MELO3C034061.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034061.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGirdin-like
Locationchr10: 5652888 .. 5654116 (-)
RNA-Seq ExpressionMELO3C034061.jh1
SyntenyMELO3C034061.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATATCCTAGGAAGGAGGCTTGGTTGTCTTTCTTTGCAAAACTGACTTCTAAAAATGCTATATGGAAGGCTCAATGGATGCCTTTGAAGGTATAGATGTGGAGATTTTCGCAATGTACCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACTATCGTTAGTTTTGCGTTAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTGCAAGAGTTTGACTTTTCATACGATCTTGAAGATTGTCAAGAAAAAAAACGTCGAGCAGTATGCACATAGAAATCTGTAAGGAAGATAAAAGACAAAGGACATTATGAAAGAGTTACTAGCAGATACGAGGCATGACAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGAGAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATTAGTGGATTCAGAAGAGCATAGAACTAGAAGAGAAAAATTGACTGTTAGAGTAAGAGAATGAAAAACTTCGTAAAGAGACAAGTCAATGCATGGATCATGTGACTTATTGCAGAAAGAACTCGAAAAGACCAAGAGTTTTTTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACATTAAATAAGGAGATGAAGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTATCAATGATTTGAATACATCAATTGGAAACGAGAAACACAAATAATGAATTTGGAAGCACACAATCATTCTTTGCATCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTTTAAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTACATTTCAAAATTCAAGTGAGAGGATAGTGCATGAATACGAGTCATTGAAGACGGATTACATGCAAATGAAGTTTGATTATGATCTACAAATGAGAGATTTCCAAGTGCTGGTGGAACGTGTAGATAAATTTCTTGGAATGGTGTCCAGAAGAGCAAATGGTTTGGCAGAATGGGCAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAACCTCATGCAGATGATCTAGATAGATTCTTGAAGATGATATGTAGAGAACTCAGGTATTTTGGTTGTTTTCATTAATTGTTCATTTTGCTATTGA

mRNA sequence

AACATATCCTAGGAAGGAGGCTTGGTTGTCTTTCTTTGCAAAACTGACTTCTAAAAATGCTATATGGAAGGCTCAATGGATGCCTTTGAAGGTATAGATGTGGAGATTTTCGCAATGTACCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACTATCGTTAGTTTTGCGTTAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTGCAAGAGTTTGACTTTTCATACGATCTTGAAGATTGTCAAGAAAAAAAACGTCGAGCAGTATGCACATAGAAATCTGTAAGGAAGATAAAAGACAAAGGACATTATGAAAGAGTTACTAGCAGATACGAGGCATGACAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGAGAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATTAGTGGATTCAGAAGAGCATAGAACTAGAAGAGAAAAATTGACTGTTAGAGTAAGAGAATGAAAAACTTCGTAAAGAGACAAGTCAATGCATGGATCATGTGACTTATTGCAGAAAGAACTCGAAAAGACCAAGAGTTTTTTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACATTAAATAAGGAGATGAAGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTATCAATGATTTGAATACATCAATTGGAAACGAGAAACACAAATAATGAATTTGGAAGCACACAATCATTCTTTGCATCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTTTAAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTACATTTCAAAATTCAAGTGAGAGGATAGTGCATGAATACGAGTCATTGAAGACGGATTACATGCAAATGAAGTTTGATTATGATCTACAAATGAGAGATTTCCAAGTGCTGGTGGAACGTGTAGATAAATTTCTTGGAATGGTGTCCAGAAGAGCAAATGGTTTGGCAGAATGGGCAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAACCTCATGCAGATGATCTAGATAGATTCTTGAAGATGATATGTAGAGAACTCAGGTATTTTGGTTGTTTTCATTAATTGTTCATTTTGCTATTGA

Coding sequence (CDS)

ATGAATTTGGAAGCACACAATCATTCTTTGCATCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTTTAAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTATCAACTTACTACATTTCAAAATTCAAGTGAGAGGATAGTGCATGAATACGAGTCATTGAAGACGGATTACATGCAAATGAAGTTTGATTATGATCTACAAATGAGAGATTTCCAAGTGCTGGTGGAACGTGTAGATAAATTTCTTGGAATGGTGTCCAGAAGAGCAAATGGTTTGGCAGAATGGGCAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAACCTCATGCAGATGATCTAGATAGATTCTTGAAGATGATATGTAGAGAACTCAGGTATTTTGGTTGTTTTCATTAA

Protein sequence

MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLKTDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLDRFLKMICRELRYFGCFH
Homology
[Close]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match: KAA0034022.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 262 bits (669), Expect = 8.78e-85
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           MNLEAHNHSLHQTVDSLHLKMAERF+EYEILKNYVDSLHYQLTTFQNSSERI+HEYESLK
Sbjct: 1   MNLEAHNHSLHQTVDSLHLKMAERFEEYEILKNYVDSLHYQLTTFQNSSERIMHEYESLK 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD 120
           TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD
Sbjct: 61  TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD 120

Query: 121 RFLKMICRELR 131
           RFLKMICRELR
Sbjct: 121 RFLKMICRELR 131

[Close]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match: TYK23632.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (578), Expect = 1.88e-71
Identity = 115/140 (82.14%), Postives = 124/140 (88.57%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSLHQTVDSLHLKMAER +EYEILKNYVDSLHYQLT  QNSS+RI  EYESL 
Sbjct: 186 MDLEAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLN 245

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AEWAADLRVNFFS+QPHAD
Sbjct: 246 TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHAD 305

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 306 DLNRFLKMICRELGHFGRFH 325

[Close]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match: KAA0036956.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 2.21e-68
Identity = 109/140 (77.86%), Postives = 118/140 (84.29%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA  HSL QTVDSLHLKMAER +EYEILKNY D LHYQLT  QNSS+RI  EYESL 
Sbjct: 1   MDLEAQIHSLRQTVDSLHLKMAERSEEYEILKNYADFLHYQLTALQNSSKRITQEYESLN 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDL  RDFQVLVERVD+   FL MVS+RANG AEW A+LRVNFFSMQPHAD
Sbjct: 61  TDYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWVANLRVNFFSMQPHAD 120

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 121 DLNRFLKMICRELGHFGHFH 140

[Close]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match: TYK04062.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (540), Expect = 3.14e-68
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSL QTVDSLHLKMAE  +EYEILKNY DSLHYQLT  QNSS RI  EYESL 
Sbjct: 1   MDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYADSLHYQLTALQNSSRRITQEYESLN 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AE AADLRVNFFSMQPHAD
Sbjct: 61  TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAECAADLRVNFFSMQPHAD 120

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +F  FH
Sbjct: 121 DLNRFLKMICRELGHFRRFH 140

[Close]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match: KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (557), Expect = 5.48e-68
Identity = 112/140 (80.00%), Postives = 121/140 (86.43%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSL QTVDSLHLKMAE  +EYEILKNYV+SLHYQLT  QNSS RI  EYESL 
Sbjct: 209 MDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLN 268

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AEWAADLRVNFFS+QPHAD
Sbjct: 269 TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHAD 328

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 329 DLNRFLKMICRELGHFGHFH 348

[Close]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SS95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 4.25e-85
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           MNLEAHNHSLHQTVDSLHLKMAERF+EYEILKNYVDSLHYQLTTFQNSSERI+HEYESLK
Sbjct: 1   MNLEAHNHSLHQTVDSLHLKMAERFEEYEILKNYVDSLHYQLTTFQNSSERIMHEYESLK 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD 120
           TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD
Sbjct: 61  TDYMQMKFDYDLQMRDFQVLVERVDKFLGMVSRRANGLAEWAADLRVNFFSMQPHADDLD 120

Query: 121 RFLKMICRELR 131
           RFLKMICRELR
Sbjct: 121 RFLKMICRELR 131

[Close]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 9.11e-72
Identity = 115/140 (82.14%), Postives = 124/140 (88.57%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSLHQTVDSLHLKMAER +EYEILKNYVDSLHYQLT  QNSS+RI  EYESL 
Sbjct: 186 MDLEAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLN 245

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AEWAADLRVNFFS+QPHAD
Sbjct: 246 TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHAD 305

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 306 DLNRFLKMICRELGHFGRFH 325

[Close]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T4A6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00360 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.07e-68
Identity = 109/140 (77.86%), Postives = 118/140 (84.29%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA  HSL QTVDSLHLKMAER +EYEILKNY D LHYQLT  QNSS+RI  EYESL 
Sbjct: 1   MDLEAQIHSLRQTVDSLHLKMAERSEEYEILKNYADFLHYQLTALQNSSKRITQEYESLN 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDL  RDFQVLVERVD+   FL MVS+RANG AEW A+LRVNFFSMQPHAD
Sbjct: 61  TDYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWVANLRVNFFSMQPHAD 120

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 121 DLNRFLKMICRELGHFGHFH 140

[Close]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BYW3 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3019G00040 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.52e-68
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSL QTVDSLHLKMAE  +EYEILKNY DSLHYQLT  QNSS RI  EYESL 
Sbjct: 1   MDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYADSLHYQLTALQNSSRRITQEYESLN 60

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AE AADLRVNFFSMQPHAD
Sbjct: 61  TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAECAADLRVNFFSMQPHAD 120

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +F  FH
Sbjct: 121 DLNRFLKMICRELGHFRRFH 140

[Close]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.65e-68
Identity = 112/140 (80.00%), Postives = 121/140 (86.43%), Query Frame = 0 

Query: 1   MNLEAHNHSLHQTVDSLHLKMAERFKEYEILKNYVDSLHYQLTTFQNSSERIVHEYESLK 60
           M+LEA NHSL QTVDSLHLKMAE  +EYEILKNYV+SLHYQLT  QNSS RI  EYESL 
Sbjct: 209 MDLEAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLN 268

Query: 61  TDYMQMKFDYDLQMRDFQVLVERVDK---FLGMVSRRANGLAEWAADLRVNFFSMQPHAD 120
           TDY+QMK DYDLQ RDFQVLVERVD+   FL MVS+RANG AEWAADLRVNFFS+QPHAD
Sbjct: 269 TDYVQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHAD 328

Query: 121 DLDRFLKMICRELRYFGCFH 137
           DL+RFLKMICREL +FG FH
Sbjct: 329 DLNRFLKMICRELGHFGHFH 348

The following BLAST results are available for this feature:
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0034022.18.78e-8598.47girdin-like [Cucumis melo var. makuwa][more]
TYK23632.11.88e-7182.14girdin-like [Cucumis melo var. makuwa][more]
KAA0036956.12.21e-6877.86girdin-like [Cucumis melo var. makuwa][more]
TYK04062.13.14e-6879.29girdin-like [Cucumis melo var. makuwa][more]
KAA0062685.15.48e-6880.00girdin-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C034061.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SS954.25e-8598.47Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=... [more]
A0A5D3DJ959.11e-7282.14Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P... [more]
A0A5A7T4A61.07e-6877.86Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00360 PE=... [more]
A0A5D3BYW31.52e-6879.29Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3019G00040 P... [more]
A0A5A7V9X62.65e-6880.00Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P... [more]
BLAST of MELO3C034061.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034061.jh1.t1MELO3C034061.jh1.t1mRNA