MELO3C034218 (gene) Melon (DHL92) v4

Overview
NameMELO3C034218
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTSA1-like protein
Locationchr01: 8000614 .. 8000819 (-)
RNA-Seq ExpressionMELO3C034218
SyntenyMELO3C034218
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTTCTCCAAAGTAAATACGAGTTTCTGAGGCTTAAAAATCTTACTCATAAATCCATGGTCGACCAAGACAACATTGAGGTTGATCCTAAAGGATTTAGGAAGTGGAAGGAAACAATCGAGGAGTCAAAGGAGATGGAGAGTGAGATTCAACAACTCAAGAAATTATA

mRNA sequence

ATGAGGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTTCTCCAAAGTAAATACGAGTTTCTGAGGCTTAAAAATCTTACTCATAAATCCATGGTCGACCAAGACAACATTGAGGTTGATCGAGGAGTCAAAGGAGATGGAGAGTGAGATTCAACAACTCAAGAAATTATA

Coding sequence (CDS)

ATGAGGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTTCTCCAAAGTAAATACGAGTTTCTGAGGCTTAAAAATCTTACTCATAAATCCATGGTCGACCAAGACAACATTGAGGTTGATCGAGGAGTCAAAGGAGATGGAGAGTGA

Protein sequence

MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVDRGVKGDGE
Homology
BLAST of MELO3C034218 vs. NCBI nr
Match: KAA0059517.1 (TSA1-like protein [Cucumis melo var. makuwa] >TYK14100.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 2.0e-12
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 53

BLAST of MELO3C034218 vs. NCBI nr
Match: XP_031739615.1 (TSA1-like protein [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTHKSMV+QD +EVD
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

BLAST of MELO3C034218 vs. NCBI nr
Match: KAE8649201.1 (hypothetical protein Csa_014777 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTHKSMV+QD +EVD
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

BLAST of MELO3C034218 vs. NCBI nr
Match: KAA0048522.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTH SMVDQD IEVD
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C034218 vs. NCBI nr
Match: TYK28313.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTH SMVDQD IEVD
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C034218 vs. ExPASy TrEMBL
Match: A0A5A7UY16 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00150 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.7e-13
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 53

BLAST of MELO3C034218 vs. ExPASy TrEMBL
Match: A0A0A0KYB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-10
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTHKSMV+QD +EVD
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 92

BLAST of MELO3C034218 vs. ExPASy TrEMBL
Match: A0A5D3DX93 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001380 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTH SMVDQD IEVD
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C034218 vs. ExPASy TrEMBL
Match: A0A5A7TYB0 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001430 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 42
          MRKEIESKNKEYE LQSKYEFLRL NLTH SMVDQD IEVD
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C034218 vs. ExPASy TrEMBL
Match: A0A5A7TUZ5 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00230 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 1  MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVDR 43
          MRKEIESKNKEYE LQSKYEFLRL +LTH SMVD+D IEVDR
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDR 42

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0059517.12.0e-12100.00TSA1-like protein [Cucumis melo var. makuwa] >TYK14100.1 TSA1-like protein [Cucu... [more]
XP_031739615.19.3e-1087.80TSA1-like protein [Cucumis sativus][more]
KAE8649201.19.3e-1087.80hypothetical protein Csa_014777 [Cucumis sativus][more]
KAA0048522.11.2e-0990.24TSA1-like protein [Cucumis melo var. makuwa][more]
TYK28313.11.2e-0990.24TSA1-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UY169.7e-13100.00TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0... [more]
A0A0A0KYB94.5e-1087.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
A0A5D3DX935.9e-1090.24TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5A7TYB05.9e-1090.24TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001... [more]
A0A5A7TUZ51.3e-0985.71TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034218.1MELO3C034218.1mRNA