MELO3C034196 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034196
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein FAR1-RELATED SEQUENCE 4
Location	chr07: 12565036 .. 12566014 (+)
RNA-Seq Expression	MELO3C034196
Synteny	MELO3C034196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTGAATATATGTTGTTCTGTTTCCAATGATAAAGTTATAAGAGACATCTCTTATTATTAAAGGAAAAAAGTTCATTTGAAAGTAAAGAAGTGCTTTCAAAGTATTTTGGCATAATAACAGTGAATACCAACTTTCAATTTAGGACTATAACATCAAATTTGAGGTCTTTTGAATTTAGCTATAAGCAAGAATGTTGTAAATGGTATGTTATTATAAGAAGAGTGATTTGTGGATGCCATGAAGATACACTTCTGGTCACGGTTGCAATGAAAATACACTTCTGGTCACGATTGTTCATTGAGGACTGTCCAAAGTTCTCACATGCAAGCTTCTTCAACAGTAATTGGTAGTTATTTGATAGATAATTTTAGATTCATGTCTCCTTATTGTTCCATTCCTAAAGAGGTTGTGCATAAGGCTCGTATAAATCTTTGAGTTAATATAAGTTACTAACAAGCTTGAAGGGCGGAAGAACATATGGTAAAAATATTACAAGGTGACACAGTTGAATCATATGCATTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAATCCAGAAATGATCAGTTTATATATCAAATTTAAATTCATTTGTAGATAGATGTGGATAGACTAATATCGTAGTCTATATAAGTAGACAAATATTAGCATTTATCACATTCGTTTTGTTCTTTTTTGTTTGTGCTGATAGAAATGTGTTTGTAATTATTATAGGTACATGCACTGCTTTAGAAATGGATGATAGTTGTCATTTCAAGTTTTGTTTTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATAATTTATGTTGATAGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGCCTCATCACAAGATGGTAACAATCAAATCTTTCCTCTTGCTTTTGCCATTGTAGATTATGAAAATGATGTATAATGAACATGGTTTTTTGAGAAGATA

mRNA sequence

ATGTCACTGAATATATGTTGTTCTGTTTCCAATGATAAAGTTATAAGAGACATCTCTTATTATTAAAGGAAAAAAGTTCATTTGAAAGTAAAGAAGTGCTTTCAAAGTATTTTGGCATAATAACAGTGAATACCAACTTTCAATTTAGGACTATAACATCAAATTTGAGGTCTTTTGAATTTAGCTATAAGCAAGAATGTTGTAAATGGTATGTTATTATAAGAAGAGTGATTTGTGGATGCCATGAAGATACACTTCTGGTCACGATTGTTCATTGAGGACTGTCCAAAGTTCTCACATATTCATGTCTCCTTATTGTTCCATTCCTAAAGAGGTTGTGCATAAGGCTCGTATAAATCTTTGAGTTAATATAAGTTACTAACAAGCTTGAAGGGCGGAAGAACATATGGTAAAAATATTACAAGGTGACACAGTTGAATCATATGCATTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAATCCAGGTACATGCACTGCTTTAGAAATGGATGATAGTTGTCATTTCAAGTTTTGTTTTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATAATTTATGTTGATAGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGCCTCATCACAAGATGGTAACAATCAAATCTTTCCTCTTGCTTTTGCCATTGTAGATTATGAAAATGATGTATAATGAACATGGTTTTTTGAGAAGATA

Coding sequence (CDS)

ATGGTAAAAATATTACAAGGTGACACAGTTGAATCATATGCATTGATTCCAAGCTTCTTTGATAAATTGGTTGAATCTAATCCAGGTACATGCACTGCTTTAGAAATGGATGATAGTTGTCATTTCAAGTTTTGTTTTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATAATTTATGTTGATAGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGCCTCATCACAAGATGGTAACAATCAAATCTTTCCTCTTGCTTTTGCCATTGTAGATTATGAAAATGATGTATAA

Protein sequence

MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCRPIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYENDV

Homology

[Close]

BLAST of MELO3C034196 vs. NCBI nr
Match: TYK02872.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALIP FFDKLVESNPGTCTALEMDDS HFKFCFM FGASIEGWKYC+
Sbjct: 53  MVKILHGDTVESYALIPRFFDKLVESNPGTCTALEMDDSGHFKFCFMAFGASIEGWKYCK 112

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYENDV 105
           PIIYVD  FLKCKFGGILLTASSQDGNNQIFPLAF IVD +NDV
Sbjct: 113 PIIYVDGKFLKCKFGGILLTASSQDGNNQIFPLAFTIVDSKNDV 156

[Close]

BLAST of MELO3C034196 vs. NCBI nr
Match: KAA0056385.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK29133.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 93/102 (91.18%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALIP FFDKLVESNPGTC ALEMDDSCHFKFCFM FG SIEGWKYCR
Sbjct: 1   MVKILHGDTVESYALIPRFFDKLVESNPGTCAALEMDDSCHFKFCFMAFGPSIEGWKYCR 60

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEN 103
           PII VD TFLKCKFGGILL ASSQDGNNQIFPLAFAIVD+EN
Sbjct: 61  PIISVDGTFLKCKFGGILLRASSQDGNNQIFPLAFAIVDFEN 102

[Close]

BLAST of MELO3C034196 vs. NCBI nr
Match: KAA0047748.1 (uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa] >TYK02382.1 uncharacterized protein E5676_scaffold155G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.1e-47
Identity = 94/103 (91.26%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVE YALIP FFDKLVESNPGTCTALEMDD+ HFKFCFM FGASIEGWKYCR
Sbjct: 169 MVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCR 228

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VDRTFLKCKFGGI LTASSQDGNNQIFPLAFAIVD END
Sbjct: 229 PIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSEND 271

[Close]

BLAST of MELO3C034196 vs. NCBI nr
Match: TYK01612.1 (uncharacterized protein E5676_scaffold451G002110 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 92/103 (89.32%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL  DTVESY LIP FFDKLVESNPGTCTALEMDD+ HFKFCFM FGASIEGWKYCR
Sbjct: 40  MVKILHNDTVESYVLIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMAFGASIEGWKYCR 99

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VD TFLKCKFGGILLT SSQDGNNQIFPLAFAIVD END
Sbjct: 100 PIISVDETFLKCKFGGILLTTSSQDGNNQIFPLAFAIVDSEND 142

[Close]

BLAST of MELO3C034196 vs. NCBI nr
Match: KAA0040149.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 5.0e-45
Identity = 92/103 (89.32%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALI  FFDKLVESNPGTC ALEMDDS HFKFCFM FGASIEGWKYCR
Sbjct: 1   MVKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCR 60

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VD TFLKCKFGGI LTASSQD NNQIFPLAFAIVD END
Sbjct: 61  PIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSEND 103

[Close]

BLAST of MELO3C034196 vs. ExPASy TrEMBL
Match: A0A5A7US35 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002770 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.0e-48
Identity = 93/102 (91.18%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALIP FFDKLVESNPGTC ALEMDDSCHFKFCFM FG SIEGWKYCR
Sbjct: 1   MVKILHGDTVESYALIPRFFDKLVESNPGTCAALEMDDSCHFKFCFMAFGPSIEGWKYCR 60

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEN 103
           PII VD TFLKCKFGGILL ASSQDGNNQIFPLAFAIVD+EN
Sbjct: 61  PIISVDGTFLKCKFGGILLRASSQDGNNQIFPLAFAIVDFEN 102

[Close]

BLAST of MELO3C034196 vs. ExPASy TrEMBL
Match: A0A5D3BVN2 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00010 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.0e-48
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALIP FFDKLVESNPGTCTALEMDDS HFKFCFM FGASIEGWKYC+
Sbjct: 53  MVKILHGDTVESYALIPRFFDKLVESNPGTCTALEMDDSGHFKFCFMAFGASIEGWKYCK 112

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYENDV 105
           PIIYVD  FLKCKFGGILLTASSQDGNNQIFPLAF IVD +NDV
Sbjct: 113 PIIYVDGKFLKCKFGGILLTASSQDGNNQIFPLAFTIVDSKNDV 156

[Close]

BLAST of MELO3C034196 vs. ExPASy TrEMBL
Match: A0A5D3BUA2 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00850 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 94/103 (91.26%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVE YALIP FFDKLVESNPGTCTALEMDD+ HFKFCFM FGASIEGWKYCR
Sbjct: 169 MVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCR 228

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VDRTFLKCKFGGI LTASSQDGNNQIFPLAFAIVD END
Sbjct: 229 PIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSEND 271

[Close]

BLAST of MELO3C034196 vs. ExPASy TrEMBL
Match: A0A5D3BS45 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002110 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.5e-47
Identity = 92/103 (89.32%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL  DTVESY LIP FFDKLVESNPGTCTALEMDD+ HFKFCFM FGASIEGWKYCR
Sbjct: 40  MVKILHNDTVESYVLIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMAFGASIEGWKYCR 99

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VD TFLKCKFGGILLT SSQDGNNQIFPLAFAIVD END
Sbjct: 100 PIISVDETFLKCKFGGILLTTSSQDGNNQIFPLAFAIVDSEND 142

[Close]

BLAST of MELO3C034196 vs. ExPASy TrEMBL
Match: A0A5D3CTS7 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold461G00040 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 92/103 (89.32%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCHFKFCFMTFGASIEGWKYCR 60
           MVKIL GDTVESYALI  FFDKLVESNPGTC ALEMDDS HFKFCFM FGASIEGWKYCR
Sbjct: 105 MVKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCR 164

Query: 61  PIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAIVDYEND 104
           PII VD TFLKCKFGGI LTASSQD NNQIFPLAFAIVD END
Sbjct: 165 PIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSEND 207

[Close]

BLAST of MELO3C034196 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 2   VKILQGDTVESYALIPSFFDKLVESNPGTCTALEMDDSCH------FKFCFMTFGASIEG 61
           +K   GD  +S+ LIP     L  SN G     + D   H      F+  F  F  SI+G
Sbjct: 316 IKRFFGDWDQSFRLIPKLMSVLHSSN-GLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQG 375

Query: 62  WKYCRPIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAI 98
           +++CRP+I VD   L  K+   L+ AS+ D  NQ FPLAFA+
Sbjct: 376 FQHCRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAV 416

[Close]

BLAST of MELO3C034196 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10
Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 1   MVKILQGDTVESYALIPSFFDKLVESNPGTCTALEMD-----DSCHFKFCFMTFGASIEG 60
           ++K + GD  +S+ ++P        SN G     + D     D   F+  F +F  SIEG
Sbjct: 313 VIKRVFGDEDQSFRVMPKLISAFHSSN-GLLVDWQYDLFPNPDFASFRGVFWSFSQSIEG 372

Query: 61  WKYCRPIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAI 98
           +++CRP+I VD   L  K+   L+ AS  D  N+ FPLAFA+
Sbjct: 373 FQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAV 413

[Close]

BLAST of MELO3C034196 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 2   VKILQGDTVESYALIPSFFDKLVESNPGTCTALEMD---DSCHFKFC--FMTFGASIEGW 61
           +K + GD  +S+   P     L  SN G     + D   +     FC  F  F  SIEG+
Sbjct: 321 IKRVFGDWDQSFEDFPKLMSALCSSN-GLLVDWKYDLFPNPNFASFCGVFWAFPQSIEGF 380

Query: 62  KYCRPIIYVDRTFLKCKFGGILLTASSQDGNNQIFPLAFAI 98
           ++CRP+I VD   L C++   L+ AS  D  N+ FPLAFA+
Sbjct: 381 QHCRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAV 420

The following BLAST results are available for this feature:

BLAST of MELO3C034196 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02872.1	8.2e-48	90.38	protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]	[more]
KAA0056385.1	8.2e-48	91.18	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK29133.1 prot...	[more]
KAA0047748.1	3.1e-47	91.26	uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa] >TYK...	[more]
TYK01612.1	1.6e-46	89.32	uncharacterized protein E5676_scaffold451G002110 [Cucumis melo var. makuwa]	[more]
KAA0040149.1	5.0e-45	89.32	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034196 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US35	4.0e-48	91.18	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BVN2	4.0e-48	90.38	Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BUA2	1.5e-47	91.26	MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BS45	7.5e-47	89.32	MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3CTS7	2.4e-45	89.32	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MELO3C034196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49920.1	2.3e-11	38.24	MuDR family transposase	[more]
AT1G64260.1	1.1e-10	35.29	MuDR family transposase	[more]
AT1G64255.1	1.2e-09	36.63	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 5..103
None	No IPR available	PANTHER	PTHR31973:SF153	FAMILY TRANSPOSASE, PUTATIVE ISOFORM 1-RELATED	coord: 5..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034196.1	MELO3C034196.1	mRNA