MELO3C034328 (gene) Melon (DHL92) v4

Overview
NameMELO3C034328
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 8871669 .. 8875661 (-)
RNA-Seq ExpressionMELO3C034328
SyntenyMELO3C034328
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGGAAGCCTCTAGAAACAAACGCTTGCAGTTGGTGGAACAAGTCATTGAAGAACTTCGAAAGGAGTAATCAGATATACAACAATCGATAGTTGATTTGACTAATCTAATCATTCGAATTCATGTGCAACCCATCGAAGAAGTTGCACCAATTCAACCTCGAAGAAATGTTCTTGCGGCAAATCAAGAACGACTAAATCAACAAGAAGTATGACCAAAATACCAAGCTATACATGATTGTTTTTTTTTTTTTTTACTACATTAATACTCCAGAATACAAGAAGGTTCGGTTGGTGGCCTTCAAGCTCCAAGGTGGTGCCAGTGCGTGGTGGGATCAACTACAAAATAACAGGCGACTATTAGGTAAACAACATATTAGAAGCTGGCCAAAGATGCTAAGGGTCATGAAAAAACGATTTCTGTAACGCCCCAACAAATTCGATTTTTGTTCATTTGTTATTAATATTTAAGTGTGGTTATGGAAAATTCAAATTTATTGGAAGAACCTTATCATTTTGAATTTTGCGATTAATTAAGGTTTGGGATTTTTCATTTTGTTTAGATATTAAGTATTTTTTTTATTATTTGGAAATTAATTGGTGAATTATTGTTAAATGAAAGGTTGGTTGGTTGAAAGTTTTGTGAGATTTGGAGAGAGAGAAGATGGTTGGTTTTGATTTAATTAAAGGAAAAGAAAAGAGATTTTTCTTTTATATAAAGGAGCTTTGGGTCCCGTGTGTAACGACCCAACTTTCCGGACTAAGCTGAGGTCACTACCAAACACCAAAACTCGACCATTCAACATAAAATTTAAAACGGACCAGATAAGATTCATTAAAACATTATAAACCTTACAAAAGACAGTTTCGGGCCCTATTTTAAATAATTCAAAAAAAAAATCACAAAATAAAATGTCAAGTCACCAGTCCAAAATCACAAGTCAAAATATTCTAACAAAATACATAGCGGGAGCGAAAAGAAAACCAGACGCATCCATATGGCCTTCACGCATCCTTCCTGCCTCTCGTCGGTCTGCCCCTCGCTGTACCCCTACCTGAAAAGTTAAAGAAGAAAAAGGGTGAGTATAAACATACCCAGTAAGGGACCCACTACTGGGCCCGTTAGGGGACAACAGTTAACTTCCTATTCGGGGGTACCCTACATAACAGTCTAGTGGTTCCGTAGAACGCACATATCAGTCTAGTGCTCCTGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCTGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGACGCACATATCCGTAAGGCACACTACCCCATAGATGAAGCTAACCGTTACCCCTCAGTCCAAACTAAACTGTCTACATCAGCCACATCCCAACGACATTCATATCACAGTCCCGCCATAGGCTTTGTCAGTCAGATAGTATAGGTTTAAACATCTACACCCTCAGTTGCTATATGCATTACCGATTCGCACACCAATAGGGGAAACCCTAGGTCCAATCGACTAACCAACCCAAAACCGGACTCACTGTCTTTCCCCGTCCAAACTCCATGAACCACATCCAGACCAGTGTTTTACTACATACTGAACTGTAACTTTAAGGTCCATCAACATAAAATCTCAATCCACAAATAGCAGTCACAGTATATTTACATCAGACAAAAAAATAATATCAGTACTTAACAGTCAGCAAGCATACAGATATTCAGTACAGTCGCTAACGTGTAATTCCCCTGTGGATTACTACGTTTTCAGCCTGGATTCGGGGTCCAGTAGTAGGAAAACCCTTACCTGATACTCGGTTATGCCCCTCGATCGAAATCCACGCTCGACAGATCCACCTAACGAAACACGAAAGTTTTAGTTGATGACTTTAGTAGAAGTCGTTAAAAAAAAGGTCGGAAGCGACATCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTGCCGCGGAATCCGAGAACTTAAGCGTCAACCCTGTACTACATTCAAGGGAGAAAAGTAGGGCCATATCTTAATCCAACATTTAAACTCGAATCGGACGAGGTAACATTAGGGAATTCATCAAAACAATCCTTACCGAAGACTCACCGTGAACCGAAGTGGAGGAAGGAAGGCTTAGGTGGCTCGGCTCGACTCGGCTCGGCTTGGTTCTCAGCTCGGCTCGTCTCGGCTCGGCTCGGCTTGGTTCTCGGCTCGGCTCGGCTTGGTTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTTGGTTCGGCTCGCGGTTCGGCTCACTTGGCTCGCGGCTCGGCTTGGTTCGGCTCGCGGCTCGGCTTGGTTCACGCGGCTCGCTCGGCTCGGCTGGAAGTGGTTTCGGGTCGGGTCAGCTTGGAACCGGGTCGGGTTGGCTTGGAACCGGGTCGGGTTGGGCGAAACGGGCAGCACGGTTTTTGGAGGGCTTTCTCTCTTCCGGCGACGGCGGCGGTGGCGAAACGACGCTGGGAGGCGTTACGGAAGATGGAGACGGAGCTGGCTGTTTCGTGGAGCGGCGACGAGCGGCGGCAGATCCGCCGTTGTGTGAGGCCGAGAAGGAAATCGGAAATGGATGGGGAGCCGCGGCGGACGACGATGGCTGGTGGCTACCCCACGGATGAAGACGGAGAGGAAAAGAGATGTGGCGGAGACGACGGACGAAGAAGAAGAAGAAGCGGCGGCGGTGGTCGGGCGAAGGATGGAGGAAGAAGAGAAAATGGATGGCGGCGCACGGTGGAGAGAAAACGAAAACGAAAAATCGGGGGGGGGGGGGGTAGGCGGCGCGCGAATTAGGGTTTGTTTTAAAAAAAAAATTTATTATATATATATATATATATATAATTCTTAATAATTATATAATATTAATAATTTAAATTAAATAATAATATATATATTAAATAATAATAATAATAATAATAATAAAGTAATAATAATATATATTAATAATATTAATATTAAATAAATAATAATTTATTATTATGTAATAATAATATTCTATAATATTAATTAATAATAATAATTATAATATTAATATTATAACAAATAAAATAAATATTAATAATAATAATATAATTAATATTATATTATTATTATATCAACTTGCACTTTACATAAAACGAGAAAAATTTTTACCTTAAATTTTTGGAGCGTTACACCGTGCATAAGAAAGAAAAATCAAAAAAAGAAAGAGGGAAAAAGAAAAGAGAAAAGGAAGAGAAAAAACACCCTAGCCGCCGTCGCCGCCGCGTACCGGAGTCGCCCAAGCCCTCTTCTTTCTTTTTGTCAGCTCAGCCGAATCGTTCGCAGCCGCCAGCCGTCGCGTGAAGCCTCGTCCTGCCGTGTCGCCGAGCAGCAGCAGTCGACGGTCGTCAGCCGCGCGCCTCCAGTCGTCGAAGCCGAACACATGTTTCGATCGTCGCCCGAACCCGAAGCCGAACCCACGTTCGGCCGACGCCCGAACCCGAAGCCGACCCGCGCCTGCTCGCTCGCCCGCACACCGCTCCACGCCCGCGCACGCCCGCTCCGAGTCGCAAGCCGAGCCCGCGCGCGTCCATCCCACGCCGTGAGCCGCACCTGTCTGCGCCACGAGCAGTGCCTGTCTGCGCTGCGAGCCGAGCCGGGTTCCTGCTCCTCCAGCCGAGCCGCCGAGCCTAGTTGGCTCTTTTCCACCCAATTTTTGGTAAATTGATTATTTGTTTTGGCTTACCCAGCAAGACTCAATTTTTGGAAACTAAATAATTTAATTTGGACTAAATTAAATTCTCTTTTAAGGCCACCTTGGACGATTTGACTTGGAGCGTTGGATTTCTTCGGTAGGGGCTCAAGCATTGCAACCTCCACCTAGGGTAAGTC

mRNA sequence

ATGGATGTGGAAGCCTCTAGAAACAAACGCTTGCAGTTGGTGGAACAAAATACAAGAAGGTTCGGTTGGTGGCCTTCAAGCTCCAAGGTGGTGCCAGTGCGTGGCCACCTTGGACGATTTGACTTGGAGCGTTGGATTTCTTCGGTAGGGGCTCAAGCATTGCAACCTCCACCTAGGGTAAGTC

Coding sequence (CDS)

ATGGATGTGGAAGCCTCTAGAAACAAACGCTTGCAGTTGGTGGAACAAAATACAAGAAGGTTCGGTTGGTGGCCTTCAAGCTCCAAGGTGGTGCCAGTGCGTGGCCACCTTGGACGATTTGACTTGGAGCGTTGGATTTCTTCGGTAGGGGCTCAAGCATTGCAACCTCCACCTAGGGTAAGT

Protein sequence

MDVEASRNKRLQLVEQNTRRFGWWPSSSKVVPVRGHLGRFDLERWISSVGAQALQPPPRVS
Homology
[Close]
BLAST of MELO3C034328 vs. NCBI nr
Match: KAA0051439.1 (hypothetical protein E6C27_scaffold55G001920 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 7.8e-06
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 25  PSSSKVVPVRGHLGRFDLERWISSVGAQALQPPPR 60
           PS +   P+ GHLGRFDLERWISSVGAQALQP PR
Sbjct: 116 PSLALFHPIFGHLGRFDLERWISSVGAQALQPRPR 150

[Close]
BLAST of MELO3C034328 vs. NCBI nr
Match: KAA0031843.1 (hypothetical protein E6C27_scaffold848G00930 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 36  HLGRFDLERWISSVGAQALQPPPRV 61
           HLGRFDLERWISSVGAQALQP PRV
Sbjct: 77  HLGRFDLERWISSVGAQALQPRPRV 101

[Close]
BLAST of MELO3C034328 vs. ExPASy TrEMBL
Match: A0A5A7UDC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001920 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-06
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 25  PSSSKVVPVRGHLGRFDLERWISSVGAQALQPPPR 60
           PS +   P+ GHLGRFDLERWISSVGAQALQP PR
Sbjct: 116 PSLALFHPIFGHLGRFDLERWISSVGAQALQPRPR 150

[Close]
BLAST of MELO3C034328 vs. ExPASy TrEMBL
Match: A0A5A7SNL6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00930 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 36  HLGRFDLERWISSVGAQALQPPPRV 61
           HLGRFDLERWISSVGAQALQP PRV
Sbjct: 77  HLGRFDLERWISSVGAQALQPRPRV 101

The following BLAST results are available for this feature:
BLAST of MELO3C034328 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051439.17.8e-0677.14hypothetical protein E6C27_scaffold55G001920 [Cucumis melo var. makuwa][more]
KAA0031843.14.3e-0496.00hypothetical protein E6C27_scaffold848G00930 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034328 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034328 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UDC33.8e-0677.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SNL62.1e-0496.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C034328 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034328.1MELO3C034328.1mRNA