MELO3C034327 (gene) Melon (DHL92) v4

Overview
NameMELO3C034327
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr10: 8638415 .. 8639338 (+)
RNA-Seq ExpressionMELO3C034327
SyntenyMELO3C034327
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACAATGTTCCTCGAGTTTGCAGATAATTTAGATAACCTTGCGGGAGGATCGTCGTCGGTGGGCGACAATTTGAGTGAGTTTAATAATGGTATACATTTGAACTTATGATTATTTCAAGTTTTTTTTTCTAATAATATATGTTCTAATAATTTATTGAGTATGGTTATCTTCTCAACCATCTGCAACTTTGACTCTTAGAAGATGTGCGCAGTCTCGACTCTTAAAATTGGAGCGCTACGTTGCAGCCAATTCGTGGATTTTGATGACGATCACCCCTAATGCGGAGAAGCTTTCACCACACGCTGTTCACTTAAGCCAGGCAATAGGCGTGTGTGTTCGAAAGAAATTTCTTGTCTGTTACCTTAAGTGGGCAGACGTAGGTAGAGAATACATCGAGGTCGTCAAGGGCGACCTCCAGGTAAGTCCACTACAAATTTAAAGAGTTAACCAAGCTAATGTATTGTTTATGTAATGTGTAGCGGTTTTTTATGCTTGATTTCAATGATCAAGCAATGAATAGGTTCATTGAGCATTAGATGCTCAACACCTTTAAAGAGTTTCGGGGCGATTGTCACAGACACTTCAAAAAGTAGAGCGACCCCGAGGAGGCTCGTGCCAACCGACCACACCTATTGATGGGACATGATGAGGATTGACACTTCCTCTGTGACCATTACATGAGCTATGCATTCCAAGTGAGTAACTAAACCCTTTGTCACGGTTAATTATGATTTCAACTTTTAATATGTATAAGAAATAAAAAAAATATAATTATTTTCATGCAGGAGCAATCATGGACGAACAAGGCTGCTAGACAGAAGCAACCTTACAATCATGCAATAGGTCAAAGTTGTTTCTACAACGACAGCACGAGCTTCCTGAGCAAAGAATGGAGCCAGTCGATTGTGTGGAGTTGTT

mRNA sequence

ATGGATACAATGTTCCTCGAGTTTGCAGATAATTTAGATAACCTTGCGGGAGGATCGTCGTCGGTGGGCGACAATTTGAGTGAGTTTAATAATGTATGGTTATCTTCTCAACCATCTGCAACTTTGACTCTTAGAAGATGTGCGCAGTCTCGACTCTTAAAATTGGAGCGCTACGTTGCAGCCAATTCGTGGATTTTGATGACGATCACCCCTAATGCGGAGAAGCTTTCACCACACGCTGTTCACTTAAGCCAGGCAATAGGCGTGTGTGTTCGAAAGAAATTTCTTGTCTGTTACCTTAAGTGGGCAGACGTAGGTAGAGAATACATCGAGGTCGTCAAGGGCGACCTCCAGCGGTTTTTTATGCTTGATTTCAATGATCAAGCAATGAATAGGAGCAATCATGGACGAACAAGGCTGCTAGACAGAAGCAACCTTACAATCATGCAATAGGTCAAAGTTGTTTCTACAACGACAGCACGAGCTTCCTGAGCAAAGAATGGAGCCAGTCGATTGTGTGGAGTTGTT

Coding sequence (CDS)

ATGGATACAATGTTCCTCGAGTTTGCAGATAATTTAGATAACCTTGCGGGAGGATCGTCGTCGGTGGGCGACAATTTGAGTGAGTTTAATAATGTATGGTTATCTTCTCAACCATCTGCAACTTTGACTCTTAGAAGATGTGCGCAGTCTCGACTCTTAAAATTGGAGCGCTACGTTGCAGCCAATTCGTGGATTTTGATGACGATCACCCCTAATGCGGAGAAGCTTTCACCACACGCTGTTCACTTAAGCCAGGCAATAGGCGTGTGTGTTCGAAAGAAATTTCTTGTCTGTTACCTTAAGTGGGCAGACGTAGGTAGAGAATACATCGAGGTCGTCAAGGGCGACCTCCAGCGGTTTTTTATGCTTGATTTCAATGATCAAGCAATGAATAGGAGCAATCATGGACGAACAAGGCTGCTAGACAGAAGCAACCTTACAATCATGCAATAG

Protein sequence

MDTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAANSWILMTITPNAEKLSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRFFMLDFNDQAMNRSNHGRTRLLDRSNLTIMQ
Homology
BLAST of MELO3C034327 vs. NCBI nr
Match: KAA0038961.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 4.7e-44
Identity = 103/149 (69.13%), Postives = 116/149 (77.85%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFLEF ++LDN+AGGSSS+GD     N    SSQ  AT T RR AQSRLL+LER+VA 
Sbjct: 120 DAMFLEFENDLDNIAGGSSSLGD-----NTAGSSSQQPATPTPRRRAQSRLLELERHVAI 179

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI   A+K +SPH V  SQ IGVCVRK F VC LKWADVGREYIEVVKGDLQR 
Sbjct: 180 NGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLKWADVGREYIEVVKGDLQRL 239

Query: 122 FMLDFNDQAMNRSNHGRTRLLDRSNLTIM 150
            +LDFNDQAMN+SNHG+TRLLDRS+LTI+
Sbjct: 240 VVLDFNDQAMNKSNHGQTRLLDRSSLTII 263

BLAST of MELO3C034327 vs. NCBI nr
Match: TYK03145.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42
Identity = 100/149 (67.11%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D +FLEF D LDN  GGSSSVGD     N VW SSQ  AT T RR AQS+LL+L+R+VA 
Sbjct: 259 DAIFLEFEDELDNFTGGSSSVGD-----NTVWSSSQQPATPTPRRHAQSQLLELKRHVAV 318

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           +  ILMTI P  EK +SPH V  SQAIG+C+RK F VCYLKWADVGREYIE       RF
Sbjct: 319 HGCILMTIAPGVEKPISPHVVRFSQAIGMCMRKTFFVCYLKWADVGREYIE-------RF 378

Query: 122 FMLDFNDQAMNRSNHGRTRLLDRSNLTIM 150
           F+LDFN QAMNRSNH RTRLLDRSNLTI+
Sbjct: 379 FVLDFNGQAMNRSNHVRTRLLDRSNLTII 395

BLAST of MELO3C034327 vs. NCBI nr
Match: KAA0052205.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01774.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-40
Identity = 104/179 (58.10%), Postives = 118/179 (65.92%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           + +FLEFAD+LDNLAGGSSSVGDN         SSQP  TLT RR  QS+LL+LE YVA 
Sbjct: 22  NAIFLEFADDLDNLAGGSSSVGDNSES------SSQPFTTLTPRRRVQSQLLELEHYVAV 81

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N WI MTITP+AEK + PH V  SQ IGVCV+K FL+  LKW DVGREYIEV+K DLQ F
Sbjct: 82  NGWISMTITPSAEKPIFPHVVRFSQTIGVCVQKIFLLLCLKWTDVGREYIEVIKTDLQ-F 141

Query: 122 FMLDFNDQAMN------------------------------RSNHGRTRLLDRSNLTIM 150
           F+LDFNDQAMN                              RSNHGRTRLLD+S+LTI+
Sbjct: 142 FVLDFNDQAMNRRLEQTHQTYWWDVMRIYTSSVTTTCVVHSRSNHGRTRLLDKSSLTII 193

BLAST of MELO3C034327 vs. NCBI nr
Match: KAA0056616.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK24300.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 95/132 (71.97%), Postives = 104/132 (78.79%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFL+F D+LDN+AGGSSSVGDN +E      SS   AT T RR AQSRLL+LER+VA 
Sbjct: 4   DDMFLQFEDDLDNIAGGSSSVGDNTAE------SSSQQATPTPRRRAQSRLLELERHVAI 63

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI P AEK +SP+AVH SQAIGVCVRK F V  LKW DVGREYIEVVKGDLQRF
Sbjct: 64  NGCIPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRF 123

Query: 122 FMLDFNDQAMNR 133
           F+LDFNDQAMNR
Sbjct: 124 FVLDFNDQAMNR 129

BLAST of MELO3C034327 vs. NCBI nr
Match: TYK29029.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 4.5e-39
Identity = 92/132 (69.70%), Postives = 101/132 (76.52%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFLEF D+LDN+AG SSS+G+     N    SSQ  AT TLRR  QSRLL+LER+VA 
Sbjct: 574 DAMFLEFEDDLDNIAGWSSSMGE-----NTTGSSSQQPATPTLRRRVQSRLLELERHVAI 633

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI P  EK +SPHA+H  QAIGVCVRK F VC LKWADVGREYIEVVKGDLQR 
Sbjct: 634 NGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYIEVVKGDLQRL 693

Query: 122 FMLDFNDQAMNR 133
           F+LDFNDQAMNR
Sbjct: 694 FVLDFNDQAMNR 700

BLAST of MELO3C034327 vs. ExPASy TrEMBL
Match: A0A5A7TBG7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00370 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 103/149 (69.13%), Postives = 116/149 (77.85%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFLEF ++LDN+AGGSSS+GD     N    SSQ  AT T RR AQSRLL+LER+VA 
Sbjct: 120 DAMFLEFENDLDNIAGGSSSLGD-----NTAGSSSQQPATPTPRRRAQSRLLELERHVAI 179

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI   A+K +SPH V  SQ IGVCVRK F VC LKWADVGREYIEVVKGDLQR 
Sbjct: 180 NGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLKWADVGREYIEVVKGDLQRL 239

Query: 122 FMLDFNDQAMNRSNHGRTRLLDRSNLTIM 150
            +LDFNDQAMN+SNHG+TRLLDRS+LTI+
Sbjct: 240 VVLDFNDQAMNKSNHGQTRLLDRSSLTII 263

BLAST of MELO3C034327 vs. ExPASy TrEMBL
Match: A0A5D3BVP6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00200 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 100/149 (67.11%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D +FLEF D LDN  GGSSSVGD     N VW SSQ  AT T RR AQS+LL+L+R+VA 
Sbjct: 259 DAIFLEFEDELDNFTGGSSSVGD-----NTVWSSSQQPATPTPRRHAQSQLLELKRHVAV 318

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           +  ILMTI P  EK +SPH V  SQAIG+C+RK F VCYLKWADVGREYIE       RF
Sbjct: 319 HGCILMTIAPGVEKPISPHVVRFSQAIGMCMRKTFFVCYLKWADVGREYIE-------RF 378

Query: 122 FMLDFNDQAMNRSNHGRTRLLDRSNLTIM 150
           F+LDFN QAMNRSNH RTRLLDRSNLTI+
Sbjct: 379 FVLDFNGQAMNRSNHVRTRLLDRSNLTII 395

BLAST of MELO3C034327 vs. ExPASy TrEMBL
Match: A0A5A7UES6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00020 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.2e-41
Identity = 104/179 (58.10%), Postives = 118/179 (65.92%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           + +FLEFAD+LDNLAGGSSSVGDN         SSQP  TLT RR  QS+LL+LE YVA 
Sbjct: 22  NAIFLEFADDLDNLAGGSSSVGDNSES------SSQPFTTLTPRRRVQSQLLELEHYVAV 81

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N WI MTITP+AEK + PH V  SQ IGVCV+K FL+  LKW DVGREYIEV+K DLQ F
Sbjct: 82  NGWISMTITPSAEKPIFPHVVRFSQTIGVCVQKIFLLLCLKWTDVGREYIEVIKTDLQ-F 141

Query: 122 FMLDFNDQAMN------------------------------RSNHGRTRLLDRSNLTIM 150
           F+LDFNDQAMN                              RSNHGRTRLLD+S+LTI+
Sbjct: 142 FVLDFNDQAMNRRLEQTHQTYWWDVMRIYTSSVTTTCVVHSRSNHGRTRLLDKSSLTII 193

BLAST of MELO3C034327 vs. ExPASy TrEMBL
Match: A0A5A7UQN2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00680 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 9.8e-40
Identity = 95/132 (71.97%), Postives = 104/132 (78.79%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFL+F D+LDN+AGGSSSVGDN +E      SS   AT T RR AQSRLL+LER+VA 
Sbjct: 4   DDMFLQFEDDLDNIAGGSSSVGDNTAE------SSSQQATPTPRRRAQSRLLELERHVAI 63

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI P AEK +SP+AVH SQAIGVCVRK F V  LKW DVGREYIEVVKGDLQRF
Sbjct: 64  NGCIPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRF 123

Query: 122 FMLDFNDQAMNR 133
           F+LDFNDQAMNR
Sbjct: 124 FVLDFNDQAMNR 129

BLAST of MELO3C034327 vs. ExPASy TrEMBL
Match: A0A5D3E035 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001440 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.2e-39
Identity = 92/132 (69.70%), Postives = 101/132 (76.52%), Query Frame = 0

Query: 2   DTMFLEFADNLDNLAGGSSSVGDNLSEFNNVWLSSQPSATLTLRRCAQSRLLKLERYVAA 61
           D MFLEF D+LDN+AG SSS+G+     N    SSQ  AT TLRR  QSRLL+LER+VA 
Sbjct: 574 DAMFLEFEDDLDNIAGWSSSMGE-----NTTGSSSQQPATPTLRRRVQSRLLELERHVAI 633

Query: 62  NSWILMTITPNAEK-LSPHAVHLSQAIGVCVRKKFLVCYLKWADVGREYIEVVKGDLQRF 121
           N  I MTI P  EK +SPHA+H  QAIGVCVRK F VC LKWADVGREYIEVVKGDLQR 
Sbjct: 634 NGRIPMTIAPGVEKPISPHAIHFGQAIGVCVRKTFFVCCLKWADVGREYIEVVKGDLQRL 693

Query: 122 FMLDFNDQAMNR 133
           F+LDFNDQAMNR
Sbjct: 694 FVLDFNDQAMNR 700

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038961.14.7e-4469.13CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK03145.13.3e-4267.11CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0052205.11.1e-4058.10CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01774.1 CACTA en-... [more]
KAA0056616.12.0e-3971.97CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK24300.1 CACTA en-... [more]
TYK29029.14.5e-3969.70CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TBG72.3e-4469.13CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BVP61.6e-4267.11CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7UES65.2e-4158.10CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7UQN29.8e-4071.97CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3E0352.2e-3969.70CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034327.1MELO3C034327.1mRNA