MELO3C034426.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034426.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 16286670 .. 16290542 (-)
RNA-Seq ExpressionMELO3C034426.jh1
SyntenyMELO3C034426.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGATTTATGCTATAATGACGATTTGAGTGGTGGAGGAGACTTTTGTGATGGAGGAGGATTATTAATTTCTTTGCCAGGAAGATATGGATTGTCCATAGGCAGCGAGAAAGAAGGTACCGTGTCATTTTGGAGTTTTCATTATGCAAGAGAGTCATCTTCAAGGACCCTTTTGTTTGTCAGCTTTCTTCACTTCTTTTGCGGAGGGTCCTTCGCAGGCTGGTCATATTTGGTTGCTTCAACCCCTATCCTTGAGGTTGATCCTTTTCCTTTTAGCAGCAATGGGGGTGAAGTGTCATCTTTATCATCAATTTCCACTCTTTTATGTTTTTGTGTCTTCTAGTACCGTTCTTCCTCCTAATTTTGATGGAGGGTTCTTATGCAATTGAGTCACACCAGGTTGCACCTTCCTCCCACCATGTCAATCTGTGGGTATCTCACGGGGGTGGGCAAGTACTTTAGACACAACCTCTCCACTATTATTGGGAACGATTTTACGCCTTTTGGGTTCCTTATCCAGCTAAGGAATGCCTTATTCATCACATAGCCCAAGTTGAATGGCTGCATCGCCATTATGCAGTAAAGGAGTAGCACGTACTCAATTGGGATTGTACTATCATGGCATGTTGGGATGATCTTCTACTTAATACAGAAAAGCCACACATTGACTTCGGTTGTTAACTGATGCAAGTAGAGTTGAAGTCTCCCAATTGGCGTTCTTGTCCAATCCCCTCTGGCCATGCGATTAACTGGATTATTCTTCTCGCGTCTCCTTTAGTAGGATTAGCAACGAGCCTTTAGCCATGGTAAGCATCTGGGTCATTTGGAAGGTTATATGATTCGTTAATCTCCTCCGTGGTGAAAGGCAACTTCTCCCCTTCCACTATTGCATATGACTCGTCCGGATGATATTTCATCGCGTAAAACATATTAACAATATCCAACCTCACCTTGGTTTTTCCCATGAAAAATTTCTTCCATTTAAGTGCCTTAATTTTGATCAACTTATCAAGCTCCTGAGCACTCAATTTACTCCCTTTTTTCATATCCTTAGGCCTGGATGTCCCTACCTTGTTCTTTCCTTTCTTTGGTTGCGTGGCAATTACGAGTTCTTATTCTTCAGGCCTTAGCCTTGACTCTAATGGACTCATCCTCTCTATTTCTTGACTAAATTCTCCCACTACAACCTCCAGAAGATCAACCTCTCTATTTCTTGACTAAATGCTTAGTTCCACGAGTGTTTCTTGTTTCTTGGCTGTTTGGATTTCTGCAAATTTGGTTTTAGTCTCTTCCAAGAATTCAACATTCTTCTTTTTCTCCTTAAACACTTGATGGAGTCGGTCATCCTCCTTGCGACCTTTTTCTTTTCTTTTTTTTCCTCCTCCTCTCTATTTCTCTTATCTTCCATCATGCGTGATTTGTGTTTGCGCTCTCTCTTTTGCCTCTCCTCATCTTCTCTGAATTTCTCCTCTTCTCGCTTAGCCCATTTTTCTTACAGGGTTGTTTCCTCTTCCTTCTTTCTTCTTCTTTTCTTCTTTCCTCTTTAGCCTTCTTCTTCCCTACCGCTTCAACCTTCATCTTCTCTTCCGCTTCATGTTCTTTGACAAATTTCATGATTTTATCCAAAAATTTTGATGGCACTTCTATTCCTTCCTCTCACTACGCTCTCTGCTTCCCACAAGAACCCTGCTAGCCCCATGCTTCAAGTGCTTTTTTAGGCTTATCGTCATCAAGCCTCATTGTTCCCATTCCAGGTTCCAAATCAGTCAATCCATGAAATTGTTGGAAAAAGAACTAGGGCTAGATGCAACAGGATTAACATAAAAAAAATCTCTAACCCTTAGAACATAAACAAACCTGCATAAACAATTAAATCTCGAATAAACATACCTCTATGCTAATTTTCCAAATTTGAATTGACTTGTTTGATAAGGTTGATCCTCCAAATTCTTATCACCAAAACACTGCAAAATCACAAGCGTTCTCTGACTGTGTCCACATATGAACTGGGAATTTGACTCCTCGAATTCGGGTCTGCTAGAATCTTACAAAGTTAGAATTTCGACTCTCTCTATTCTCTCTTTGTGTAGAAAGAATTTTATGTCTTTGCTTGTATGTAATATAAGACCCATAAGGTCTTATTTATAAGCTTCCTTGGGTTTCCAAATAAGCTTAGGATTCCTAATAAGCTTCTAATTCTCCAATTAGGCTTATTAGTTACGTCTCCTAATAAGTTTCCAATGCTCCAATTGGACTTATTAATTATGTTTCCTAATATGATTTCAATTCTCCAATTGGATGTATTTATTATCCAGCTTGAAGAAAAATTTGACCTAGTTCTTTCGTGTGTGACCCTTTAGGTTAATTTAAGTGGCGACAAGAAAAATAGCAAAATCTAACGTTTACTTTGGATAAATGGTAAAAAAAAAAAATTTCAAAATAGCAAAACAGTTAATTTTCACATAATAAATGGGACAACTATGCCTTAAGTGCCCCTACCTAATTTACAATATAGACTCTTAAATACAATAGTAAACAGAATCGCAAATACCCTATACTTAATACACATTGCCTTCAAATTTCTATTTTCCCTCCTAAATAAATAAACCATCTTCAGCAAAACATCACATCTTCTGCATGCAACCACTCCACTTCTCAAATAAAACCCTAGTTTTTCCTTCCCTTTTAATTCTTAAAAGCTTTCCAGGAACTTCCATTTTTTGAAGGCTTCCCAGTGCATTTCCACCCTTGCGTCCTCTTCCGTTTTTCCAGCGTAGCTTTCTCCTTTGTTTGTCTTCCACAGTCGCTTTGTCTTCCACCGTCGCTTTTCCACCACCGCTTTTCCGCCGTCTGCACGTTCTTCGTTTTTCGACCGTAGCTTACTTTTTAGTTTTTCCACAGTCGATTTGTCTTCCACCGTCGCTTTTCCACCGTCATTTTTCCGCTGTCTGCATGCCCTTCGTTTTTTAATCGGTTTGCATCGCCCATTGTGCAAAGTATCGGTGAGTTGTTCCTTCTTCAACCTTTGGATTCTTGCTCTGTTTTCTGCATGTATGTGTTTTCTGCATATTCAACCTTTGGATTCTTGCTCTGTTTAAAAATATCGAGTTTTAATTCTCCGATTCTAATTTTTGTTTAAATTTCACCCGCACCTTTGGATTCTTTAAACTTTCAAATCGCTTTCCACCCGCACCTTACAAATTTTCAAATTGCTTTCAAATGGCATAGAAAGTCATATTTATATTTTAATTCCATAATTTTTGTTTCCTAAAATAAAGGGCATAAAATGTGAACAGATACGCTCTTTATTTTAGGAGTGTTACTTGAGATTTTTTCTGAAGTTATATATAAATATATATTGGCTTTTGAACTTTTTTAAATTTTATAGAATATAAAGATGAAAAGGGGGGAGGGAGAAGTTAAAACAAGAACAAGTGATCGGTTAAGAGACGTGGGGATCACTTCTAGAAAATCATTGGCAACAGGAATTCAAAACCTATCGAGTTCTTCTGAGGAGGTACAAATGCATGTTTTCTGTAATTATAAACAAGTTATAGATGTTTATATGTTTTTCTATAAATGTCAGAGAACAGAAGATATCATGGCAGAAGGCTCCGGGGGCAAAAGAGAGAGTCTAGGAACTTCAAAAAAGAGGGTAAGGACTGAAACGAAAAAAGAGGAGGCCACTGTCCAGAAGAAACAACGGATTAAGAGTTTGGTAAAGTGTAGATCTATTCTCCAATTACTTGTGGTCTGTTAGGTTTCAAATAAGCTTTTATTTATATTGTTCCCTGTTTAGGTTTCGAGGAGGCGAGTTCATAAGGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAAGGTATAA

mRNA sequence

ATGGGAGATTTATGCTATAATGACGATTTGAGTGGTGGAGGAGACTTTTGTGATGGAGGAGGATTATTAATTTCTTTGCCAGGAAGATATGGATTGTCCATAGGCAGCGAGAAAGAAGTACCGTTCTTCCTCCTAATTTTGATGGAGGGTTCTTATGCAATTGAGTCACACCAGGTTGCACCTTCCTCCCACCATGTCAATCTGTGGGTATCTCACGGGGGTGGGCAACCTTCTTCTTCCCTACCGCTTCAACCTTCATCTTCTCTTCCGCTTCATGAACTTCCATTTTTTGAAGGCTTCCCAGTGCATTTCCACCCTTGCGTCCTCTTCCGTTTTTCCAGCGTAGCTTTCTCCTTTGTTTGTCTTCCACAGTCGCTTTGTCTTCCACCGTCGCTTTTCCACCACCGCTTTTCCGCCGTCTGCACGTTCTTCGTTTTTCGACCGTAGCTTACTTTTTAGTTTTTCCACAGTCGATTTGTCTTCCACCGTCGCTTTTCCACCGTCATTTTTCCGCTGTCTGCATGCCCTTCGTTTTTTAATCGGTTTGCATCGCCCATTGTGCAAAGTATCGAATATAAAGATGAAAAGGGGGGAGGGAGAAGTTAAAACAAGAACAAGTGATCGGTTAAGAGACGTGGGGATCACTTCTAGAAAATCATTGGCAACAGGAATTCAAAACCTATCGAGTTCTTCTGAGGAGAGAACAGAAGATATCATGGCAGAAGGCTCCGGGGGCAAAAGAGAGAGTCTAGGAACTTCAAAAAAGAGGGTAAGGACTGAAACGAAAAAAGAGGAGGCCACTGTCCAGAAGAAACAACGGATTAAGAGTTTGGTTTCGAGGAGGCGAGTTCATAAGGGGAAAGGTGAAGGAAAAAAACAAAAAGAGGTTGAAGGAAAGGTATAA

Coding sequence (CDS)

ATGGGAGATTTATGCTATAATGACGATTTGAGTGGTGGAGGAGACTTTTGTGATGGAGGAGGATTATTAATTTCTTTGCCAGGAAGATATGGATTGTCCATAGGCAGCGAGAAAGAAGTACCGTTCTTCCTCCTAATTTTGATGGAGGGTTCTTATGCAATTGAGTCACACCAGGTTGCACCTTCCTCCCACCATGTCAATCTGTGGGTATCTCACGGGGGTGGGCAACCTTCTTCTTCCCTACCGCTTCAACCTTCATCTTCTCTTCCGCTTCATGAACTTCCATTTTTTGAAGGCTTCCCAGTGCATTTCCACCCTTGCGTCCTCTTCCGTTTTTCCAGCGTAGCTTTCTCCTTTGTTTGTCTTCCACAGTCGCTTTGTCTTCCACCGTCGCTTTTCCACCACCGCTTTTCCGCCGTCTGCACGTTCTTCGTTTTTCGACCGTAG

Protein sequence

MGDLCYNDDLSGGGDFCDGGGLLISLPGRYGLSIGSEKEVPFFLLILMEGSYAIESHQVAPSSHHVNLWVSHGGGQPSSSLPLQPSSSLPLHELPFFEGFPVHFHPCVLFRFSSVAFSFVCLPQSLCLPPSLFHHRFSAVCTFFVFRP
Homology
[Close]
BLAST of MELO3C034426.jh1 vs. NCBI nr
Match: KAA0032211.1 (hypothetical protein E6C27_scaffold219G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 6.41e-07
Identity = 43/107 (40.19%), Postives = 51/107 (47.66%), Query Frame = 0 

Query: 13  GGDFCDGGGLLISLPGRYGLSIGSEKE-----------------------VPFFLLILME 72
           G DFC G  LL S     G SI SE+E                       V  FLL+ ME
Sbjct: 41  GEDFCGGEELLTSSREGGGFSISSEEEGIVSSWRSFAGWSSLVVSTSTLEVDAFLLVAME 100

Query: 73  GSYAIESHQVAPSSHHVNLWVSHGGGQPSSSLPLQPSSSLPLHELPF 96
            SYA ES+QVA +S+HVNLWVS  G   S +     +S L L +L F
Sbjct: 101 DSYAAESYQVASASYHVNLWVSRKGASTSDT-----TSPLLLEKLRF 142

[Close]
BLAST of MELO3C034426.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SRP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00230 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.10e-07
Identity = 43/107 (40.19%), Postives = 51/107 (47.66%), Query Frame = 0 

Query: 13  GGDFCDGGGLLISLPGRYGLSIGSEKE-----------------------VPFFLLILME 72
           G DFC G  LL S     G SI SE+E                       V  FLL+ ME
Sbjct: 41  GEDFCGGEELLTSSREGGGFSISSEEEGIVSSWRSFAGWSSLVVSTSTLEVDAFLLVAME 100

Query: 73  GSYAIESHQVAPSSHHVNLWVSHGGGQPSSSLPLQPSSSLPLHELPF 96
            SYA ES+QVA +S+HVNLWVS  G   S +     +S L L +L F
Sbjct: 101 DSYAAESYQVASASYHVNLWVSRKGASTSDT-----TSPLLLEKLRF 142

The following BLAST results are available for this feature:
BLAST of MELO3C034426.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032211.16.41e-0740.19hypothetical protein E6C27_scaffold219G00230 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034426.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034426.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SRP83.10e-0740.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C034426.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034426.jh1.t1MELO3C034426.jh1.t1mRNA