MELO3C033956 (gene) Melon (DHL92) v4

Overview
NameMELO3C033956
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr09: 16742665 .. 16743505 (+)
RNA-Seq ExpressionMELO3C033956
SyntenyMELO3C033956
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGACCTTCAAGATCCCAGGTTGTAATATCCATACTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGTGTGACCCAATGTGGAGTGGTTTTGGGTGGAATGATGAAAAAAATGCATCGTCGTAGAGAAAGAAGTCTTTGACGATTGGGTCAAGGTTCGTTACTAGTCATTTGAACACTTACTGTACTATTATTTCAATACATGGACTAACAATTTATTATTGCACTTATACAGAGTCATCTGGCGGCGAAAGGTCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGAACTGAGTGTTTTGCGGACATTGGGTTAAACAATCCTGCTGGGTATGACGCATTTGTCGCTGACGCTGCGACGGATACGGACTTCTCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTTAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAAGTGAATCGCATTGCTGAGTGGCCTGTCCTATAACGTCAAGACGCAAGCCAAACACGTCAAGAGATTATTCGACAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCATACTACAGCATCATTCTTCAAGAAAACTGA

mRNA sequence

ATGATGACCTTCAAGATCCCAGGTTGTAATATCCATACTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGTGTGACCCAATGTGGAGTGAGAAAGAAGTCTTTGACGATTGGGTCAAGAGTCATCTGGCGGCGAAAGGTCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGAACTGAGTGTTTTGCGGACATTGGGTTAAACAATCCTGCTGGGTATGACGCATTTGTCGCTGACGCTGCGACGGATACGGACTTCTCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTTAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCATACTACAGCATCATTCTTCAAGAAAACTGA

Coding sequence (CDS)

ATGATGACCTTCAAGATCCCAGGTTGTAATATCCATACTTCAACCATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGTGTGACCCAATGTGGAGTGAGAAAGAAGTCTTTGACGATTGGGTCAAGAGTCATCTGGCGGCGAAAGGTCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGAACTGAGTGTTTTGCGGACATTGGGTTAAACAATCCTGCTGGGTATGACGCATTTGTCGCTGACGCTGCGACGGATACGGACTTCTCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTTAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGGAAATGAACAATTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATACGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACTCATACTACAGCATCATTCTTCAAGAAAACTGA

Protein sequence

MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWSEKEVFDDWVKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDTDFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDNMKYSYYSIILQEN
Homology
BLAST of MELO3C033956 vs. NCBI nr
Match: KAA0050782.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 190/253 (75.10%), Postives = 195/253 (77.08%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCNIH STIDSRIKLMKRMFHALA+M DP  S             EKEVFDDW
Sbjct: 1   MMAFKIPGCNIHASTIDSRIKLMKRMFHALADMRDPNCSGFGWNDEKKCIIAEKEVFDDW 60

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
           VKSH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+PAGYDAF AD   DT
Sbjct: 61  VKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADTVLDT 120

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV SGSK KRPGHATDSGDIVRTAIEYGNE 
Sbjct: 121 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKWKRPGHATDSGDIVRTAIEYGNEQ 180

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RI+MRNVDDMKAFL+VPDN
Sbjct: 181 LHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLKVPDN 240

BLAST of MELO3C033956 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.7e-95
Identity = 193/253 (76.28%), Postives = 194/253 (76.68%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCNIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 393 MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 452

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG NNP GYDAF ADA  DT
Sbjct: 453 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNNPPGYDAFAADAVPDT 512

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DFSPMYS GLNMSPDDLM TRTARVSERRNV SGSKRKRPGHATDSGDIVRTAIEYGNE 
Sbjct: 513 DFSPMYSLGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 572

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 573 LHRIAEWPILQRQDATQTRQEIVQQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 632

BLAST of MELO3C033956 vs. NCBI nr
Match: KAA0065737.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 9.2e-94
Identity = 191/253 (75.49%), Postives = 193/253 (76.28%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MMTFKIPGCNIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 47  MMTFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 106

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+P GYDAF ADA  DT
Sbjct: 107 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAVPDT 166

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV S SKRKRPGHATDSGDIVRTAIEYGNE 
Sbjct: 167 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSESKRKRPGHATDSGDIVRTAIEYGNEQ 226

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 227 LHRIAEWPILQRQDATQTRQDIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 286

BLAST of MELO3C033956 vs. NCBI nr
Match: KAA0044843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 6.0e-93
Identity = 188/253 (74.31%), Postives = 191/253 (75.49%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCN H STIDSRIKLMKRMFHALAEMC P  S             EKEVFDDW
Sbjct: 51  MMAFKIPGCNNHASTIDSRIKLMKRMFHALAEMCGPNCSGFGWNDEKKCIIAEKEVFDDW 110

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATG R E FADIG N+PAGYDAF AD   DT
Sbjct: 111 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGDRAESFADIGSNDPAGYDAFAADIVPDT 170

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV SGSKRKRPGHA DSGDIVRTAIEYGNE 
Sbjct: 171 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHAIDSGDIVRTAIEYGNEQ 230

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RI+MRNVDDMKAFLEVPDN
Sbjct: 231 LHRIAEWSILQCQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDN 290

BLAST of MELO3C033956 vs. NCBI nr
Match: KAA0048363.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 188/253 (74.31%), Postives = 191/253 (75.49%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPG NIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 47  MMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 106

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH  AKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+P GYDAF ADA  DT
Sbjct: 107 --SHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDT 166

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ 180
           DF PMYS  LNMSPDDLM TRTA+VSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ
Sbjct: 167 DFPPMYSLRLNMSPDDLMETRTAKVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ 226

Query: 181 -------------------------LEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                    LEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 227 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 286

BLAST of MELO3C033956 vs. ExPASy TrEMBL
Match: A0A5A7U4M2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00330 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.2e-96
Identity = 190/253 (75.10%), Postives = 195/253 (77.08%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCNIH STIDSRIKLMKRMFHALA+M DP  S             EKEVFDDW
Sbjct: 1   MMAFKIPGCNIHASTIDSRIKLMKRMFHALADMRDPNCSGFGWNDEKKCIIAEKEVFDDW 60

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
           VKSH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+PAGYDAF AD   DT
Sbjct: 61  VKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGYDAFAADTVLDT 120

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV SGSK KRPGHATDSGDIVRTAIEYGNE 
Sbjct: 121 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKWKRPGHATDSGDIVRTAIEYGNEQ 180

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RI+MRNVDDMKAFL+VPDN
Sbjct: 181 LHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLKVPDN 240

BLAST of MELO3C033956 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.8e-95
Identity = 193/253 (76.28%), Postives = 194/253 (76.68%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCNIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 393 MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 452

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG NNP GYDAF ADA  DT
Sbjct: 453 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNNPPGYDAFAADAVPDT 512

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DFSPMYS GLNMSPDDLM TRTARVSERRNV SGSKRKRPGHATDSGDIVRTAIEYGNE 
Sbjct: 513 DFSPMYSLGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 572

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 573 LHRIAEWPILQRQDATQTRQEIVQQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 632

BLAST of MELO3C033956 vs. ExPASy TrEMBL
Match: A0A5A7VF53 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00250 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.5e-94
Identity = 191/253 (75.49%), Postives = 193/253 (76.28%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MMTFKIPGCNIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 47  MMTFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 106

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+P GYDAF ADA  DT
Sbjct: 107 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAVPDT 166

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV S SKRKRPGHATDSGDIVRTAIEYGNE 
Sbjct: 167 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSESKRKRPGHATDSGDIVRTAIEYGNEQ 226

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 227 LHRIAEWPILQRQDATQTRQDIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 286

BLAST of MELO3C033956 vs. ExPASy TrEMBL
Match: A0A5A7TMW5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001350 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.9e-93
Identity = 188/253 (74.31%), Postives = 191/253 (75.49%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPGCN H STIDSRIKLMKRMFHALAEMC P  S             EKEVFDDW
Sbjct: 51  MMAFKIPGCNNHASTIDSRIKLMKRMFHALAEMCGPNCSGFGWNDEKKCIIAEKEVFDDW 110

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH AAKGLLNKSFVHYDELSYVFGKDRATG R E FADIG N+PAGYDAF AD   DT
Sbjct: 111 --SHPAAKGLLNKSFVHYDELSYVFGKDRATGDRAESFADIGSNDPAGYDAFAADIVPDT 170

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNE- 180
           DF PMYS GLNMSPDDLM TRTARVSERRNV SGSKRKRPGHA DSGDIVRTAIEYGNE 
Sbjct: 171 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHAIDSGDIVRTAIEYGNEQ 230

Query: 181 ------------------------QLEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                   QLEAIPELTLMDRCRL+RI+MRNVDDMKAFLEVPDN
Sbjct: 231 LHRIAEWSILQCQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDN 290

BLAST of MELO3C033956 vs. ExPASy TrEMBL
Match: A0A5A7TXK4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00820 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.5e-92
Identity = 188/253 (74.31%), Postives = 191/253 (75.49%), Query Frame = 0

Query: 1   MMTFKIPGCNIHTSTIDSRIKLMKRMFHALAEMCDPMWS-------------EKEVFDDW 60
           MM FKIPG NIH STIDSRIKLMKRMFHALAEM  P  S             EKEVFDDW
Sbjct: 47  MMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW 106

Query: 61  VKSHLAAKGLLNKSFVHYDELSYVFGKDRATGGRTECFADIGLNNPAGYDAFVADAATDT 120
             SH  AKGLLNKSFVHYDELSYVFGKDRATGGR E FADIG N+P GYDAF ADA  DT
Sbjct: 107 --SHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDT 166

Query: 121 DFSPMYSQGLNMSPDDLMGTRTARVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ 180
           DF PMYS  LNMSPDDLM TRTA+VSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ
Sbjct: 167 DFPPMYSLRLNMSPDDLMETRTAKVSERRNVLSGSKRKRPGHATDSGDIVRTAIEYGNEQ 226

Query: 181 -------------------------LEAIPELTLMDRCRLIRILMRNVDDMKAFLEVPDN 216
                                    LEAIPELTLMDRCRL+RILMRNVDDMKAFLEVPDN
Sbjct: 227 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDN 286

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050782.11.3e-9575.10retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0034843.13.7e-9576.28retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0065737.19.2e-9475.49retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0044843.16.0e-9374.31retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048363.11.1e-9174.31retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U4M26.2e-9675.10Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SWD81.8e-9576.28Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VF534.5e-9475.49Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TMW52.9e-9374.31Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TXK45.5e-9274.31Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033956.1MELO3C033956.1mRNA