MELO3C033947 (gene) Melon (DHL92) v4

Overview
NameMELO3C033947
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUDP-glucose:glycoprotein glucosyltransferase-like isoform X2
Locationchr09: 16193214 .. 16194228 (-)
RNA-Seq ExpressionMELO3C033947
SyntenyMELO3C033947
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAATTCACGTTTTTGGCCAGAAAAACGCTATTTTCGGATTCTATTCTTCTGTATCAGTTATTTATCGTCATAAAAGGTAAAAAAAATTAAATAATTTTATTTTAAAAAAATTCATTAAAATAAAATTTAATTCAATTTCCCCCCAAATTATTAAACGTTAATCTCCATCTCTCTCTCCTCGTTACTTCTCGTTCTCCAAGTCTGAAGCCCTAGGAACATCTCTTCAAGCTTCTACCGCTTCTATTGCAATATCTACACCTTCATCTCCTTCTTCATTCTTGTTGGTATGCCTTTCTTAGTTTTAATTGGAGTTTCGTCTACCGCTTCTCTTGCAATCTCTATACCTTCATCTCCTTCTTTCAATTCCTACCAATATGCGTTTCTTAGCTTCAATTGAAGTATTTACATCGCTTCTGTTCATTTTTCATTGTTTAATCTTTGTTATGTGTTTACTTTTTTCATAACACTACCCTTGCATACGGTGTTTCCTCCGCTGCCGCTCCTCCCCTTTTCTGAAGCCCCTCCCTTCCTCCTTTTTGTTTCCTAAAACCAACCCTCCACTGTTGTGGTTTTCCAAACCCCCCTCCCCCCTTCTGTTTTCTGACCCTCTTCCATTCTGATTTCGAAACCTCTTCCCTCTCTCACCTCCCGCAATTTTGATTTCGAACGCCCCCTCTCTGATTTGGATTTAGAACCCCCCTCCATTTCGATTTAGATTTTGAAGCCATATATGTATATTGTTTTGGGGCTTCTTCTTTTTTCTTTTTATCCTTGTATATTGTTTCATTTTTCTTCAGTAAGTTTGTTCTCTTGCATATATATGTATATATGTCTTCGATTCATATAAGTTCCTTGCTAATAAGTGTGGGAGACTAGTTATTTTGCTGAATTTATTGAACTGAATCAGGTAAACAAATTACGGTTTGAAGCAGATGGTTTAGCTGATGATGCTCCTGAAATGCATCACGTTGAAGGAGCTTTTTTGGAAATGCTTCTTAAGTTCACTTAA

mRNA sequence

ATGTCAAAATTCACGTTTTTGGCCAGAAAAACGCTATTTTCGGATTCTATTCTTCTGTATCAGTTATTTATCGTCATAAAAGCCCTAGGAACATCTCTTCAAGCTTCTACCGCTTCTATTGCAATATCTACACCTTCATCTCCTTCTTCATTCTTGTTGGTAAACAAATTACGGTTTGAAGCAGATGGTTTAGCTGATGATGCTCCTGAAATGCATCACGTTGAAGGAGCTTTTTTGGAAATGCTTCTTAAGTTCACTTAA

Coding sequence (CDS)

ATGTCAAAATTCACGTTTTTGGCCAGAAAAACGCTATTTTCGGATTCTATTCTTCTGTATCAGTTATTTATCGTCATAAAAGCCCTAGGAACATCTCTTCAAGCTTCTACCGCTTCTATTGCAATATCTACACCTTCATCTCCTTCTTCATTCTTGTTGGTAAACAAATTACGGTTTGAAGCAGATGGTTTAGCTGATGATGCTCCTGAAATGCATCACGTTGAAGGAGCTTTTTTGGAAATGCTTCTTAAGTTCACTTAA

Protein sequence

MSKFTFLARKTLFSDSILLYQLFIVIKALGTSLQASTASIAISTPSSPSSFLLVNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT
Homology
[Close]
BLAST of MELO3C033947 vs. NCBI nr
Match: XP_023535943.1 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 617 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 649

[Close]
BLAST of MELO3C033947 vs. NCBI nr
Match: XP_022978696.1 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 619 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 651

[Close]
BLAST of MELO3C033947 vs. NCBI nr
Match: XP_023535951.1 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 617 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 649

[Close]
BLAST of MELO3C033947 vs. NCBI nr
Match: XP_022978686.1 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 619 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 651

[Close]
BLAST of MELO3C033947 vs. NCBI nr
Match: KAG6600362.1 (UDP-glucose:glycoprotein glucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           +NKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 617 LNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 649

[Close]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match: A0A6J1INN5 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478572 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 619 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 651

[Close]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match: A0A6J1INL6 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478572 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           VNKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 619 VNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 651

[Close]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match: A0A6J1FPX5 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447403 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           +NKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 617 LNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 649

[Close]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match: A0A6J1FNJ7 (UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447403 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLLKFT 87
           +NKLR EADGLADDAPEMHHVEGAF+E LL  T
Sbjct: 617 LNKLRLEADGLADDAPEMHHVEGAFVETLLPKT 649

[Close]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match: A0A6J1D7C0 (UDP-glucose:glycoprotein glucosyltransferase OS=Momordica charantia OX=3673 GN=LOC111017692 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 54  VNKLRFEADGLADDAPEMHHVEGAFLEMLL 84
           VNKLR EADGLADDAPEMHHVEGAF++ LL
Sbjct: 617 VNKLRIEADGLADDAPEMHHVEGAFVDTLL 646

The following BLAST results are available for this feature:
BLAST of MELO3C033947 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023535943.11.1e-0584.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 [Cucurbita pepo sub... [more]
XP_022978696.11.1e-0584.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 [Cucurbita maxima][more]
XP_023535951.11.1e-0584.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 [Cucurbita pepo sub... [more]
XP_022978686.11.1e-0584.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 [Cucurbita maxima][more]
KAG6600362.12.4e-0581.82UDP-glucose:glycoprotein glucosyltransferase, partial [Cucurbita argyrosperma su... [more]
BLAST of MELO3C033947 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1INN55.3e-0684.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 OS=Cucurbita maxima... [more]
A0A6J1INL65.3e-0684.85UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 OS=Cucurbita maxima... [more]
A0A6J1FPX51.2e-0581.82UDP-glucose:glycoprotein glucosyltransferase-like isoform X2 OS=Cucurbita moscha... [more]
A0A6J1FNJ71.2e-0581.82UDP-glucose:glycoprotein glucosyltransferase-like isoform X1 OS=Cucurbita moscha... [more]
A0A6J1D7C02.0e-0586.67UDP-glucose:glycoprotein glucosyltransferase OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of MELO3C033947 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033947.1MELO3C033947.1mRNA