MELO3C034287 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034287
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr10: 7330774 .. 7331410 (-)
RNA-Seq Expression	MELO3C034287
Synteny	MELO3C034287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTATAATGACAAACCACATAGCCACATATTTATGTAGTTTATATATTTTGATTCTATGTGTTCGTATTTGCTTATTTAATGTTTGTTTTTTATGTCCATAAGCATTATGTCATCGTCATACACACGTCATAAGTTTTTGGAGGCGGACGCTATGTTTCTCGAGTTTGAGGGCGAGTTAGATAACTTTTCGAGAGGGTCGTCGTCCGTGGGCGACAATGCGAGTGAGTACAAAAATTTCTTTCATTTTAACTTATGATTATTTCATGTTTTTTTTTTCTCTAACATTATATTGAGTAGGGTTGTCTTCTCAACAATCTGGGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCACGTTGCAGTACATGAACACATTTCGATGACGATCGTTCCTGGTGCGGAGAAACCTATTTCCCCACAAGTCATTCGCTTCAGCCAGACGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGCCTGAAGTGTACGAGGAGATTATGAGGTTCAGAAAGCTTAAAATGTATGATGTTTTCCTTAACCCTAATTTTGTTTAACTAGGGTGTTTAATTTGGGGCTGACAAGAAGAATAGCAAAATAGAAAGTTTACTTTG

mRNA sequence

AAATTATAATGACAAACCACATAGCCACATATTTATGTAGTTTATATATTTTGATTCTATGTGTTCGTATTTGCTTATTTAATGTTTGTTTTTTATGTCCATAAGCATTATGTCATCGTCATACACACGTCATAAGTTTTTGGAGGCGGACGCTATGTTTCTCGAGTTTGAGGGCGAGTTAGATAACTTTTCGAGAGGGTCGTCGTCCGTGGGCGACAATGCGAGGTTGTCTTCTCAACAATCTGGGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCACGTTGCAGTACATGAACACATTTCGATGACGATCGTTCCTGGTGCGGAGAAACCTATTTCCCCACAAGTCATTCGCTTCAGCCAGACGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGCCTGAAGTGTACGAGGAGATTATGAGGTTCAGAAAGCTTAAAATGTATGATGTTTTCCTTAACCCTAATTTTGTTTAACTAGGGTGTTTAATTTGGGGCTGACAAGAAGAATAGCAAAATAGAAAGTTTACTTTG

Coding sequence (CDS)

ATGTCCATAAGCATTATGTCATCGTCATACACACGTCATAAGTTTTTGGAGGCGGACGCTATGTTTCTCGAGTTTGAGGGCGAGTTAGATAACTTTTCGAGAGGGTCGTCGTCCGTGGGCGACAATGCGAGGTTGTCTTCTCAACAATCTGGGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCACGTTGCAGTACATGAACACATTTCGATGACGATCGTTCCTGGTGCGGAGAAACCTATTTCCCCACAAGTCATTCGCTTCAGCCAGACGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGCCTGAAGTGTACGAGGAGATTATGA

Protein sequence

MSISIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL

Homology

[Close]

BLAST of MELO3C034287 vs. NCBI nr
Match: KAA0051610.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK30784.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 6   MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE 65
           MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE
Sbjct: 1   MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE 60

Query: 66  LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL 119
           LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL
Sbjct: 61  LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL 113

[Close]

BLAST of MELO3C034287 vs. NCBI nr
Match: KAA0046834.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 5.9e-34
Identity = 80/107 (74.77%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 9   SYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLELER 68
           SY R  F+E D MFL+FE +LDN + GSSSVGDN R SSQQ+ TPTPRRRAQSRLLELER
Sbjct: 256 SYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQT-TPTPRRRAQSRLLELER 315

Query: 69  HVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCT 116
           HVA++  I MTI PGAEKPISP  +RFSQ IGVCVRKTFPVRCLK T
Sbjct: 316 HVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWT 361

[Close]

BLAST of MELO3C034287 vs. NCBI nr
Match: KAA0038961.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 5.9e-34
Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 4   SIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDN-ARLSSQQSGTPTPRRRAQSR 63
           +IMSSSY R+ F+E DAMFLEFE +LDN + GSSS+GDN A  SSQQ  TPTPRRRAQSR
Sbjct: 105 TIMSSSYQRNNFMETDAMFLEFENDLDNIAGGSSSLGDNTAGSSSQQPATPTPRRRAQSR 164

Query: 64  LLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLK 114
           LLELERHVA++  I MTI  GA+KPISP  +RFSQTIGVCVRKTFPV CLK
Sbjct: 165 LLELERHVAINGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLK 215

[Close]

BLAST of MELO3C034287 vs. NCBI nr
Match: TYJ99698.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33
Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   SISIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQS 61
           S +++  SY R  F+E D MFL+FE +LDN + GSSSVGDN   SS Q  TPTPRRRAQS
Sbjct: 88  SATLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQS 147

Query: 62  RLLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCT 116
           RLLELERHVA++  I MTI PGAEKPISP  +RFSQ IGVCVRKTFPVRCLK T
Sbjct: 148 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWT 201

[Close]

BLAST of MELO3C034287 vs. NCBI nr
Match: KAA0045433.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 5.0e-33
Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 3   ISIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSR 62
           + I+  SY R  F+E D MFL+FE +L+N   GSSSVGDN   SS Q  TPTPRRRAQSR
Sbjct: 106 VHIVIMSYRRSNFMETDDMFLQFEEDLNNIVGGSSSVGDNTAGSSSQQTTPTPRRRAQSR 165

Query: 63  LLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLK 114
           LLELERH+A++  I MTI PGAEKPISP VIRFSQ IGVCVRKTFPVRCLK
Sbjct: 166 LLELERHIAINGRIPMTIAPGAEKPISPHVIRFSQAIGVCVRKTFPVRCLK 216

[Close]

BLAST of MELO3C034287 vs. ExPASy TrEMBL
Match: A0A5A7U8Y0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00030 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 6   MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE 65
           MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE
Sbjct: 1   MSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLE 60

Query: 66  LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL 119
           LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL
Sbjct: 61  LERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCTRRL 113

[Close]

BLAST of MELO3C034287 vs. ExPASy TrEMBL
Match: A0A5A7TBG7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00370 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34
Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 4   SIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDN-ARLSSQQSGTPTPRRRAQSR 63
           +IMSSSY R+ F+E DAMFLEFE +LDN + GSSS+GDN A  SSQQ  TPTPRRRAQSR
Sbjct: 105 TIMSSSYQRNNFMETDAMFLEFENDLDNIAGGSSSLGDNTAGSSSQQPATPTPRRRAQSR 164

Query: 64  LLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLK 114
           LLELERHVA++  I MTI  GA+KPISP  +RFSQTIGVCVRKTFPV CLK
Sbjct: 165 LLELERHVAINGCIPMTIAHGAKKPISPHTVRFSQTIGVCVRKTFPVCCLK 215

[Close]

BLAST of MELO3C034287 vs. ExPASy TrEMBL
Match: A0A5A7TUT1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001310 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34
Identity = 80/107 (74.77%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 9   SYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSRLLELER 68
           SY R  F+E D MFL+FE +LDN + GSSSVGDN R SSQQ+ TPTPRRRAQSRLLELER
Sbjct: 256 SYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQT-TPTPRRRAQSRLLELER 315

Query: 69  HVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCT 116
           HVA++  I MTI PGAEKPISP  +RFSQ IGVCVRKTFPVRCLK T
Sbjct: 316 HVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWT 361

[Close]

BLAST of MELO3C034287 vs. ExPASy TrEMBL
Match: A0A5D3BNG3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00960 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.9e-34
Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   SISIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQS 61
           S +++  SY R  F+E D MFL+FE +LDN + GSSSVGDN   SS Q  TPTPRRRAQS
Sbjct: 88  SATLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQS 147

Query: 62  RLLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLKCT 116
           RLLELERHVA++  I MTI PGAEKPISP  +RFSQ IGVCVRKTFPVRCLK T
Sbjct: 148 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWT 201

[Close]

BLAST of MELO3C034287 vs. ExPASy TrEMBL
Match: A0A5A7TPH1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00310 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 3   ISIMSSSYTRHKFLEADAMFLEFEGELDNFSRGSSSVGDNARLSSQQSGTPTPRRRAQSR 62
           + I+  SY R  F+E D MFL+FE +L+N   GSSSVGDN   SS Q  TPTPRRRAQSR
Sbjct: 106 VHIVIMSYRRSNFMETDDMFLQFEEDLNNIVGGSSSVGDNTAGSSSQQTTPTPRRRAQSR 165

Query: 63  LLELERHVAVHEHISMTIVPGAEKPISPQVIRFSQTIGVCVRKTFPVRCLK 114
           LLELERH+A++  I MTI PGAEKPISP VIRFSQ IGVCVRKTFPVRCLK
Sbjct: 166 LLELERHIAINGRIPMTIAPGAEKPISPHVIRFSQAIGVCVRKTFPVRCLK 216

The following BLAST results are available for this feature:

BLAST of MELO3C034287 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051610.1	2.3e-54	100.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK30784.1 CACTA en-...	[more]
KAA0046834.1	5.9e-34	74.77	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0038961.1	5.9e-34	73.87	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ99698.1	1.0e-33	69.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0045433.1	5.0e-33	70.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034287 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8Y0	1.1e-54	100.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TBG7	2.8e-34	73.87	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TUT1	2.8e-34	74.77	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BNG3	4.9e-34	69.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TPH1	2.4e-33	70.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C034287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034287.1	MELO3C034287.1	mRNA