-68 | 70.16 | retrotransposon protein [Cucumis melo var. makuwa] >TYK10900.1 retrotransposon p... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VDW8 | 1.4e-109 | 80.22 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7VBC5 | 1.6e-70 | 71.20 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CIF5 | 4.0e-69 | 70.16 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7VJ40 | 5.2e-69 | 55.43 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7VJD7 | 1.5e-68 | 70.16 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
