MELO3C034013.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C034013.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	transcription factor TRY
Location	chr09: 24435828 .. 24436834 (-)
RNA-Seq Expression	MELO3C034013.jh1
Synteny	MELO3C034013.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCAAAGATTTCAATATTTTAATCTTGTCTTTTATCCCTGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAACTTACTTCCTAAAGTTTGGTGGGAAGAAGAAACTACAGGCATGCACATGAACTTAAATTTGCCCCTGGATGTTTCAAATCTGTCTATCACAGTTTTTCCTAAAAATTCTTTCATTCCCAGTTCTTTAGCTTACTGTCTTTGTGCTGCCTCTAATCTTTGAAGAAACATGGACAATCATCGTCACCAGAAACAGGCCAAAATCTCACCACTAGATTCCGAAGGTCCATTTCATCATTCATTACCTCGATTTTCTACCTTACTCATCCTAGTGTCGGTCTCTTCGTCATGATTTTCTCACTTTTTGATGATATTTTAAGTCCTACTTCCGTTTTGTGAATTTGTGGCTTATTATCTAACAGAGGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTAAGTTGGGTTCAAAACAACCCAGGTTTACAGAATTCTCCCCCTTATCTAAACAATGATGAAGACAGATTCTGTTCCCTCCCCTTTATTGCTTTCCAATTACCTCAAGCATCTGAGTTTCCAAGAAAATGGTCTTTCATTTCAGGTGGGATCTCATAGCAGGCAGAATTCCGGGGCGAAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATACAGGCAGTGGGGGTTCAGTCAATAAGTCCTCAAAGACTTCTGATTGGTTCTCTACTTCCTCTTTTGTGGTCTCCCTGAAGATAACCCTCTCCCTAATAGCTTTAGTGTATTACAAGTACCCTTTCTAAGAACACATGGTATGGAACTGAGCTATCTTTTATCAATCAAATAACACAGTATAATTTATGATTCCAAA

mRNA sequence

CTCTCTCTCTCTCAAAGATTTCAATATTTTAATCTTGTCTTTTATCCCTGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAACTTACTTCCTAAAGTTTGGTGGGAAGAAGAAACTACAGGCATGCACATGAACTTAAATTTGCCCCTGGATGTTTCAAATCTGTCTATCACAGTTTTTCCTAAAAATTCTTTCATTCCCAGTTCTTTAGCTTACTGTCTTTGTGCTGCCTCTAATCTTTGAAGAAACATGGACAATCATCGTCACCAGAAACAGGCCAAAATCTCACCACTAGATTCCGAAGAGGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTCATAGCAGGCAGAATTCCGGGGCGAAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATACAGGCAGTGGGGGTTCAGTCAATAAGTCCTCAAAGACTTCTGATTGGTTCTCTACTTCCTCTTTTGTGGTCTCCCTGAAGATAACCCTCTCCCTAATAGCTTTAGTGTATTACAAGTACCCTTTCTAAGAACACATGGTATGGAACTGAGCTATCTTTTATCAATCAAATAACACAGTATAATTTATGATTCCAAA

Coding sequence (CDS)

ATGGACAATCATCGTCACCAGAAACAGGCCAAAATCTCACCACTAGATTCCGAAGAGGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTCATAGCAGGCAGAATTCCGGGGCGAAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGA

Protein sequence

MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

Homology

[Close]

BLAST of MELO3C034013.jh1 vs. NCBI nr
Match: XP_016898876.1 (PREDICTED: transcription factor TRY [Cucumis melo] >KAA0042563.1 transcription factor TRY [Cucumis melo var. makuwa] >TYK05967.1 transcription factor TRY [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (441), Expect = 6.53e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. NCBI nr
Match: XP_031742154.1 (transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription factor [Cucumis sativus] >KGN49883.1 hypothetical protein Csa_000375 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 2.19e-53
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQK AKISPL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. NCBI nr
Match: XP_038875738.1 (transcription factor TRY [Benincasa hispida])

HSP 1 Score: 167 bits (424), Expect = 2.57e-52
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKI+ L+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKITLLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. NCBI nr
Match: XP_022973073.1 (transcription factor TRY-like [Cucurbita maxima] >XP_023549596.1 transcription factor TRY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163 bits (412), Expect = 1.74e-50
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          M+NHR QK AK+ PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MNNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. NCBI nr
Match: XP_022996343.1 (transcription factor TRY-like [Cucurbita maxima] >KAG6605768.1 Transcription factor TRY, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (405), Expect = 2.04e-49
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHR+Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGF  RRRG
Sbjct: 61 PEEIERYWIMTHLEGFAVRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot
Match: Q8GV05 (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-26
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 2  DNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKP 61
          D  R +KQ KI+  DSEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+P
Sbjct: 5  DRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQP 64

Query: 62 EEIERYWIMTHLEGFGKRRR 82
          EEIERYWIM + EGF  +RR
Sbjct: 65 EEIERYWIMRNSEGFADKRR 84

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot
Match: O22059 (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.4e-21
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5  RHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEI
Sbjct: 13 RRRRQSKAKASCSEEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEI 72

Query: 65 ERYWIMTHLEGFGKRRR 82
          ERYW+M H   F  RRR
Sbjct: 73 ERYWLMKHGVVFANRRR 89

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot
Match: B3H4X8 (MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 5  RHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R +KQ+K +  D+ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++I
Sbjct: 11 RSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDI 70

Query: 65 ERYWIMTHLEGFGKRRR 82
          ERYWIM + +    +RR
Sbjct: 71 ERYWIMRNCDHCSHKRR 87

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot
Match: Q84RD1 (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.7e-20
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 13 SPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTH 72
          S  DSEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM +
Sbjct: 23 SRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIERYWIMRN 82

Query: 73 LEGFGKRRR 82
           + F  +RR
Sbjct: 83 SDYFSHKRR 91

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot
Match: Q9M157 (MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.8e-20
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPL---DSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIP 60
          MDNHR  KQ K + +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIP
Sbjct: 1  MDNHRRTKQPKTNSIVTSSSEEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIP 60

Query: 61 GRKPEEIERYWIM 71
          GR   EIER+W+M
Sbjct: 61 GRTAGEIERFWVM 73

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C2B2 (Transcription factor TRY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00630 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 3.16e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DSB1 (transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 3.16e-55
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL
Match: I6NF75 (R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1)

HSP 1 Score: 170 bits (431), Expect = 1.06e-53
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQK AKISPL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IC17 (transcription factor TRY-like OS=Cucurbita maxima OX=3661 GN=LOC111471570 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 8.43e-51
Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          M+NHR QK AK+ PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MNNHRQQKHAKLPPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGFGKRRRG
Sbjct: 61 PEEIERYWIMTHLEGFGKRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KAI4 (transcription factor TRY-like OS=Cucurbita maxima OX=3661 GN=LOC111491604 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 9.87e-50
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHR+Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGKRRRG 82
          PEEIERYWIMTHLEGF  RRRG
Sbjct: 61 PEEIERYWIMTHLEGFAVRRRG 82

[Close]

BLAST of MELO3C034013.jh1 vs. TAIR 10
Match: AT5G53200.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-27
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 2  DNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKP 61
          D  R +KQ KI+  DSEEVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+P
Sbjct: 5  DRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQP 64

Query: 62 EEIERYWIMTHLEGFGKRRR 82
          EEIERYWIM + EGF  +RR
Sbjct: 65 EEIERYWIMRNSEGFADKRR 84

[Close]

BLAST of MELO3C034013.jh1 vs. TAIR 10
Match: AT2G46410.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-22
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5  RHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEI
Sbjct: 13 RRRRQSKAKASCSEEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEI 72

Query: 65 ERYWIMTHLEGFGKRRR 82
          ERYW+M H   F  RRR
Sbjct: 73 ERYWLMKHGVVFANRRR 89

[Close]

BLAST of MELO3C034013.jh1 vs. TAIR 10
Match: AT2G30424.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 5  RHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R +KQ+K +  D+ EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++I
Sbjct: 11 RSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDI 70

Query: 65 ERYWIMTHLEGFGKRRR 82
          ERYWIM + +    +RR
Sbjct: 71 ERYWIMRNCDHCSHKRR 87

[Close]

BLAST of MELO3C034013.jh1 vs. TAIR 10
Match: AT2G30420.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-21
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 13 SPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTH 72
          S  DSEEVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM +
Sbjct: 23 SRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIERYWIMRN 82

Query: 73 LEGFGKRRR 82
           + F  +RR
Sbjct: 83 SDYFSHKRR 91

[Close]

BLAST of MELO3C034013.jh1 vs. TAIR 10
Match: AT4G01060.3 (CAPRICE-like MYB3 )

HSP 1 Score: 97.4 bits (241), Expect = 5.5e-21
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 1  MDNHRHQKQAKISPL---DSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIP 60
          MDNHR  KQ K + +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GDRW+LIAGRIP
Sbjct: 1  MDNHRRTKQPKTNSIVTSSSEEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIP 60

Query: 61 GRKPEEIERYWIM 71
          GR   EIER+W+M
Sbjct: 61 GRTAGEIERFWVM 73

The following BLAST results are available for this feature:

BLAST of MELO3C034013.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898876.1	6.53e-55	100.00	PREDICTED: transcription factor TRY [Cucumis melo] >KAA0042563.1 transcription f...	[more]
XP_031742154.1	2.19e-53	97.56	transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription fact...	[more]
XP_038875738.1	2.57e-52	96.34	transcription factor TRY [Benincasa hispida]	[more]
XP_022973073.1	1.74e-50	92.68	transcription factor TRY-like [Cucurbita maxima] >XP_023549596.1 transcription f...	[more]
XP_022996343.1	2.04e-49	91.46	transcription factor TRY-like [Cucurbita maxima] >KAG6605768.1 Transcription fac...	[more]

BLAST of MELO3C034013.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GV05	1.5e-26	68.75	Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1	[more]
O22059	2.4e-21	61.04	Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1	[more]
B3H4X8	2.0e-20	57.14	MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 ...	[more]
Q84RD1	2.7e-20	65.22	MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 ...	[more]
Q9M157	7.8e-20	60.27	MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 ...	[more]

BLAST of MELO3C034013.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2B2	3.16e-55	100.00	Transcription factor TRY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DSB1	3.16e-55	100.00	transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1	[more]
I6NF75	1.06e-53	97.56	R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1	[more]
A0A6J1IC17	8.43e-51	92.68	transcription factor TRY-like OS=Cucurbita maxima OX=3661 GN=LOC111471570 PE=4 S...	[more]
A0A6J1KAI4	9.87e-50	91.46	transcription factor TRY-like OS=Cucurbita maxima OX=3661 GN=LOC111491604 PE=4 S...	[more]

BLAST of MELO3C034013.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53200.1	1.0e-27	68.75	Homeodomain-like superfamily protein	[more]
AT2G46410.1	1.7e-22	61.04	Homeodomain-like superfamily protein	[more]
AT2G30424.1	1.5e-21	57.14	Homeodomain-like superfamily protein	[more]
AT2G30420.1	1.9e-21	65.22	Homeodomain-like superfamily protein	[more]
AT4G01060.3	5.5e-21	60.27	CAPRICE-like MYB3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..74 e-value: 8.4E-6 score: 35.3
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..68 e-value: 2.36636E-6 score: 38.7106
None	No IPR available	GENE3D	1.10.10.60		coord: 30..74 e-value: 1.8E-9 score: 39.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47998:SF12	MYB-LIKE TRANSCRIPTION FACTOR ETC3	coord: 1..79
None	No IPR available	PANTHER	PTHR47998	TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1	coord: 1..79
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 31..69 e-value: 3.0E-7 score: 30.5
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 31..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034013.jh1.t1	MELO3C034013.jh1.t1	mRNA