MELO3C033924 (gene) Melon (DHL92) v4

Overview
NameMELO3C033924
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmyosin-11 isoform X1
Locationchr09: 14627717 .. 14628610 (+)
RNA-Seq ExpressionMELO3C033924
SyntenyMELO3C033924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAAGTAATGGTTGGGATCCAAATTCGGCAGGTTCGATGAGAAATTCCTGATTTTGAATAAACCCCTTTTAGCATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGGTAAAAAGATATCTCTTAGCTTTCGATTTGTTGAAATTTGTAATGGTATTTTGTTTTTTGGATATTGACTTGTATACTATTCAATAAAAGTCTAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGTAATGTGATTTTGAAAGCCATAGTAATTAGCTACATTTTTTCTTTACTCATGAAGAAATGTTGGAAGCTACTATTTAAGATGAAACTTGTTTTTGGAAGAATTCTATTTATGAAACAATCAAGCTTGTTAGGGAAATAAAAATAGAAAAGATCAATGAGAAAATTTACCATTTTGTGTTGCAACTGTATGGCACATGGACACAAACTTCCAAAATTTTCCTGTTCGTAACTAGGCATCTAATGGAGCAACTTGAAAATTGTCATTGTTTTTGTAGGTAAGGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

mRNA sequence

ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

Coding sequence (CDS)

ATGTCATCGACAGTCGATTTTGATTTGAAAATGGGATCAGATATAACCAGTCAAATTGCCCAAGTGAACATCTCTCGCTTTCCCAATCTCTACAATCTCTCCCAAACAAAGACACACGGCACTGAGATTTTGGCCAAATACTTCCACTTCAAGTTTGTCGAGTACCGTGCCCAAGTGTGTTTTCATCTCAAGAACCAGATTTCTTTTCTTTTCTTGAGATCTGAAGCAAAACTGAAAGAATTTTTAAATCATGAAGCAAGAAACAGAGATCAAAGTTGTATTCAAATTACAGTTTCAGGCAACACAAGATCATCAAAAGTTTGCTTTATTAACGAAGCTTCAATTCATTTTGTAGATTTTGAAGCAGAAACTGAACTCATGACAACTTTCGTTCATCTTAAGTTTGCAAACTCTGGTGCCATATTATATGTTGGTTCACTTTATTTCTAA

Protein sequence

MSSTVDFDLKMGSDITSQIAQVNISRFPNLYNLSQTKTHGTEILAKYFHFKFVEYRAQVCFHLKNQISFLFLRSEAKLKEFLNHEARNRDQSCIQITVSGNTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLYF
Homology
[Close]
BLAST of MELO3C033924 vs. NCBI nr
Match: KAG7011499.1 (hypothetical protein SDJN02_26405, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLYF 150
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+VGSLYF
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHVGSLYF 137

[Close]
BLAST of MELO3C033924 vs. NCBI nr
Match: KAG7035631.1 (hypothetical protein SDJN02_02429 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-06
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLY 149
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+VGSLY
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHVGSLY 136

[Close]
BLAST of MELO3C033924 vs. NCBI nr
Match: KAG6571803.1 (hypothetical protein SDJN03_28531, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. NCBI nr
Match: XP_022159186.1 (myosin-11 isoform X1 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. NCBI nr
Match: XP_022952238.1 (interaptin isoform X1 [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match: A0A3Q0EXY5 (uncharacterized protein PFB0145c OS=Vigna radiata var. radiata OX=3916 GN=LOC106765273 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYVGSLY 149
           +T SSK  F+ E+SI F DF AETE +T  + LKFANSGAIL+VG+ Y
Sbjct: 89  STGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVGTFY 136

[Close]
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match: A0A6J1I6U5 (interaptin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match: A0A6J1I4A8 (interaptin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match: A0A6J1E362 (myosin-11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025605 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match: A0A6J1E357 (myosin-11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025605 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 101 NTRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           +T SSK  F+ EASI F DFEAETE MT  + LKFANSGAIL+V
Sbjct: 89  STGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHV 132

[Close]
BLAST of MELO3C033924 vs. TAIR 10
Match: AT5G52280.1 (Myosin heavy chain-related protein )

HSP 1 Score: 44.7 bits (104), Expect = 7.7e-05
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 102 TRSSKVCFINEASIHFVDFEAETELMTTFVHLKFANSGAILYV 145
           T SSK  F+ EASI F DF  E + +T  + LKFANSGA+L V
Sbjct: 91  TGSSKSGFLGEASIDFADFLTEADPLTVSLPLKFANSGAVLNV 133

The following BLAST results are available for this feature:
BLAST of MELO3C033924 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7011499.13.5e-0771.43hypothetical protein SDJN02_26405, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7035631.11.3e-0670.83hypothetical protein SDJN02_02429 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6571803.12.8e-0468.18hypothetical protein SDJN03_28531, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022159186.12.8e-0468.18myosin-11 isoform X1 [Momordica charantia][more]
XP_022952238.12.8e-0468.18interaptin isoform X1 [Cucurbita moschata][more]
BLAST of MELO3C033924 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A3Q0EXY51.3e-0460.42uncharacterized protein PFB0145c OS=Vigna radiata var. radiata OX=3916 GN=LOC106... [more]
A0A6J1I6U51.3e-0468.18interaptin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1[more]
A0A6J1I4A81.3e-0468.18interaptin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470530 PE=4 SV=1[more]
A0A6J1E3621.3e-0468.18myosin-11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025605 PE=4 SV=1[more]
A0A6J1E3571.3e-0468.18myosin-11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025605 PE=4 SV=1[more]
BLAST of MELO3C033924 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52280.17.7e-0555.81Myosin heavy chain-related protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033924.1MELO3C033924.1mRNA