MELO3C034121.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034121.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr10: 8717031 .. 8717447 (-)
RNA-Seq ExpressionMELO3C034121.jh1
SyntenyMELO3C034121.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACGATCTACCTATTGTACCTCCATCAGTTCATAGGGGACATGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAACATGGAAGAAGTGCCTCCTATGTAACAGACATAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATGCCAATATTTGGAGTAGGATATTGTGATTCTAAGATTGGTACATGATATTATGATTCATGGGTTAGTCCATCATCTTCATACATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAAGAGTATAATGAATATCTGTATTATGAAGCACATGTAAAGTATCAAATTGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAACCA

mRNA sequence

ATGTCACGATCTACCTATTGTACCTCCATCAGTTCATAGGGGACATGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAACATGGAAGAAGTGCCTCCTATGTAACAGACATAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATGCCAATATTTGGAGTAGGATATTGTGATTCTAAGATTGGTACATGATATTATGATTCATGGGTTAGTCCATCATCTTCATACATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAAGAGTATAATGAATATCTGTATTATGAAGCACATGTAAAGTATCAAATTGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAACCA

Coding sequence (CDS)

ATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAAGAGTATAATGAATATCTGTATTATGAAGCACATGTAAAGTATCAAATTGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAAC

Protein sequence

MDVDLSTSYMHGHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN
Homology
BLAST of MELO3C034121.jh1 vs. NCBI nr
Match: KAA0054649.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK08613.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 1.41e-20
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVD 56
           +D D +TSYMHGH  G+ E+NEYLYYEA  +YQIDK TN NQRTKR+QNNIEFRVD
Sbjct: 45  IDADSTTSYMHGHEHGHREHNEYLYYEALRRYQIDKSTNNNQRTKRSQNNIEFRVD 100

BLAST of MELO3C034121.jh1 vs. NCBI nr
Match: KAA0032526.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.02e-09
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 1   MDVDLSTSYMH-GHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 59
           MDV LSTSYMH GH+RG+ E+NEYL Y+A +   +       Q +KR+QNNI FRVD DN
Sbjct: 89  MDVGLSTSYMHIGHKRGHGEHNEYLCYKAPI--DVSDRQEYQQESKRSQNNIGFRVDDDN 146

BLAST of MELO3C034121.jh1 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 2.74e-09
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 59
           MDV  S SYMHGH R           +    YQIDK TNKNQRTKR +NNIEFRV+ DN
Sbjct: 337 MDVGPSNSYMHGHGRALGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVNVDN 395

BLAST of MELO3C034121.jh1 vs. NCBI nr
Match: KAA0032200.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 6.20e-08
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEA 28
           MDVDLSTSYMHGH RGYEE+NEYLY+EA
Sbjct: 306 MDVDLSTSYMHGHERGYEEHNEYLYHEA 333

BLAST of MELO3C034121.jh1 vs. NCBI nr
Match: TYK22189.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 2.42e-07
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEA 28
           MDVD STSYMHGH RGYEE+NEYLY+EA
Sbjct: 119 MDVDPSTSYMHGHERGYEEHNEYLYHEA 146

BLAST of MELO3C034121.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C9Q5 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00420 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.82e-21
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVD 56
           +D D +TSYMHGH  G+ E+NEYLYYEA  +YQIDK TN NQRTKR+QNNIEFRVD
Sbjct: 45  IDADSTTSYMHGHEHGHREHNEYLYYEALRRYQIDKSTNNNQRTKRSQNNIEFRVD 100

BLAST of MELO3C034121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SR70 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00370 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.94e-10
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 1   MDVDLSTSYMH-GHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 59
           MDV LSTSYMH GH+RG+ E+NEYL Y+A +   +       Q +KR+QNNI FRVD DN
Sbjct: 89  MDVGLSTSYMHIGHKRGHGEHNEYLCYKAPI--DVSDRQEYQQESKRSQNNIGFRVDDDN 146

BLAST of MELO3C034121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.33e-09
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAHVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 59
           MDV  S SYMHGH R           +    YQIDK TNKNQRTKR +NNIEFRV+ DN
Sbjct: 337 MDVGPSNSYMHGHGRALGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVNVDN 395

BLAST of MELO3C034121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SN49 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00110 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.00e-08
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEA 28
           MDVDLSTSYMHGH RGYEE+NEYLY+EA
Sbjct: 306 MDVDLSTSYMHGHERGYEEHNEYLYHEA 333

BLAST of MELO3C034121.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DFZ9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00610 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.17e-07
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEA 28
           MDVD STSYMHGH RGYEE+NEYLY+EA
Sbjct: 119 MDVDPSTSYMHGHERGYEEHNEYLYHEA 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054649.11.41e-2073.21GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0032526.11.02e-0956.67GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0041168.12.74e-0957.63serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0032200.16.20e-0889.29serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK22189.12.42e-0785.71GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C9Q56.82e-2173.21GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7SR704.94e-1056.67GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7TDY51.33e-0957.63Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7SN493.00e-0889.29Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3DFZ91.17e-0785.71GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034121.jh1.t1MELO3C034121.jh1.t1mRNA