MELO3C034039.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034039.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 1131967 .. 1136246 (-)
RNA-Seq ExpressionMELO3C034039.jh1
SyntenyMELO3C034039.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAAAAGTATACTATATGCTTAGCCGCCAGGACAGATATTACTACTCCCAAGTCTCTCTGTTATTGTCAATTTATGTAAGATCAAAGGGTGAACATGGCTTGAGCCTTGAAGCACTATAGTTTTTCTCCATCTTCTTTATCAAGTGTACGAATTAATATACTAACATGATGCATCTCATGAAAACTGCCTCTCCCTTGCTTCTGAAGCCTGAGCTTTTGTCTTTTTCAATCAATTAAAATAGGATAAACCAAAATGTTCACAACGCAATTGGTCTGACCATCAAGGTTGTAGAGAACTGGAATATTAACCGAGGTGAAATTCTCACTAGTTTCTTACATAAAATAATTTCAGTTATGTGATTGTAATGCCTGTCAGAAGATTATCTAATTGACGCAATTAAAATACTTCTGTCTATGTACAATACAACGGTCACCCAGAACAAGAAAAAAAAAAAAAAAGACTTTATGAGGTTCTCTCTCTGCACATACAATCATTTACAATCCAAATATTTTGCTTTTTTCTTGACCTTGACAGGAAACGAAAGCTCAACAATGTAACAATGTTATTGTGTCCCAATGGAGACAGCCTTGATATCAGTAAACTCTACAGAGATGAGCAATGGCGGCCAAAACTGCAGCTACCAGAAGCCCCGTATTGTTCTCATAGCCATTTCCTGCATTATGTGGTCGACCTTGGCGGTGACGTGCTTGTGCTGAACCAGCTGCATAAACAGGGATCACGGCTGTACCTCCTCCTGTATGAGGTCTACTGCCACCACCATTTTCTCCACCGCCGGCAGCGGCTGCACCTCCATTTGCACGACGAATCACATTAGAAACGGTGATTGCACTTGCACTGTATCTTCTGCTAATCTGGTTAGTAACCCCATATTTGCCCTGTTTTCTTGTGTAAGTTTTCTGTTGGTAATTAGACTCTGCATAATATAGAATAGAACATGTCAGCAATGGACTCAAACTTTGCTATATTTTCAATTTTTTTTGAAATATTGCTGTACAATGGATTATATTCCTAAAATTGGTATCCATTATAACTATTCTTTTAAAAAGTTAAAGTTCAATTTTATGATATTTTACGAAAATAACCTGTTTTATGAGGTAAAATTCATCCTATTGAAATAAATTTTGTTCAATGTTTTAAAAAAGTAGACCCTATATTTTTCTGTTTTGGAAACTCCTTTTCTTGTACCTCTCTAACCAAGTGGTTTCAAATTACATTGTTTAGTATTAGTGTATATATTCTCTAATTAAAAACAGCGAATAAAAAGTAGGAACAAGAAGAGCTTATTGAAAAACGGGAATAGAAATGGGAATAGGAATAGGACAAGCTTATTGAACAAGTTCCAAAAAAACGCTTTTTTTTTGCAACCAAATATATATGTAACTGGTAAGCATCATGCATCATAAAATAAACGAAAACTTAATCATTTGATCACTTTGTTTTTATTAAAGTATAACCATACAAATAAAAGAAAAAAAGCTAAATTGGAGATTATGAATATTATCTTGACTAATTAGAATAGTTGATTATTTGATCACTTCTGTCAGTACTGATTAGCACCATCTAGACTCTGATTTGATTTAAAATATTATCTCCCAAAAGCTAAAGTTATTGGAAAAGTCTTAAATTGTTATGGGCCTATGGCCCCTCCATTCACTGGATATTAAACTTTATTTTATTTACATATTTATTTTCATTCGAAATTCCGAAGGACATGTTTACCTGCACTCCTCACTAACCTATACTCTTCTATTAATCTTTTATTCTTTTCTTTTTCACATTACTATTTTATTCTGATTTTCAATCATGCAATTTTGTCGTTTATACATCCACACATGTTATCTGGAATGCACACTTTATTTTAGCTTCTTGTCGGTTTCATAATTCAACTTTGTCGTATATACTTTATTACCGATTCTCTTTGTTGCTTGGTTGGCTTAATGGATTTACCTACCTAAACTTCTGAGCTAATGGGTCTCTTATCATGATATCAATATTAGTAGTCATGGGGAATTTTAGTATTATGATGATTCTTTTTTTTTTTTGTAGTAATCCACAAGTTAAAGCTTTTGACATGGACGATTTCGTTGTTTACTTTTTACCTTAACGATTAATTTTCTTTCACGACTTTTAAGAGAAGAGAATAAAGACTTGTACAGTAAATTGATATTGAACTATTCAACTTCTATAGTAAATAATATGAAATTGTCCATTTATCTAGAACCTTTATCTTTTCTTATTTCTCTATTTTCTGCATTTAACAAGAAACTCTACCCTTCAACTATCTTCTATAAGTACTAGTTTTTAACTCTAACATATTAACTCTCAACTTCATAATTAAAGTAAGGCCCCAACCATCCCTTTTAACACAAATGATAGAACTTTTGAGCTTTTTAAGAAAAAATTGTTTAACGAAACTCATCGTTTAATGAAACTGCACTGACATTCTTTTTCTATTGAATATATAGAGAGGTACCTCAAATTTTTATCAGGTTTTAATTATTGAACTTACATCTAACATTTATGTTAGATTATTATGATGCACTGATTTTCTTTGAAGGAATTATTAATTTTTTCGTAAGTGGAGACTAGACTTTCATTAAGAACTAGATACCAAGAAATGATTTCATGTTCAGTCTGATTCAATTTTGAAATTGTGTGGTCCAAAAAAATGAATATACAGAGAAAATTTGTGATAAAACAAGGTGAATTGAATTTCCTCAAGAGATTGGAAAGGATACTGACCTGTTGCTGTTGGGAAGATTTGCTGTTGGAGAGCCGCAGATGAAATGGCCAAGGTAGAACAAAACAGTAAGAAAATCAATCTTATCCCTCTTCTTTCCATTGTTGTAATAGGAATAGCTATCTTCTCTCTATTAGGTAATGCGAAAACGGTCTTCTACTCTGATTTATTTATATAAAACGGGGGGAAGTGGAAGTTCTTAGGTTTTTTCTTCTTCCAATCCACTAAAGCACTCTTATCTCTTTAAGCACACGGACACGTAGAATAATACATACTTTTAAAAAGTATCGAATATTTCTTTCTTTTTTTTTCCTCCTGAAACTGTTGAAGTGCCTTCAGAATCAGGACACGGTTTTCACTCTTCTGCTTTACTGTTGTTTGATAGTAATAAAAATCAAGAATGATCGGCTCATGGGTCGGCAGGTATAGCCTCAATAAAAATTATGAATTTAATTTACGGTGACCACCTATCAAAAAATTAACTTCCTACTTTTTTTTCACATATCTAAGAACTAACTTTCTACTATTTTTTTTTACATTCAAAGGGTTAGTTGGATCCTCTCGTGAGATTATTTGAGGATATAGGAAAAGTAATAAAAATCTACGGGTGATGTGACTCCACTAATAAGATAACTTAGGTCTATGTTCTCTGTTTAATTTCTTTCTTCCATGATATTATGGTTTAGGCCTCTGATTTCTTCTCTATTGTTGTCATTATCTTTTAGATAATCTTGAAACCTTCGTTGTTCTAAACACGGCATTGAAACTGAGAGCTTTCACACCTATTATTCTTGCTCCTTTCTTTGTTGATGTTCCTATTTGTTATTGGTAGATTAGCAGCGTTACGGCAATTGGCTGGGGAGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTATTTGGTTTTGAAAGAGAACTTGTCCTTTTGACGACCCTTTTGAGTTTAAAGAAAACCTCGAACGCCTAAACGATTCTTGCTTAAATTATCCTTGTGCTTTCTGACCCATCTGAGTTTCCCTATATTCTTCGACTATCTCTAGGTGTAGTTCCATCGCTTTAATTTTATTCCAATTGATCAAGGGCTTAGTTTTTTATGTTAACCCTTCTTTACGAATAAACTAAGGATTGAAATGTCGAAGTCTCGTATAGAAATTTCAATTCAAACAAAACCTAAATTTGTTAAATAGAAAAATAGTTGGGTGTATTTAGGTTGCCTCATTTTTGCATTGTCCACTTATTTAATGTGGCCATTACTGAAGTCACCTCAAGTTTGATGTCGATAGTGCAAATTCATGGCAGTTGATGGCATGTGAATAGGTAGATAGGCAAATAAATTGTTTGTGATTGCCCTCCATGTGATTTAGGTACAGGATCATGCAATCGGAAGTTGTGATGATTGATATCTGGATGGTGTTGCTGGAGGTCGCATTCCGGGTAAGCGATGATATCTTCTTACGTCTTTTTCAATCTCGTATCCCAAGTTAA

mRNA sequence

ATGGATTCAAAAGTATACTATATGCTTAGCCGCCAGGACAGATATTACTACTCCCAAGTCTCTCTGATAAACCAAAATGTTCACAACGCAATTGGTCTGACCATCAAGGTTGTAGAGAACTGGAATATTAACCGAGGTGAAATTCTCACTAGTTTCTTACATAAAATAATTTCAGTTATGAAACGAAAGCTCAACAATGTAACAATGTTATTGTGTCCCAATGGAGACAGCCTTGATATCAGTAAACTCTACAGAGATGAGCAATGGCGGCCAAAACTGCAGCTACCAGAAGCCCCGTATTGTTCTCATAGCCATTTCCTGCATTATGTGGTCGACCTTGGCGGTGACGTGCTTGTGCTGAACCAGCTGCATAAACAGGGATCACGGCTGTACCTCCTCCTGTATGAGGTCTACTGCCACCACCATTTTCTCCACCGCCGGCAGCGGCTGCACCTCCATTTGCACGACGAATCACATTAGAAACGGTGATTGCACTTGCACTGTATCTTCTGCTAATCTGCGAATAAAAAGTAGGAACAAGAAGAGCTTATTGAAAAACGGGAATAGAAATGGGAATAGGAATAGGACAAGCTTATTGAACAATAATCCACAAGTTAAAGCTTTTGACATGGACGATTTCGTTTGCCTTCAGAATCAGGACACGGTTTTCACTCTTCTGCTTTACTGTTGTTTGATAGTAATAAAAATCAAGAATGATCGGCTCATGGGTCGGCAGTTGGATCCTCTCGTGAGATTATTTGAGGATATAGGAAAAGTAATAAAAATCTACGGATTAGCAGCGTTACGGCAATTGGCTGGGGAGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTACAGGATCATGCAATCGGAAGTTGTGATGATTGATATCTGGATGGTGTTGCTGGAGGTCGCATTCCGGGTAAGCGATGATATCTTCTTACGTCTTTTTCAATCTCGTATCCCAAGTTAA

Coding sequence (CDS)

ATGAGGTCTACTGCCACCACCATTTTCTCCACCGCCGGCAGCGGCTGCACCTCCATTTGCACGACGAATCACATTAGAAACGGTGATTGCACTTGCACTGTATCTTCTGCTAATCTGCGAATAAAAAGTAGGAACAAGAAGAGCTTATTGAAAAACGGGAATAGAAATGGGAATAGGAATAGGACAAGCTTATTGAACAATAATCCACAAGTTAAAGCTTTTGACATGGACGATTTCGTTTGCCTTCAGAATCAGGACACGGTTTTCACTCTTCTGCTTTACTGTTGTTTGATAGTAATAAAAATCAAGAATGATCGGCTCATGGGTCGGCAGTTGGATCCTCTCGTGAGATTATTTGAGGATATAGGAAAAGTAATAAAAATCTACGGATTAGCAGCGTTACGGCAATTGGCTGGGGAGAATGGAGGGCAATTGCTTGAAGTGGAAATGACCAAGCTGGTAAAAACTTCTCTAGAAAGGTACAGGATCATGCAATCGGAAGTTGTGATGATTGATATCTGGATGGTGTTGCTGGAGGTCGCATTCCGGGTAAGCGATGATATCTTCTTACGTCTTTTTCAATCTCGTATCCCAAGTTAA

Protein sequence

MRSTATTIFSTAGSGCTSICTTNHIRNGDCTCTVSSANLRIKSRNKKSLLKNGNRNGNRNRTSLLNNNPQVKAFDMDDFVCLQNQDTVFTLLLYCCLIVIKIKNDRLMGRQLDPLVRLFEDIGKVIKIYGLAALRQLAGENGGQLLEVEMTKLVKTSLERYRIMQSEVVMIDIWMVLLEVAFRVSDDIFLRLFQSRIPS
Homology
[Close]
BLAST of MELO3C034039.jh1 vs. NCBI nr
Match: KGN52183.1 (hypothetical protein Csa_008538 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 3.37e-07
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 140 ENGGQLLEVEMTKLVKTSLERYRIMQSEVVMIDIWMVLLEVAFR 183
           ENGGQL+EVEMTKL       YRIMQSEVV IDIW+VLLEV FR
Sbjct: 6   ENGGQLVEVEMTKL-------YRIMQSEVVTIDIWIVLLEVTFR 42

[Close]
BLAST of MELO3C034039.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613610 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.63e-07
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 140 ENGGQLLEVEMTKLVKTSLERYRIMQSEVVMIDIWMVLLEVAFR 183
           ENGGQL+EVEMTKL       YRIMQSEVV IDIW+VLLEV FR
Sbjct: 6   ENGGQLVEVEMTKL-------YRIMQSEVVTIDIWIVLLEVTFR 42

The following BLAST results are available for this feature:
BLAST of MELO3C034039.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52183.13.37e-0775.00hypothetical protein Csa_008538 [Cucumis sativus][more]
BLAST of MELO3C034039.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034039.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRE71.63e-0775.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613610 PE=4 SV=1[more]
BLAST of MELO3C034039.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034039.jh1.t1MELO3C034039.jh1.t1mRNA