MELO3C034232 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034232
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr01: 24483943 .. 24484890 (-)
RNA-Seq Expression	MELO3C034232
Synteny	MELO3C034232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTTTAACTATCCTGCAGTTATGGTAGTCTTTAGTTCAATTATAGTAGTTTATTTCTTATTAGTTTTGAATAACTTTGTTGTTGATTTAGGATGACTATCCTACAATCATGGTAGCCTTTTTTGTTTCAAATTTGTTTGTATTTCTGAGGGTTTGAAAGGGTGGTAGTGGGATAGCTTGTAAGGTAACGTTGTTGGAAGGGGTGGGTAGGATGCGAAGATTGAAGTTGTTTGTTGTTAATAATTAGGTTGTATTGACTATCCTGTAGTTATGGTAGCCTATGTACGTAATTTGAAGTTAGTTTTAGTGAAAATTTTGAAAGATTGTATATTCAGGGGAGTAAGTTTAGGATGTGAGAGGAGAGGAATATGTTTCTAATCAAACCTATTTATGTTTTAGGGACTTAAACGATGGACAAGGGTTGGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAAAGGGAGTGACCCAATTTTTAAAAGTTGTCAAGTTTCACATTGATGCCTACGAAAGAATAACGTGTCCATACATGAGATGTATGGACTTAAATTGGAACTTAATAGAGGGTATGGAACGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAAAGCCATTAAGCTTTAAAGGTACAAAACACTTTGAAAAATGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTAGTAGGCAGTTTGATGAAGAAGATGATATGTTTGGCATGTTCAATGATTTACAAGTCCTGATTGAACAGGAAGAGGAAACGGAGGAAGGTCGTTTGGAGGATGAAATGCCGAGGAATATTGGGGTAGATATAGATAAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTAGTACCTCAGTTGTTCTAAATTTTCATCCTTGAATTTTTTGGTTAAGTTAA

mRNA sequence

TAGTTTTAACTATCCTGCAGTTATGGGACTTAAACGATGGACAAGGGTTGGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAAAGGGAGTGACCCAATTTTTAAAAGTTGTCAAGTTTCACATTGATGCCTACGAAAGAATAACGTGTCCATACATGAGATGTATGGACTTAAATTGGAACTTAATAGAGGGTATGGAACGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAAAGCCATTAAGCTTTAAAGGTACAAAACACTTTGAAAAATGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTAGTAGGCAGTTTGATGAAGAAGATGATATGTTTGGCATGTTCAATGATTTACAAGTCCTGATTGAACAGGAAGAGGAAACGGAGGAAGGTCGTTTGGAGGATGAAATGCCGAGGAATATTGGGGTAGATATAGATAAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTAGTACCTCAGTTGTTCTAAATTTTCATCCTTGAATTTTTTGGTTAAGTTAA

Coding sequence (CDS)

ATGGACAAGGGTTGGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAAAGGGAGTGACCCAATTTTTAAAAGTTGTCAAGTTTCACATTGATGCCTACGAAAGAATAACGTGTCCATACATGAGATGTATGGACTTAAATTGGAACTTAATAGAGGGTATGGAACGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAAAGCCATTAA

Protein sequence

MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLLTIGISPTTQNGCIMESH

Homology

[Close]

BLAST of MELO3C034232 vs. NCBI nr
Match: KAA0056542.1 (uncharacterized protein E6C27_scaffold288G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-21
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK FLEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 214 MDKGWMKLRNKLFLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 273

Query: 61  TIGISP 67
           TIGISP
Sbjct: 274 TIGISP 279

[Close]

BLAST of MELO3C034232 vs. NCBI nr
Match: TYK16353.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
          MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 1  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 60

Query: 61 TIGISP 67
          TIGISP
Sbjct: 61 TIGISP 66

[Close]

BLAST of MELO3C034232 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 52  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 111

Query: 61  TIGISP 67
           TIGISP
Sbjct: 112 TIGISP 117

[Close]

BLAST of MELO3C034232 vs. NCBI nr
Match: TYK28867.1 (uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 130 MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 189

Query: 61  TIGISP 67
           TIGISP
Sbjct: 190 TIGISP 195

[Close]

BLAST of MELO3C034232 vs. NCBI nr
Match: TYJ99928.1 (uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.4e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 58  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 117

Query: 61  TIGISP 67
           TIGISP
Sbjct: 118 TIGISP 123

[Close]

BLAST of MELO3C034232 vs. ExPASy TrEMBL
Match: A0A5A7UL57 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00420 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK FLEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 214 MDKGWMKLRNKLFLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 273

Query: 61  TIGISP 67
           TIGISP
Sbjct: 274 TIGISP 279

[Close]

BLAST of MELO3C034232 vs. ExPASy TrEMBL
Match: A0A5D3BP89 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00540 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 58  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 117

Query: 61  TIGISP 67
           TIGISP
Sbjct: 118 TIGISP 123

[Close]

BLAST of MELO3C034232 vs. ExPASy TrEMBL
Match: A0A5D3CWU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
          MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 1  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 60

Query: 61 TIGISP 67
          TIGISP
Sbjct: 61 TIGISP 66

[Close]

BLAST of MELO3C034232 vs. ExPASy TrEMBL
Match: A0A5D3BA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001580 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 52  MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 111

Query: 61  TIGISP 67
           TIGISP
Sbjct: 112 TIGISP 117

[Close]

BLAST of MELO3C034232 vs. ExPASy TrEMBL
Match: A0A5D3DY98 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00070 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1   MDKGWMKLRNKFFLEYRKGVTQFLKVVKFHIDAYERITCPYMRCMDLNWNLIEGMERYLL 60
           MDKGWMKLRNK  LEYR GVTQFL+  KFH+DAY R+ CP  RC++LNW+ +EG+ER+LL
Sbjct: 130 MDKGWMKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLL 189

Query: 61  TIGISP 67
           TIGISP
Sbjct: 190 TIGISP 195

The following BLAST results are available for this feature:

BLAST of MELO3C034232 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056542.1	2.9e-21	72.73	uncharacterized protein E6C27_scaffold288G00420 [Cucumis melo var. makuwa]	[more]
TYK16353.1	2.4e-20	71.21	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ95864.1	2.4e-20	71.21	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
TYK28867.1	2.4e-20	71.21	uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]	[more]
TYJ99928.1	2.4e-20	71.21	uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034232 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UL57	1.4e-21	72.73	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BP89	1.2e-20	71.21	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CWU5	1.2e-20	71.21	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BA83	1.2e-20	71.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DY98	1.2e-20	71.21	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C034232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 3..66 e-value: 1.3E-8 score: 34.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034232.1	MELO3C034232.1	mRNA