MELO3C034323 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034323
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Proline transporter 1
Location	chr10: 8308224 .. 8308586 (+)
RNA-Seq Expression	MELO3C034323
Synteny	MELO3C034323

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

mRNA sequence

ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

Coding sequence (CDS)

ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

Protein sequence

MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCSLLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKSRGFTSRGRNVSQ

Homology

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BLAST of MELO3C034323 vs. NCBI nr
Match: RWR97332.1 (hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 104.8 bits (260), Expect = 5.4e-19
Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           M L+SGF   +LGT TV TPFS+ AFTSSTLAFSG+LN L N PLL S       FS  S
Sbjct: 43  MALMSGFLTCSLGTVTVSTPFSIAAFTSSTLAFSGNLNRLRNLPLLLSTRCHLSFFSSFS 102

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LLL PLI RTLPSS+ T TS    PG SA+K WA GVSFQS+ ++ K+
Sbjct: 103 LLLSPLIYRTLPSSSSTFTSSFFRPGRSALKTWASGVSFQSIQALTKA 150

[Close]

BLAST of MELO3C034323 vs. NCBI nr
Match: BAS70261.1 (Os01g0136050, partial [Oryza sativa Japonica Group])

HSP 1 Score: 101.3 bits (251), Expect = 6.0e-18
Identity = 66/108 (61.11%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           M   SGF  S LGT TV TPFSMLAFT STLAFSGSLN  MNCPLLRS        S  S
Sbjct: 22  MAFTSGFLTSALGTVTVSTPFSMLAFTWSTLAFSGSLNRRMNCPLLRSTRCHLSFLSSFS 81

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLI  TLPSST T TS  L PG SA+K    GVSFQS  ++ K+
Sbjct: 82  LLRCPLITSTLPSSTSTFTSSFLTPGRSALKTCDSGVSFQSTRALAKA 129

[Close]

BLAST of MELO3C034323 vs. NCBI nr
Match: VFQ82571.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 63/102 (61.76%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGFF S+LGT TV TPFSM AFT S  AFSGS N   N PLLRS       FS  S
Sbjct: 1   MDLTSGFFTSSLGTVTVSTPFSMDAFTWSNFAFSGSRNRRRNLPLLRSRRCHLSSFSSFS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSM 103
           LLL PLIC+ LPSST T TS    PG SA+  W  GVSFQS+
Sbjct: 61  LLLSPLICKILPSSTSTFTSSFFSPGRSALNTWLSGVSFQSI 102

[Close]

BLAST of MELO3C034323 vs. NCBI nr
Match: CAG1834096.1 (unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 64/101 (63.37%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF   +LGT TV TPFSM AFT STLAFSG  NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLTPSLGTVTVSTPFSMAAFTCSTLAFSGRRNLRRNLPLLRSTRCQVSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQS 102
            L  PLI RT PSST T+TS  L PG SA+   A GVSFQS
Sbjct: 61  RLRSPLIRRTRPSSTSTMTSSFLSPGKSALNTCASGVSFQS 101

[Close]

BLAST of MELO3C034323 vs. NCBI nr
Match: MQM03126.1 (hypothetical protein [Colocasia esculenta])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 65/106 (61.32%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 3   LISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCSLL 62
           L SGFF S+LGT TV TPFSM AFT ST AFSGS N L   P LRSI     VFS  SL 
Sbjct: 95  LTSGFFTSSLGTVTVSTPFSMEAFTWSTWAFSGSRNRLTKLPPLRSIRCQVSVFSSFSLR 154

Query: 63  LYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           L+PLI R  PSST T TS LL PG SA+  WA GVSFQS  ++ K+
Sbjct: 155 LWPLIWRIRPSSTSTFTSSLLTPGRSALNTWASGVSFQSTRALAKA 200

[Close]

BLAST of MELO3C034323 vs. ExPASy TrEMBL
Match: A0A0A0KSC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197120 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDLISGFF S LGT TVRTPFSMLAFTSSTLAFSGSLNLLMN P LRSI      FS CS
Sbjct: 3   MDLISGFFSSILGTITVRTPFSMLAFTSSTLAFSGSLNLLMNFPQLRSILCHLSFFSSCS 62

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LLL PLIC+TLPSST TLTS  LIPG SA+KMWACGVSFQSM  + K+
Sbjct: 63  LLLSPLICKTLPSSTSTLTSSFLIPGRSALKMWACGVSFQSMRVLAKA 110

[Close]

BLAST of MELO3C034323 vs. ExPASy TrEMBL
Match: A0A443Q2S3 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02676000 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           M L+SGF   +LGT TV TPFS+ AFTSSTLAFSG+LN L N PLL S       FS  S
Sbjct: 43  MALMSGFLTCSLGTVTVSTPFSIAAFTSSTLAFSGNLNRLRNLPLLLSTRCHLSFFSSFS 102

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LLL PLI RTLPSS+ T TS    PG SA+K WA GVSFQS+ ++ K+
Sbjct: 103 LLLSPLIYRTLPSSSSTFTSSFFRPGRSALKTWASGVSFQSIQALTKA 150

[Close]

BLAST of MELO3C034323 vs. ExPASy TrEMBL
Match: I1P9U5 (SHSP domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM A   S L FSGS NL  N PLLRS      VFS CS
Sbjct: 611 MDLTSGFLGSSLGTVTVSTPFSMDALICSGLVFSGSRNLRRNLPLLRSTRCHLSVFSSCS 670

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLICR LPSST TLTS    PG+SA+   A GVSFQSM +  K+
Sbjct: 671 LLRSPLICRMLPSSTSTLTSSFFSPGTSALNTCASGVSFQSMRAPAKA 718

[Close]

BLAST of MELO3C034323 vs. ExPASy TrEMBL
Match: T1MGU4 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM AFT S LAFSGS NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLASSLGTVTVSTPFSMDAFTCSALAFSGSRNLRRNLPLLRSTRCQVSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           L   PLI R LPSST T TS    PG+SA+   A GVSFQSM +  K+
Sbjct: 61  LFRSPLIWRMLPSSTSTFTSSFFSPGTSALNTCASGVSFQSMRAPAKA 108

[Close]

BLAST of MELO3C034323 vs. ExPASy TrEMBL
Match: A0A0D9Z549 (SHSP domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM A   S L FSGS NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLGSSLGTVTVSTPFSMDALICSGLVFSGSRNLRRNLPLLRSTRCHLSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLICR LPSST TLTS    PG+SA+   A GVSFQSM +  K+
Sbjct: 61  LLRSPLICRMLPSSTSTLTSSFFSPGTSALNTCASGVSFQSMRAPAKA 108

The following BLAST results are available for this feature:

BLAST of MELO3C034323 vs. NCBI nr


Match Name	E-value	Identity	Description
RWR97332.1	5.4e-19	60.19	hypothetical protein CKAN_02676000 [Cinnamomum micranthum f. kanehirae]	[more]
BAS70261.1	6.0e-18	61.11	Os01g0136050, partial [Oryza sativa Japonica Group]	[more]
VFQ82571.1	1.0e-17	61.76	unnamed protein product [Cuscuta campestris]	[more]
CAG1834096.1	1.0e-17	63.37	unnamed protein product [Musa acuminata subsp. malaccensis]	[more]
MQM03126.1	1.7e-17	61.32	hypothetical protein [Colocasia esculenta]	[more]

BLAST of MELO3C034323 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSC0	1.0e-31	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197120 PE=4 SV=1	[more]
A0A443Q2S3	2.6e-19	60.19	Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_...	[more]
I1P9U5	1.0e-18	61.11	SHSP domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1	[more]
T1MGU4	1.0e-18	61.11	Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1	[more]
A0A0D9Z549	1.0e-18	61.11	SHSP domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1	[more]

BLAST of MELO3C034323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034323.1	MELO3C034323.1	mRNA