MELO3C034112.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034112.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGirdin-like
Locationchr10: 8352976 .. 8354248 (+)
RNA-Seq ExpressionMELO3C034112.jh1
SyntenyMELO3C034112.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGGTACGACAGTTTGGGATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCTTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAAAAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTCATATGATCTTGAAGATTTTCAAGAAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGAAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTAAGGGGGGTAATTGAAGGGGTAAAAGAGACAAGCTTTGAACAACCAAATCAGTGGGTAGAGAATAGCATAGAATTAGAAAAGAAAAATCGACTGCTATAGCAAAAAGACAAGAAACTTCGTAAAGATACAAATCAATGGATGGATCATGCAACCTATTTGCAGAAAGAACTTGAAAAGACGAAGAGTTTCTTAAGAAATCAAAGTTAGTTAGAAAATGTTCTTGAGGCGTTAGATAAGGAGATGAGACGATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTAGAAGATGGGAAGCACAGATACTAGATTTTGAAGCACACAATCATTCTCTGTGTCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTGTATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGACGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAATGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTGATCTGAGGATTAATTTTTTCTTAATGCAACCTCATGCAGATGATCTGAATAGATTCTTGAATATGATATGTAGATAACTTAGGCAATTTGATCGTTTTCATTAATTGATCGTTTTACTATTAATGACAATAGGTTCATTACATTTTGTTTGCTTCTTGTTTTAGTTTGTCAAGTTTACATT

mRNA sequence

TTTGGTACGACAGTTTGGGATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCTTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAAAAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTCATATGATCTTGAAGATTTTCAAGAAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGAAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTAAGGGGGGTAATTGAAGGGGTAAAAGAGACAAGCTTTGAACAACCAAATCAGTGGGTAGAGAATAGCATAGAATTAGAAAAGAAAAATCGACTGCTATAGCAAAAAGACAAGAAACTTCGTAAAGATACAAATCAATGGATGGATCATGCAACCTATTTGCAGAAAGAACTTGAAAAGACGAAGAGTTTCTTAAGAAATCAAAGTTAGTTAGAAAATGTTCTTGAGGCGTTAGATAAGGAGATGAGACGATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTAGAAGATGGGAAGCACAGATACTAGATTTTGAAGCACACAATCATTCTCTGTGTCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTGTATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGACGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAATGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTGATCTGAGGATTAATTTTTTCTTAATGCAACCTCATGCAGATGATCTGAATAGATTCTTGAATATGATATGTAGATAACTTAGGCAATTTGATCGTTTTCATTAATTGATCGTTTTACTATTAATGACAATAGGTTCATTACATTTTGTTTGCTTCTTGTTTTAGTTTGTCAAGTTTACATT

Coding sequence (CDS)

ATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTAGAAGATGGGAAGCACAGATACTAGATTTTGAAGCACACAATCATTCTCTGTGTCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTGTATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGACGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAATGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTGATCTGA

Protein sequence

MNKANRSLKNLESGKEYFLELVNDLNTSIRRWEAQILDFEAHNHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQMKVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNWQLI
Homology
[Close]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match: TYK23632.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (513), Expect = 1.59e-61
Identity = 108/158 (68.35%), Postives = 120/158 (75.95%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANR LKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 132 MNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 191

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAERSEEYEILKNYVDSLHYQLT  QNS++RI QEYESL TDYVQM
Sbjct: 192 NHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 251

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 252 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289

[Close]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match: TYK18656.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (514), Expect = 4.16e-61
Identity = 108/158 (68.35%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 180 MNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 239

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++++H+KMAERSEEYEILKNYVDSLHYQLT  QNS++RI QEYESL TDYVQM
Sbjct: 240 NHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 299

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 300 KVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337

[Close]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match: KAA0037780.1 (girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 1.61e-60
Identity = 107/158 (67.72%), Postives = 120/158 (75.95%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 139 MNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDLEAQ 198

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+I+++H+KMAERSEEYEILKNY DSLH+QLT  QNS++RI QEYESL TDYVQM
Sbjct: 199 NHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDYVQM 258

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 259 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296

[Close]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match: KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (499), Expect = 3.85e-59
Identity = 106/158 (67.09%), Postives = 118/158 (74.68%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLE VNDLNTSI + E QI+D EA 
Sbjct: 155 MNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 214

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNYV+SLHYQLT  QNS+ RI QEYESL TDYVQM
Sbjct: 215 NHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQM 274

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 275 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312

[Close]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match: KAA0060422.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 190 bits (483), Expect = 3.44e-58
Identity = 103/158 (65.19%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           M+KANRSLKN                  LE+GKEYFLE VNDLNTSI + E QI+D EA 
Sbjct: 38  MDKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 97

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNY DSLHYQLT  QNS+ RI QEYESL  DYVQM
Sbjct: 98  NHSLRQTVDSLHLKMAECSEEYEILKNYADSLHYQLTALQNSSRRITQEYESLNIDYVQM 157

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD++ RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 158 KVDYDMETRDFQVLVERVDQTIEFLRMVSKRANGFVEW 195

[Close]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 7.68e-62
Identity = 108/158 (68.35%), Postives = 120/158 (75.95%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANR LKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 132 MNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 191

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAERSEEYEILKNYVDSLHYQLT  QNS++RI QEYESL TDYVQM
Sbjct: 192 NHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 251

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 252 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289

[Close]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.01e-61
Identity = 108/158 (68.35%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 180 MNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 239

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++++H+KMAERSEEYEILKNYVDSLHYQLT  QNS++RI QEYESL TDYVQM
Sbjct: 240 NHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 299

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 300 KVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337

[Close]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DUG2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 7.81e-61
Identity = 107/158 (67.72%), Postives = 120/158 (75.95%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLNTSI + E QI+D EA 
Sbjct: 139 MNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDLEAQ 198

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+I+++H+KMAERSEEYEILKNY DSLH+QLT  QNS++RI QEYESL TDYVQM
Sbjct: 199 NHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDYVQM 258

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 259 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296

[Close]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 1.86e-59
Identity = 106/158 (67.09%), Postives = 118/158 (74.68%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           MNKANRSLKN                  LE+GKEYFLE VNDLNTSI + E QI+D EA 
Sbjct: 155 MNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 214

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNYV+SLHYQLT  QNS+ RI QEYESL TDYVQM
Sbjct: 215 NHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQM 274

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD+Q RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 275 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312

[Close]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UX37 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002410 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 1.66e-58
Identity = 103/158 (65.19%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNTSIRRWEAQILDFEAH 60
           M+KANRSLKN                  LE+GKEYFLE VNDLNTSI + E QI+D EA 
Sbjct: 38  MDKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 97

Query: 61  NHSLCQSINSIHVKMAERSEEYEILKNYVDSLHYQLTVFQNSNERIVQEYESLKTDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNY DSLHYQLT  QNS+ RI QEYESL  DYVQM
Sbjct: 98  NHSLRQTVDSLHLKMAECSEEYEILKNYADSLHYQLTALQNSSRRITQEYESLNIDYVQM 157

Query: 121 KVYYDIQMRDFQVLMEHVDQMIEFLRMTSIRANGLQNW 140
           KV YD++ RDFQVL+E VDQ IEFLRM S RANG   W
Sbjct: 158 KVDYDMETRDFQVLVERVDQTIEFLRMVSKRANGFVEW 195

The following BLAST results are available for this feature:
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23632.11.59e-6168.35girdin-like [Cucumis melo var. makuwa][more]
TYK18656.14.16e-6168.35girdin-like [Cucumis melo var. makuwa][more]
KAA0037780.11.61e-6067.72girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var... [more]
KAA0062685.13.85e-5967.09girdin-like [Cucumis melo var. makuwa][more]
KAA0060422.13.44e-5865.19girdin-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C034112.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DJ957.68e-6268.35Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P... [more]
A0A5D3D5332.01e-6168.35Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE... [more]
A0A5D3DUG27.81e-6167.72Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 P... [more]
A0A5A7V9X61.86e-5967.09Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P... [more]
A0A5A7UX371.66e-5865.19Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002410 PE... [more]
BLAST of MELO3C034112.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034112.jh1.t1MELO3C034112.jh1.t1mRNA