MELO3C034079 (gene) Melon (DHL92) v4

Overview
NameMELO3C034079
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr06: 21088604 .. 21089058 (-)
RNA-Seq ExpressionMELO3C034079
SyntenyMELO3C034079
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATTGTCATTAATACCCTTATATTGACGGTTTAAATGTGTCACCTTTATCTATAACTCGGCATCAATATATTGTCATGTTTAAATATTTTATTACAAATAATTCTTTACAAGAAATGTGATATGCCCAACACGGAGAGTCAGTTAACTTTAGATCAAGGTACAAAAAACTTTGATGAAGGAACTAGTAGTAACCCTTTTGATGAAAGAACTAGTAGTAGACAGTTTTATGAAGAAAATGATATGTTTGGTATGCTGAATGATTTACAAGCCTCGATTTAACAGGAAGAGGAAACAGAGGAATATCGTTTGGAGTATGAAATGTCGAGGAATATTGGGGTAGATATAGATGAAGATAAAACAAACATATTTTAGGACTTATTGAATGAAGCATGTAATGAGTTGTACCCCGACTGTTCTGAATTTTCCTCCTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

ATATATTGTCATTAATACCCTTATATTGACGGTTTAAATGTGTCACCTTTATCTATAACTCGGCATCAATATATTGTCATGTTTAAATATTTTATTACAAATAATTCTTTACAAGAAATGTGATATGCCCAACACGGAGAGTCAGTTAACTTTAGATCAAGGTACAAAAAACTTTGATGAAGGAACTAGTAGTAACCCTTTTGATGAAAGAACTAGTAGTAGACAGTTTTATGAAGAAAATGATATGTTTGGTATGCTGAATGATTTACAAGCCTCGATTTAACAGGAAGAGGAAACAGAGGAATATCGTTTGGAGTATGAAATGTCGAGGAATATTGGGGTAGATATAGATGAAGATAAAACAAACATATTTTAGGACTTATTGAATGAAGCATGTAATGAGTTGTACCCCGACTGTTCTGAATTTTCCTCCTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGCCCAACACGGAGAGTCAGTTAACTTTAGATCAAGGTACAAAAAACTTTGATGAAGGAACTAGTAGTAACCCTTTTGATGAAAGAACTAGTAGTAGACAGTTTTATGAAGAAAATGATATGTTTGGTATGCTGAATGATTTACAAGCCTCGATTTAA

Protein sequence

MPNTESQLTLDQGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI
Homology
BLAST of MELO3C034079 vs. NCBI nr
Match: KAA0063387.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0

Query: 12  QGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           +GTKNF+EGTSSNPFDERTSSRQF EE+DMF M+NDLQA I
Sbjct: 706 RGTKNFEEGTSSNPFDERTSSRQFNEEDDMFSMMNDLQAPI 746

BLAST of MELO3C034079 vs. NCBI nr
Match: TYK11649.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 13  GTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           GTKNF+EGTSSNPFDERTSSRQF EE+DMF M+NDLQA I
Sbjct: 773 GTKNFEEGTSSNPFDERTSSRQFNEEDDMFSMMNDLQAPI 812

BLAST of MELO3C034079 vs. NCBI nr
Match: KAA0067413.1 (putative transposase [Cucumis melo var. makuwa] >TYK26550.1 putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 7   QLTLDQGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           +L   +GT+NF+EGTSSNPF+E TSSRQF EE D+FGMLNDLQASI
Sbjct: 106 ELLSSRGTENFEEGTSSNPFNEGTSSRQFNEEGDIFGMLNDLQASI 151

BLAST of MELO3C034079 vs. NCBI nr
Match: KAA0033988.1 (GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK02557.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0

Query: 15 KNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
          +NFDEGTSSNPFDE  SSRQF+EENDMFGMLNDLQA I
Sbjct: 15 ENFDEGTSSNPFDEGASSRQFHEENDMFGMLNDLQAPI 52

BLAST of MELO3C034079 vs. NCBI nr
Match: KAA0051316.1 (uncharacterized protein E6C27_scaffold55G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 12 QGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
          +GTKNF+EGTSSNPFDE TSSR F EE++MFGMLNDLQA I
Sbjct: 54 RGTKNFEEGTSSNPFDEGTSSRPFNEEDEMFGMLNDLQAPI 94

BLAST of MELO3C034079 vs. ExPASy TrEMBL
Match: A0A5A7V8R2 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold508G00160 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0

Query: 12  QGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           +GTKNF+EGTSSNPFDERTSSRQF EE+DMF M+NDLQA I
Sbjct: 706 RGTKNFEEGTSSNPFDERTSSRQFNEEDDMFSMMNDLQAPI 746

BLAST of MELO3C034079 vs. ExPASy TrEMBL
Match: A0A5D3CN32 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00140 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 13  GTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           GTKNF+EGTSSNPFDERTSSRQF EE+DMF M+NDLQA I
Sbjct: 773 GTKNFEEGTSSNPFDERTSSRQFNEEDDMFSMMNDLQAPI 812

BLAST of MELO3C034079 vs. ExPASy TrEMBL
Match: A0A5A7VH39 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001480 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-09
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 7   QLTLDQGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
           +L   +GT+NF+EGTSSNPF+E TSSRQF EE D+FGMLNDLQASI
Sbjct: 106 ELLSSRGTENFEEGTSSNPFNEGTSSRQFNEEGDIFGMLNDLQASI 151

BLAST of MELO3C034079 vs. ExPASy TrEMBL
Match: A0A5A7STN0 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00080 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.9e-09
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0

Query: 15 KNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
          +NFDEGTSSNPFDE  SSRQF+EENDMFGMLNDLQA I
Sbjct: 15 ENFDEGTSSNPFDEGASSRQFHEENDMFGMLNDLQAPI 52

BLAST of MELO3C034079 vs. ExPASy TrEMBL
Match: A0A5A7UAT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00290 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-08
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 12 QGTKNFDEGTSSNPFDERTSSRQFYEENDMFGMLNDLQASI 53
          +GTKNF+EGTSSNPFDE TSSR F EE++MFGMLNDLQA I
Sbjct: 54 RGTKNFEEGTSSNPFDEGTSSRPFNEEDEMFGMLNDLQAPI 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063387.12.9e-0982.93Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
TYK11649.13.8e-0985.00Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
KAA0067413.11.1e-0873.91putative transposase [Cucumis melo var. makuwa] >TYK26550.1 putative transposase... [more]
KAA0033988.11.4e-0886.84GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK02557.1 GDSL esterase/lipase... [more]
KAA0051316.13.2e-0880.49uncharacterized protein E6C27_scaffold55G00290 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V8R21.4e-0982.93Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3CN321.8e-0985.00Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7VH395.3e-0973.91Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313... [more]
A0A5A7STN06.9e-0986.84GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925... [more]
A0A5A7UAT81.5e-0880.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034079.1MELO3C034079.1mRNA