MELO3C034121 (gene) Melon (DHL92) v4

Overview
NameMELO3C034121
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr10: 8701006 .. 8701422 (-)
RNA-Seq ExpressionMELO3C034121
SyntenyMELO3C034121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACGATCTACCTATTGTACCTCCATCAGTTCATAGGGGACATGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAACATGGAAGAAGTGCCTCCTATGTAACAGACATAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATGCCAATATTTGGAGTAGGATATTGTGATTCTAAGATTGGTACATGATATTATGATTCATGGGTTAGTCCATCATCTTCATACATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAGGAGTATAATGAATATCTGTATTATGAAGCACCTGTAAAGTATCAAATCGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAACCA

mRNA sequence

ATGTCACGATCTACCTATTGTACCTCCATCAGTTCATAGGGGACATGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAACATGGAAGAAGTGCCTCCTATGTAACAGACATAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATGCCAATATTTGGAGTAGGATATTGTGATTCTAAGATTGGTACATGATATTATGATTCATGGGTTAGTCCATCATCTTCATACATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAGGAGTATAATGAATATCTGTATTATGAAGCACCTGTAAAGTATCAAATCGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAACCA

Coding sequence (CDS)

ATGGATGTCGATCTATCAACTTCTTACATGCATGGACACAGACGTGGCTACGAGGAGTATAATGAATATCTGTATTATGAAGCACCTGTAAAGTATCAAATCGACAAGTGTACCAACAAGAACCAGAGAACCAAGAGGAACCAGAACAACATAGAGTTCAGGGTTGATGGTGACAAC

Protein sequence

MDVDLSTSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN
Homology
BLAST of MELO3C034121 vs. NCBI nr
Match: KAA0054649.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK08613.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVD 57
           +D D +TSYMHGH  G+ E+NEYLYYEA  +YQIDK TN NQRTKR+QNNIEFRVD
Sbjct: 45  IDADSTTSYMHGHEHGHREHNEYLYYEALRRYQIDKSTNNNQRTKRSQNNIEFRVD 100

BLAST of MELO3C034121 vs. NCBI nr
Match: KAA0032526.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-07
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 1   MDVDLSTSYMH-GHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 60
           MDV LSTSYMH GH+RG+ E+NEYL Y+AP+   +       Q +KR+QNNI FRVD DN
Sbjct: 89  MDVGLSTSYMHIGHKRGHGEHNEYLCYKAPI--DVSDRQEYQQESKRSQNNIGFRVDDDN 146

BLAST of MELO3C034121 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 60
           MDV  S SYMHGH R           +    YQIDK TNKNQRTKR +NNIEFRV+ DN
Sbjct: 337 MDVGPSNSYMHGHGRALGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVNVDN 395

BLAST of MELO3C034121 vs. NCBI nr
Match: KAA0032200.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAP 30
           MDVDLSTSYMHGH RGYEE+NEYLY+EAP
Sbjct: 306 MDVDLSTSYMHGHERGYEEHNEYLYHEAP 334

BLAST of MELO3C034121 vs. NCBI nr
Match: TYK22189.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-05
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAP 30
           MDVD STSYMHGH RGYEE+NEYLY+EAP
Sbjct: 119 MDVDPSTSYMHGHERGYEEHNEYLYHEAP 147

BLAST of MELO3C034121 vs. ExPASy TrEMBL
Match: A0A5D3C9Q5 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00420 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-15
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVD 57
           +D D +TSYMHGH  G+ E+NEYLYYEA  +YQIDK TN NQRTKR+QNNIEFRVD
Sbjct: 45  IDADSTTSYMHGHEHGHREHNEYLYYEALRRYQIDKSTNNNQRTKRSQNNIEFRVD 100

BLAST of MELO3C034121 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 60
           MDV  S SYMHGH R           +    YQIDK TNKNQRTKR +NNIEFRV+ DN
Sbjct: 337 MDVGPSNSYMHGHGRALGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVNVDN 395

BLAST of MELO3C034121 vs. ExPASy TrEMBL
Match: A0A5A7SN49 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00110 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAP 30
           MDVDLSTSYMHGH RGYEE+NEYLY+EAP
Sbjct: 306 MDVDLSTSYMHGHERGYEEHNEYLYHEAP 334

BLAST of MELO3C034121 vs. ExPASy TrEMBL
Match: A0A5D3DFZ9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00610 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 1   MDVDLSTSYMHGHRRGYEEYNEYLYYEAP 30
           MDVD STSYMHGH RGYEE+NEYLY+EAP
Sbjct: 119 MDVDPSTSYMHGHERGYEEHNEYLYHEAP 147

BLAST of MELO3C034121 vs. ExPASy TrEMBL
Match: A0A5A7T6Q6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00300 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 6   STSYMHGHRRGYEEYNEYLYYEAPVKYQIDKCTNKNQRTKRNQNNIEFRVDGDN 60
           S+SYMHGH RG  E+NEYLYYE P          + Q  +R  NN EFRVD DN
Sbjct: 444 SSSYMHGHGRGRGEHNEYLYYEVPTTVPKQSDEQQQQEIRRKYNNKEFRVDDDN 497

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054649.12.0e-1473.21GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0032526.13.1e-0758.33GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0041168.11.2e-0657.63serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0032200.13.4e-0689.66serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK22189.12.2e-0586.21GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C9Q59.6e-1573.21GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7TDY55.6e-0757.63Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7SN491.6e-0689.66Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3DFZ91.1e-0586.21GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7T6Q62.4e-0553.70Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034121.1MELO3C034121.1mRNA