MELO3C034222 (gene) Melon (DHL92) v4

Overview
NameMELO3C034222
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDrebrin-like
Locationchr01: 10690814 .. 10691014 (+)
RNA-Seq ExpressionMELO3C034222
SyntenyMELO3C034222
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGAGTGTATCATGTTAGTTTATTGCATAATGGAGCATCTTCTGGTGAACATAGGCGAAATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCGAAGCAAGACCTTTCTTACACTTGATTGAGAAATTGTGCTTAAAGGCATGCCCAACGTTAGAGAAACTTCCTCAAGTAGAGGTGAAGGATGGAATTTTG

mRNA sequence

ATAGAGTGTATCATGTTAGTTTATTGCATAATGGAGCATCTTCTGGTGAACATAGGCGAAATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCGAAGCAAGACCTTTCTTACACTTGATTGAGAAATTGTGCTTAAAGGCATGCCCAACGTTAGAGAAACTTCCTCAAGTAGAGGTGAAGGATGGAATTTTG

Coding sequence (CDS)

ATGTTAGTTTATTGCATAATGGAGCATCTTCTGGTGAACATAGGCGAAATAATAAGCGAGCACATCATAGCTTGGGTTAAGCATCCTCGCGAAGCAAGACCTTTCTTACACTTGATTGAGAAATTGTGCTTAAAGGCATGCCCAACGTTAGAGAAACTTCCTCAAGTAGAGGTGAAGGATGGAATTTTG

Protein sequence

MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKDGIL
Homology
[Close]
BLAST of MELO3C034222 vs. NCBI nr
Match: TYK02827.1 (hypothetical protein E5676_scaffold218G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-20
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +LVYCIMEHLLVNIG+IIS+HIIAWVKHP EAR F+HLIE+LCLKAC +LE+LP VEVKD
Sbjct: 16 VLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYVEVKD 75

Query: 61 GI 63
          G+
Sbjct: 76 GV 77

[Close]
BLAST of MELO3C034222 vs. NCBI nr
Match: KAA0064201.1 (hypothetical protein E6C27_scaffold548G001430 [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-20
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +LVYCIMEHLLVNIG+IIS+HIIAWVKHP EAR F+HLIE+LCLKAC +LE+LP VEVKD
Sbjct: 16 VLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYVEVKD 75

Query: 61 GI 63
          G+
Sbjct: 76 GV 77

[Close]
BLAST of MELO3C034222 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +L+YCIME L VN+GEII EHI AWVKHP+ +RPF HLIEKLCLKACP+LEKLPQVEVKD
Sbjct: 15 VLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKACPSLEKLPQVEVKD 74

Query: 61 GI 63
           +
Sbjct: 75 RV 76

[Close]
BLAST of MELO3C034222 vs. NCBI nr
Match: KAA0054403.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
           M+VYCI+EHLLVNIG+ I EHIIAWVKHPR AR F +LIEKLCL ACP LE+LPQVEVKD
Sbjct: 77  MMVYCIIEHLLVNIGKTIREHIIAWVKHPRGARHFPNLIEKLCLNACPMLEQLPQVEVKD 136

Query: 61  GI 63
           G+
Sbjct: 137 GV 138

[Close]
BLAST of MELO3C034222 vs. NCBI nr
Match: TYJ96830.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
           M+VYCI+EHLLVNIG+ I EHIIAWVKHPR AR F +LIEKLCL ACP LE+LPQVEVKD
Sbjct: 128 MMVYCIIEHLLVNIGKTIREHIIAWVKHPRGARHFPNLIEKLCLNACPMLEQLPQVEVKD 187

Query: 61  GI 63
           G+
Sbjct: 188 GV 189

[Close]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match: A0A5A7VEP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001430 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +LVYCIMEHLLVNIG+IIS+HIIAWVKHP EAR F+HLIE+LCLKAC +LE+LP VEVKD
Sbjct: 16 VLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYVEVKD 75

Query: 61 GI 63
          G+
Sbjct: 76 GV 77

[Close]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match: A0A5D3BTN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00190 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +LVYCIMEHLLVNIG+IIS+HIIAWVKHP EAR F+HLIE+LCLKAC +LE+LP VEVKD
Sbjct: 16 VLVYCIMEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYVEVKD 75

Query: 61 GI 63
          G+
Sbjct: 76 GV 77

[Close]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1  MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
          +L+YCIME L VN+GEII EHI AWVKHP+ +RPF HLIEKLCLKACP+LEKLPQVEVKD
Sbjct: 15 VLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKACPSLEKLPQVEVKD 74

Query: 61 GI 63
           +
Sbjct: 75 RV 76

[Close]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match: A0A5A7UEH4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001500 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
           M+VYCI+EHLLVNIG+ I EHIIAWVKHPR AR F +LIEKLCL ACP LE+LPQVEVKD
Sbjct: 77  MMVYCIIEHLLVNIGKTIREHIIAWVKHPRGARHFPNLIEKLCLNACPMLEQLPQVEVKD 136

Query: 61  GI 63
           G+
Sbjct: 137 GV 138

[Close]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match: A0A5D3BAF4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00250 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MLVYCIMEHLLVNIGEIISEHIIAWVKHPREARPFLHLIEKLCLKACPTLEKLPQVEVKD 60
           M+VYCI+EHLLVNIG+ I EHIIAWVKHPR AR F +LIEKLCL ACP LE+LPQVEVKD
Sbjct: 128 MMVYCIIEHLLVNIGKTIREHIIAWVKHPRGARHFPNLIEKLCLNACPMLEQLPQVEVKD 187

Query: 61  GI 63
           G+
Sbjct: 188 GV 189

The following BLAST results are available for this feature:
BLAST of MELO3C034222 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02827.12.6e-2080.65hypothetical protein E5676_scaffold218G00190 [Cucumis melo var. makuwa][more]
KAA0064201.12.6e-2080.65hypothetical protein E6C27_scaffold548G001430 [Cucumis melo var. makuwa][more]
KAA0032726.12.2e-1977.42drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v... [more]
KAA0054403.13.7e-1979.03drebrin-like [Cucumis melo var. makuwa][more]
TYJ96830.13.7e-1979.03drebrin-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C034222 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VEP31.2e-2080.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BTN11.2e-2080.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRQ11.1e-1977.42Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P... [more]
A0A5A7UEH41.8e-1979.03Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001500 P... [more]
A0A5D3BAF41.8e-1979.03Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00250 ... [more]
BLAST of MELO3C034222 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034222.1MELO3C034222.1mRNA