MELO3C034510 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034510
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	centromere/kinetochore protein zw10 homolog
Location	chr10: 22142699 .. 22144486 (-)
RNA-Seq Expression	MELO3C034510
Synteny	MELO3C034510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGTTTGAAAACCGAACTCGAGGGAGAAACTAAGGCGAGCCTCAACCTTTTCTAGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGGTCAGTCTAATCCTTCTTTTTGTGTTTAATTAATCTCTTTTCTGAATCGAAGAAAGGTGTTTCCATTATAGATCTGGTCTTTGTTTTGTTTATGTTGGTTGCTCTTTAATGTGCTCTAAACATGGTTTCTTTGTGACGATTTAAAGCTTGACCATCCTTTTTGATTCTGTATTGTTTACCTAGTTATCAGATGCTTGGGATAAAAATGCTTATGTTGCTTCTACTTGGTTGTTTTGAGAGATAGGCATTCATTTTTATGTCTTTGAGAAATGATTATGTGATTGACTCGTATTGTCAATGTAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGTAAGTTCTTAGGACATGATAATATTCCTTTATAATTATTATATTACCGTTGTTTTGTGTAATGAATATGAATACAGGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAAGTAAAGCCCTTCAAATCAAGTTGTTGACTTACTTTTCCCTTGGATTGCAAGTCTCCTTCTGCTTATTTTAAGCCTGAACAATCTTCAAGAAGCGTCATTTCGCAGAAATGGGCAGTTTTTCTTTTCCTCGGCAGCTTCTGTTTGGAGATGTTCTTCACAAACAGGTTCGTATCAGTAAGAAAAATTTGATGGGGGTGTGTTCAATTAGCTTTGATCGATGGGTTGAAATGGTTTCTCTTGGATTCCTAGGTTTTAGGTTCCAATTTGGGTGTTCTCTTTTTGGGTTTTGTATTTATTTGGGGAAACATTGCCCATTTTTCATTTATTAAATGCAGCCGACAGTATTAATGTTCTTGGTTTTGTGTATTTTTGTTTGTTGATTAAAGTTGTATATTTTGAAAAATTGATCACCAGCAGTTATAGCCCTATTAATACGATTTTTTTTTTCTATTTCGTTCCACCATCTAGTTGTTTTCGTTTTCCTCCTCATTCTGATTGGGTGAAGAACTGTTTCTTTTCACCATTTCCTCATTGAATAAAGATTTAGACAAAACCTTGGGTTGTTTATGGATTTATGGATTTGATTTCGTTGTTATCATGAGTATTCTTATAACATCCACCGTCAATTATGGGAAAAAGGACGTCTGTTTCGAGAAGCTTAAGAATCAGCTCTGTCGGGAAGATTGTTCCAATGTTTTTTTTCCTTAAAAAGAAGAGATAAACTGAAGATCATATTCAAATTGCTTGTAGGATGTGGAATGTTCCAGAACCTAAAGGAATCACTCGAACAACGCCATTTGAAGCCGAAAAGTTAAAGTTAGTTTCGTAAGGCTGTGGTCCGAAATCGATAAGCATCTTCAAAGCTGTTTTCGTTACTTGTCGAAAAGGATACATGTTCAAGAAAGTAATTACATTGCTACTTTTATATTTTCTAGTTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

mRNA sequence

ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAATTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

Coding sequence (CDS)

ATGACGTCACCGCTCTGTGCTGTACGCCACACCACTAGACGCCGCACCGTTGGACGCCGCACTGCTGGACACCGCACCGCTGGATGTCGCCTTCTACTTCGCACCCGACCCACTTTTCTTCTACCGCATCTGTCACAGCCACCATTGGGTTCACTGCCACTCAGCTCCACCATGCATAGAATCGCCGATTCACGACTCAAGTCGCTCAAGTTGTACTTTGCATCTGGGAAGAGGAAAGAAATTTTAGCAAAGGCCAGAAATTTGCTTCTTAAATGCGATTTCTTTGTCCCTAAAGAGCTCACAATCAAAGGTGATAAGCAAAACTGGAATGAAATGGTTAAATTGGATGAGAAGGAAGCAAAGCGCGTGTCGAAAGATATTTTCGGGGAAGTCTCTAAGACTCACAATGCTATACAGTGA

Protein sequence

MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLGSLPLSSTMHRIADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKLDEKEAKRVSKDIFGEVSKTHNAIQ

Homology

[Close]

BLAST of MELO3C034510 vs. NCBI nr
Match: TYK14975.1 (putative beta-1,3-galactosyltransferase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 7.6e-41
Identity = 94/125 (75.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 1   MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLGSLPLSSTMHR 60
           MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPL           
Sbjct: 1   MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPL----------- 60

Query: 61  IADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKLDEKEA 120
                     LYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK ++   
Sbjct: 61  ----------LYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKPEQSSR 104

Query: 121 KRVSK 126
             +S+
Sbjct: 121 SVISQ 104

[Close]

BLAST of MELO3C034510 vs. NCBI nr
Match: KAA0066383.1 (uncharacterized protein E6C27_scaffold21G004570 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-21
Identity = 84/164 (51.22%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 2   TSPLC-AVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLG-----SLPLS 61
           TS  C +  H  RRR+V   T          LL T P     + +  PL       +  S
Sbjct: 15  TSNACRSSAHVVRRRSVLYATPLDVAPLDTALLDTAPLDTAFYAAPDPLSFYCPRLMFTS 74

Query: 62  STMHRIADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKG----DKQNWNE 121
           STMHRI  SRLKSLKLYFASGKRKE LAKARNLLLKCDF V KELTIK      K+++ E
Sbjct: 75  STMHRIIGSRLKSLKLYFASGKRKEFLAKARNLLLKCDFSVLKELTIKAWTIFKKRHFVE 134

Query: 122 M----------------VKLDEKEAKRVSKDIFGEVSKTHNAIQ 140
           M                 +LDEKE KRVSKDIF EVSKTHNA+Q
Sbjct: 135 MGRFSLPWQLLFGDVLHKQLDEKEVKRVSKDIFREVSKTHNALQ 178

[Close]

BLAST of MELO3C034510 vs. NCBI nr
Match: TYK00901.1 (putative beta-1,3-galactosyltransferase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 6.7e-21
Identity = 81/155 (52.26%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 10  HTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLG-----SLPLSSTMHRIADS 69
           H  RRR+V   T          LL T P     + +  PL       +  SSTMHRI  S
Sbjct: 24  HVVRRRSVLYATPLDVAPLDTALLDTAPLDTAFYAAPDPLSFYCPRLMFTSSTMHRIIGS 83

Query: 70  RLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKG----DKQNWNEM-------- 129
           RLKSLKLYFASGKRKE LAKARNLLLKCDF V KELTIK      K+++ EM        
Sbjct: 84  RLKSLKLYFASGKRKEFLAKARNLLLKCDFSVLKELTIKAWTIFKKRHFVEMGRFSLPWQ 143

Query: 130 --------VKLDEKEAKRVSKDIFGEVSKTHNAIQ 140
                    +LDEKE KRVSKDIF EVSKTHNA+Q
Sbjct: 144 LLFGDVLHKQLDEKEVKRVSKDIFREVSKTHNALQ 178

[Close]

BLAST of MELO3C034510 vs. NCBI nr
Match: KAA0054497.1 (centromere/kinetochore protein zw10-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 8.0e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 461 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 508

[Close]

BLAST of MELO3C034510 vs. NCBI nr
Match: XP_008456395.1 (PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 8.0e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 437

[Close]

BLAST of MELO3C034510 vs. ExPASy Swiss-Prot
Match: O48626 (Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana OX=3702 GN=ZW10 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-04
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 62  ADSRL----KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDK 107
           A+SRL    + ++++FAS K+ EILAKARNLLL+C+F +P+++ ++  K
Sbjct: 381 AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQDIAMRNAK 429

[Close]

BLAST of MELO3C034510 vs. ExPASy TrEMBL
Match: A0A5D3CTX2 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00060 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.7e-41
Identity = 94/125 (75.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 1   MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLGSLPLSSTMHR 60
           MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPL           
Sbjct: 1   MTSPLCAVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPL----------- 60

Query: 61  IADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKLDEKEA 120
                     LYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK ++   
Sbjct: 61  ----------LYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVKPEQSSR 104

Query: 121 KRVSK 126
             +S+
Sbjct: 121 SVISQ 104

[Close]

BLAST of MELO3C034510 vs. ExPASy TrEMBL
Match: A0A5A7VE31 (DUF4094 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004570 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-21
Identity = 84/164 (51.22%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 2   TSPLC-AVRHTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLG-----SLPLS 61
           TS  C +  H  RRR+V   T          LL T P     + +  PL       +  S
Sbjct: 15  TSNACRSSAHVVRRRSVLYATPLDVAPLDTALLDTAPLDTAFYAAPDPLSFYCPRLMFTS 74

Query: 62  STMHRIADSRLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKG----DKQNWNE 121
           STMHRI  SRLKSLKLYFASGKRKE LAKARNLLLKCDF V KELTIK      K+++ E
Sbjct: 75  STMHRIIGSRLKSLKLYFASGKRKEFLAKARNLLLKCDFSVLKELTIKAWTIFKKRHFVE 134

Query: 122 M----------------VKLDEKEAKRVSKDIFGEVSKTHNAIQ 140
           M                 +LDEKE KRVSKDIF EVSKTHNA+Q
Sbjct: 135 MGRFSLPWQLLFGDVLHKQLDEKEVKRVSKDIFREVSKTHNALQ 178

[Close]

BLAST of MELO3C034510 vs. ExPASy TrEMBL
Match: A0A5D3BM54 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00630 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.3e-21
Identity = 81/155 (52.26%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 10  HTTRRRTVGRRTAGHRTAGCRLLLRTRPTFLLPHLSQPPLG-----SLPLSSTMHRIADS 69
           H  RRR+V   T          LL T P     + +  PL       +  SSTMHRI  S
Sbjct: 24  HVVRRRSVLYATPLDVAPLDTALLDTAPLDTAFYAAPDPLSFYCPRLMFTSSTMHRIIGS 83

Query: 70  RLKSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKG----DKQNWNEM-------- 129
           RLKSLKLYFASGKRKE LAKARNLLLKCDF V KELTIK      K+++ EM        
Sbjct: 84  RLKSLKLYFASGKRKEFLAKARNLLLKCDFSVLKELTIKAWTIFKKRHFVEMGRFSLPWQ 143

Query: 130 --------VKLDEKEAKRVSKDIFGEVSKTHNAIQ 140
                    +LDEKE KRVSKDIF EVSKTHNA+Q
Sbjct: 144 LLFGDVLHKQLDEKEVKRVSKDIFREVSKTHNALQ 178

[Close]

BLAST of MELO3C034510 vs. ExPASy TrEMBL
Match: A0A5A7UIV3 (Centromere/kinetochore protein zw10-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002760 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.9e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 461 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 508

[Close]

BLAST of MELO3C034510 vs. ExPASy TrEMBL
Match: A0A1S3C346 (centromere/kinetochore protein zw10 homolog OS=Cucumis melo OX=3656 GN=LOC103496345 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.9e-14
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 67  KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDKQNWNEMVK 115
           ++++++FASGKRKEILAKARNLLLKCDF VPKELTIKGDKQNWNEMVK
Sbjct: 390 ENVEVHFASGKRKEILAKARNLLLKCDFSVPKELTIKGDKQNWNEMVK 437

[Close]

BLAST of MELO3C034510 vs. TAIR 10
Match: AT2G32900.1 (centromere/kinetochore protein, putative (ZW10) )

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 62  ADSRL----KSLKLYFASGKRKEILAKARNLLLKCDFFVPKELTIKGDK 107
           A+SRL    + ++++FAS K+ EILAKARNLLL+C+F +P+++ ++  K
Sbjct: 381 AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQDIAMRNAK 429

The following BLAST results are available for this feature:

BLAST of MELO3C034510 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14975.1	7.6e-41	75.20	putative beta-1,3-galactosyltransferase 2 [Cucumis melo var. makuwa]	[more]
KAA0066383.1	5.1e-21	51.22	uncharacterized protein E6C27_scaffold21G004570 [Cucumis melo var. makuwa]	[more]
TYK00901.1	6.7e-21	52.26	putative beta-1,3-galactosyltransferase 2 [Cucumis melo var. makuwa]	[more]
KAA0054497.1	8.0e-14	85.42	centromere/kinetochore protein zw10-like protein [Cucumis melo var. makuwa]	[more]
XP_008456395.1	8.0e-14	85.42	PREDICTED: centromere/kinetochore protein zw10 homolog [Cucumis melo]	[more]

BLAST of MELO3C034510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48626	2.7e-04	46.94	Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana OX=3702 GN=Z...	[more]

BLAST of MELO3C034510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTX2	3.7e-41	75.20	Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00...	[more]
A0A5A7VE31	2.5e-21	51.22	DUF4094 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BM54	3.3e-21	52.26	Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G0...	[more]
A0A5A7UIV3	3.9e-14	85.42	Centromere/kinetochore protein zw10-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3C346	3.9e-14	85.42	centromere/kinetochore protein zw10 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]

BLAST of MELO3C034510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32900.1	1.9e-05	46.94	centromere/kinetochore protein, putative (ZW10)	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034510.1	MELO3C034510.1	mRNA