MELO3C033898.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C033898.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Location	chr09: 13590513 .. 13593953 (-)
RNA-Seq Expression	MELO3C033898.jh1
Synteny	MELO3C033898.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCCTCTCCTACTTCTTCTTCTTCTTCCTCTCCTACTTCTTCTTCTTCTTCTTTCTTTTTTCATCCGACTTTCAGTGCGACATGTTCGTCGGCAACTCTTTCAGGCCACCGCGTTCATCGAACACCCAATCAATAGATCCCTCTTACTTTCCCCAATTTCAGGTTTCTTTTTTTAATTCTCTCTTTCTAATATGCTTAATTAATTTCCCTGTATCTTTCTTTCTTTTGTTTTCGATCCATTTCCATGCAATATCCTTATCAAATATATTGTTTTAGGAACTTGCGAATCTTTTCTGATTGTTTTTTCTTTCTGGGTTTTGGATTTCTCGCTAATTTATCTTCTCAAATGTGGTTTGGAGAAGTTATGGCTTTTGGAGTAAGAATTGAATCCGTCATTTTTTTTCTTTGCTCGCAAATGTTTATTTGTTTAATTTGCTCAACCTCTTCCTTAATTTTCCTTCTTTGGTTTGGTCTCTTATTAATTTTATATGCAGAGAGATAACATGTTTTTGGGCTTTTTTTAGTATCTTGTGAGGTTTTGTTGGTGATGCCATGAGGTTGGTTTTAATTCAATGGTGTATGGTTGTGAGTTGCAACCTTTTCTATAGATTGTCAAGAGTTGGGCTTCAATGTTATCTATAGATTTCCACCACCAAAGTATTTAGAAAGGGCAGTTTGTTTTTCACCCTATTTTTCACCCTATTTAATTGATCAATAATGTTGTCCGGATATTACTAGTGTACAAAACATACAAAACATTTTAAGTACTATAGTAAAAGTGAATCAAATGACATTCCATGTGTAGTTGATGTTTGATGGAATGGGGAGTTCAGAATGAATATAAGCTGTTTGATGAACGGATTTTGTGAGTTCCAAGATTCATTGGAAGTGGGTATTTTGTGGATTCATAATTAGTGATGGAAGTCCATCATGAATCTTTTTTGCGTGCCCATTTTCTTCATATCTTTGAACCATCTCCACAACATTTCTAAGAATTCTTTTGTTTCTTTTGCCATTTTTCTTGCCAGTTGTTTTACTCAATCACTCAGTTTTCAATTCTCAAGATGTTTACCTTATTCATTGTTTAAAATGCATGAGCTTCTGTTTGTATCAATTATTGATTTGAGTGTTTTTTTTCTATGTGTAGGATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAATCGGTTAAACCACCATCATCGGTATGAGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATCCTAGGGCCGCTTGTAAACATTGTGGGGCTTCATATGCTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATCCATTGAAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTGATGGCTACATCATTCACTCAAGAAAATTGTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAAGTGAAGGGTTTCACCAATTTTGTCGGACATTAAATCCAAAGTTTGTGATTCCATCAAGAGTAACCGTTGCAAAAGATTGTTTTCAAATGTATATGAAGAAGAAAAAAAAGTTGAAAAATGCATTAACTCGAAGTGGCCAAAGAGTTTGTTTAACAACGGATACGTGGACTTCTGTACAAAATATTAATTATATGGTTATAACGGCTCATTTCATTGATGATGATTGGAACTTGCACAAAAGAATTTTGAACTTTTGTCAAGTAGCTAATCATAAAGGAGATACCATAGGTAGAGCCATTGAAAAGTGCTTAGAAGGTTGGGGTATTGATAGGCTCTTTACTGTAACGGTTGATAACGCGAGTTCAAATGATGTAGCCATTGCCTACTTGGTTAAAAAGTTTAAAGGCAGAAATGGGTTGGTTTTGGATGGTGAATTTATTCACATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTGATGCCTTAAAAGATTTGCATGTGTCTATCATTCGAATCAGAAATGCTGTGAAGTATGTTAGGTCATCTCCTGCTAGATTGCAAATATTTAAAGATTTTGCTAAAGAAGATAAGATGTCAACAAAAAATTGTCTTACAATGGATGTTCCGACACAATGAAATTCTACTTTTACTATGTTGGATGGAGCAATTAAGTGTCAAAAGACTTTTGAAAGATTGGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTAGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAGACTTTTTCAGAATTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTTCAAGAACTTTGTTTGATCCAAGAAATAATTCGTGAATACTCATCGTATGAGAATGCATTATTGAGTCAAATGACATTAAGCATGCAGACAAAATTCAACAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTCTGTAGTTCTTGACCCTAGGTACAAGCTAGCTTATGTGATAATTATTGTTTTAATGAATTTTTGGAGGAAGATTGTGCAAAAATATGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGTCTTTCAAAGTCAAAGTGAAATACCTTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTACTGTTCATGATAGATTTAAACAAAGTAACAAAACATGTCTAGATGATGTTAAAACAGAGGTGACTCGTTATCTGGATAAGGCTCGTATAGATTGTATGGCCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGACAAGTAGCTAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCTGCCTTTAGCACTGAAGGATGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGACTGAAGAAATTGATGAAGGTAATATTCTTTTTGAAGTACGCATTTAAAATTTTCAATTATCCCATATAAGCTAACTGTTTGTCATTTTGATCTAGAATTCATAAACATAGAAAAGGAGATGGAAGCTGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTAAAATTGTTAACTTGTTAAATATCGAATCTTTTTTTTTTAGAGTCTTGAAGCTCAGTGATGGAAGCACTTTGGGTTATACGAACAAGGTG

mRNA sequence

CTTCTTCTTCTTCCTCTCCTACTTCTTCTTCTTCTTCCTCTCCTACTTCTTCTTCTTCTTCTTTCTTTTTTCATCCGACTTTCAGTGCGACATGTTCGTCGGCAACTCTTTCAGGCCACCGCGTTCATCGAACACCCAATCAATAGATCCCTCTTACTTTCCCCAATTTCAGGATGACTTCATTCTCGGTAGACGAGACTTCAAATCAGAGTTGTTCTAGTCCAGTGTTAGGAAAAAGAAAATCGGTTAAACCACCATCATCGGTATGAGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATCCTAGGGCCGCTTGTAAACATTGTGGGGCTTCATATGCTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATTTAGAGAAATGTAAGATGTATGTAAATCCATTGAAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTGATGGCTACATCATTCACTCAAGAAAATTGTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAAGTGAAGGGTTTCACCAATTTTGTCGGACATTAAATCCAAAGTTTGTGAATTCCTCTCGATTTAAGATCATTAGACAAGTAGCTAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCTGCCTTTAGCACTGAAGGATGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGACTGAAGAAATTGATGAAGAATTCATAAACATAGAAAAGGAGATGGAAGCTGCATTTGAGAATTTGAATAATGACTCTATGCTCAGTGATGGAAGCACTTTGGGTTATACGAACAAGGTG

Coding sequence (CDS)

ATGTATGTAAATCCATTGAAAGATAATGTTGAAGGAGAGGGAGATTCTGAAAGTAGTTTGATGGCTACATCATTCACTCAAGAAAATTGTAGAAAAATGCTTGCTAGGATGGTTATCTTGGATGAATTGCCATTTAAGTTCGTAGAAAGTGAAGGGTTTCACCAATTTTGTCGGACATTAAATCCAAAGTTTGTGAATTCCTCTCGATTTAAGATCATTAGACAAGTAGCTAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCTGAGTCTGCCTTTAGCACTGAAGGATGGGTGTTAGATTCTTTTCGAAGTTCTTTAACTCCTCAAACTGCAGAGGCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGACTGAAGAAATTGATGAAGAATTCATAAACATAGAAAAGGAGATGGAAGCTGCATTTGAGAATTTGAATAATGACTCTATGCTCAGTGATGGAAGCACTTTGGGTTATACGAACAAGGTG

Protein sequence

MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKFVESEGFHQFCRTLNPKFVNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSMLSDGSTLGYTNKV

Homology

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BLAST of MELO3C033898.jh1 vs. NCBI nr
Match: KAA0068144.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (620), Expect = 4.65e-79
Identity = 140/186 (75.27%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF----VESEGFHQF 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE PFK     V++   +  
Sbjct: 1   MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFPFKLFTVTVDNASSNDV 60

Query: 61  CRT-LNPKF----------------VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGW 120
               L  KF                VNSSRFKII QVARDIYSIPISTVP ESAFST G 
Sbjct: 61  AIAYLVKKFKARNGLVLDDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFESAFSTGGR 120

Query: 121 VLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENL 165
           VLDSFRSSLTPQTAEALICA NWIQSKPLDDMTEEIDG EEIDEEFINI KEMEAAFENL
Sbjct: 121 VLDSFRSSLTPQTAEALICAQNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENL 180

[Close]

BLAST of MELO3C033898.jh1 vs. NCBI nr
Match: TYK21064.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 1.54e-77
Identity = 139/186 (74.73%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF----VESEGFHQF 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE PFK     V++   +  
Sbjct: 1   MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFPFKLFTVTVDNASSNDV 60

Query: 61  CRT-LNPKF----------------VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGW 120
               L  KF                VNSSRFKII QVARDIYSIPISTVP ESAFST G 
Sbjct: 61  AIAYLVKKFKARNGLVLDDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFESAFSTGGR 120

Query: 121 VLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENL 165
           VLDSFRSSLTPQTAEALICA NWIQSK LDDMTEEIDG EEIDEEFINI KEMEAAFENL
Sbjct: 121 VLDSFRSSLTPQTAEALICAQNWIQSKLLDDMTEEIDGAEEIDEEFINIGKEMEAAFENL 180

[Close]

BLAST of MELO3C033898.jh1 vs. NCBI nr
Match: KAA0034838.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (578), Expect = 4.87e-68
Identity = 133/210 (63.33%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF------------- 60
           MYVNPL+DNVEG+G SE+SLMA SFTQENCRKMLARMVILDELPFK              
Sbjct: 362 MYVNPLEDNVEGDGGSETSLMAASFTQENCRKMLARMVILDELPFKLFTVTVDNASSNDV 421

Query: 61  ----------------VESEGFHQFCRTLNPKF----------------VNSSRFKIIRQ 120
                           ++ +   +  R L+                   VNSSRFKII Q
Sbjct: 422 AIAYLVKKFKGRNGLVLDDDAKTEVTRYLDEARIDCIGDEYLNLLTWWKVNSSRFKIISQ 481

Query: 121 VARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEI 165
           VARDIY IPISTVPS+SAFST G VLDSFRSSLTPQTAEALICA NWIQSKPLDDMTEEI
Sbjct: 482 VARDIYGIPISTVPSKSAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQSKPLDDMTEEI 541

[Close]

BLAST of MELO3C033898.jh1 vs. NCBI nr
Match: KAA0055978.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 2.35e-61
Identity = 126/210 (60.00%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF------------- 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE  FK              
Sbjct: 78  MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFLFKLFTITVDNASSNDA 137

Query: 61  ----------------VESEGFHQFCRTLNPKF----------------VNSSRFKIIRQ 120
                           ++ +   +  R L+                   VNSSRFKII Q
Sbjct: 138 AIAYLVKKFKGRNELVLDDDAKTEVARYLDEARIDCMSDEYLDLLTWWKVNSSRFKIISQ 197

Query: 121 VARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEI 165
           VA+DIYSI ISTVPSESAFST G VLDSFRSSLT Q A+ALICA NWIQSKPL+DM EEI
Sbjct: 198 VAKDIYSITISTVPSESAFSTGGRVLDSFRSSLTFQIAQALICAQNWIQSKPLNDMIEEI 257

[Close]

BLAST of MELO3C033898.jh1 vs. NCBI nr
Match: TYK26632.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 1.47e-59
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 65  VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 124
           VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ
Sbjct: 111 VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 170

Query: 125 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSML 165
           SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSM+
Sbjct: 171 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSMV 211

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-08
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 68  SRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWI 124
           + + I+ Q+ARD+ +I +STV SESAFS  G V+D +R+ L  +  EALIC  +W+
Sbjct: 665 AEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 65  VNSSRFKIIRQVARDIYSIPISTVPSE----SAFSTEGWVLDSFRSSLTPQTAEALICAH 124
           +N+ +F  + ++ARD+ +IP+S V S     SA +T   +LD +RSSL P+T EAL CA 
Sbjct: 671 LNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVEALFCAK 730

Query: 125 NWIQSKP 128
           +W+Q  P
Sbjct: 731 DWLQYPP 737

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-07
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 65  VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGW---VLDSFRSSLTPQTAEALICAHN 124
           +N+ +F  + ++ARDI +IP+S V S ++  + G    +LD +RSSL P+  EAL+CA +
Sbjct: 641 LNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALVCAKD 700

Query: 125 WIQSKP 128
           W+Q  P
Sbjct: 701 WLQYLP 706

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-07
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 68  SRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKP 127
           + + I+ Q+ARD+ +I +STV SESAFS  G V+D +R+ L  +  EALIC  +W+ +  
Sbjct: 696 AEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWVAASR 755

Query: 128 -----LDDMTEEIDGTEEIDEEFINIEKEM---EAAFENLNNDSMLSDGST 171
                   M  +++  + +     N E  M   E A E   N+  ++ GS+
Sbjct: 756 KGATYFPTMIGDLEVLDSVIAAATNHENHMDEDEDAIEFSKNNEDVASGSS 806

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 66  NSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWI 124
           N  ++  + ++ARDI SIP+S    +  F  E   +D +++SL P+T EALICA  W+
Sbjct: 617 NKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VL49 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001090 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.25e-79
Identity = 140/186 (75.27%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF----VESEGFHQF 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE PFK     V++   +  
Sbjct: 1   MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFPFKLFTVTVDNASSNDV 60

Query: 61  CRT-LNPKF----------------VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGW 120
               L  KF                VNSSRFKII QVARDIYSIPISTVP ESAFST G 
Sbjct: 61  AIAYLVKKFKARNGLVLDDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFESAFSTGGR 120

Query: 121 VLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENL 165
           VLDSFRSSLTPQTAEALICA NWIQSKPLDDMTEEIDG EEIDEEFINI KEMEAAFENL
Sbjct: 121 VLDSFRSSLTPQTAEALICAQNWIQSKPLDDMTEEIDGAEEIDEEFINIGKEMEAAFENL 180

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DBV5 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00260 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 7.48e-78
Identity = 139/186 (74.73%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF----VESEGFHQF 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE PFK     V++   +  
Sbjct: 1   MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFPFKLFTVTVDNASSNDV 60

Query: 61  CRT-LNPKF----------------VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGW 120
               L  KF                VNSSRFKII QVARDIYSIPISTVP ESAFST G 
Sbjct: 61  AIAYLVKKFKARNGLVLDDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFESAFSTGGR 120

Query: 121 VLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENL 165
           VLDSFRSSLTPQTAEALICA NWIQSK LDDMTEEIDG EEIDEEFINI KEMEAAFENL
Sbjct: 121 VLDSFRSSLTPQTAEALICAQNWIQSKLLDDMTEEIDGAEEIDEEFINIGKEMEAAFENL 180

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SW63 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00810 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 2.36e-68
Identity = 133/210 (63.33%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF------------- 60
           MYVNPL+DNVEG+G SE+SLMA SFTQENCRKMLARMVILDELPFK              
Sbjct: 362 MYVNPLEDNVEGDGGSETSLMAASFTQENCRKMLARMVILDELPFKLFTVTVDNASSNDV 421

Query: 61  ----------------VESEGFHQFCRTLNPKF----------------VNSSRFKIIRQ 120
                           ++ +   +  R L+                   VNSSRFKII Q
Sbjct: 422 AIAYLVKKFKGRNGLVLDDDAKTEVTRYLDEARIDCIGDEYLNLLTWWKVNSSRFKIISQ 481

Query: 121 VARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEI 165
           VARDIY IPISTVPS+SAFST G VLDSFRSSLTPQTAEALICA NWIQSKPLDDMTEEI
Sbjct: 482 VARDIYGIPISTVPSKSAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQSKPLDDMTEEI 541

[Close]

BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ULM2 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001150 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 1.14e-61
Identity = 126/210 (60.00%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 1   MYVNPLKDNVEGEGDSESSLMATSFTQENCRKMLARMVILDELPFKF------------- 60
           MYVNPL+DNVEGEGDSESSLMA SFTQENCRKMLARMVILDE  FK              
Sbjct: 78  MYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMVILDEFLFKLFTITVDNASSNDA 137

Query: 61  ----------------VESEGFHQFCRTLNPKF----------------VNSSRFKIIRQ 120
                           ++ +   +  R L+                   VNSSRFKII Q
Sbjct: 138 AIAYLVKKFKGRNELVLDDDAKTEVARYLDEARIDCMSDEYLDLLTWWKVNSSRFKIISQ 197

Query: 121 VARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQSKPLDDMTEEI 165
           VA+DIYSI ISTVPSESAFST G VLDSFRSSLT Q A+ALICA NWIQSKPL+DM EEI
Sbjct: 198 VAKDIYSITISTVPSESAFSTGGRVLDSFRSSLTFQIAQALICAQNWIQSKPLNDMIEEI 257

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BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DT32 (Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002780 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 7.12e-60
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 65  VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 124
           VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ
Sbjct: 111 VNSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWIQ 170

Query: 125 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSML 165
           SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSM+
Sbjct: 171 SKPLDDMTEEIDGTEEIDEEFINIEKEMEAAFENLNNDSMV 211

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BLAST of MELO3C033898.jh1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 66  NSSRFKIIRQVARDIYSIPISTVPSESAFSTEGWVLDSFRSSLTPQTAEALICAHNWI 124
           N  ++  + ++ARDI SIP+S    +  F  E   +D +++SL P+T EALICA  W+
Sbjct: 617 NKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

HSP 2 Score: 39.7 bits (91), Expect = 2.9e-03
Identity = 14/41 (34.15%), Postives = 26/41 (63.41%), Query Frame = 0


Query: 24  SFTQENCRKMLARMVILDELPFKFVESEGFHQFCRTLNPKF 65
           +F Q+ CR+ +A+M+I+ + P   V+  GF  F +++ P F
Sbjct: 159 AFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHF 199

The following BLAST results are available for this feature:

BLAST of MELO3C033898.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068144.1	4.65e-79	75.27	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
TYK21064.1	1.54e-77	74.73	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]
KAA0034838.1	4.87e-68	63.33	putative transposase [Cucumis melo var. makuwa]	[more]
KAA0055978.1	2.35e-61	60.00	putative transposase [Cucumis melo var. makuwa]	[more]
TYK26632.1	1.47e-59	99.01	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis...	[more]

BLAST of MELO3C033898.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P03010	6.6e-08	46.43	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q75HY5	1.1e-07	43.28	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	5.6e-07	40.91	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
P08770	5.6e-07	32.43	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
Q9M2N5	1.6e-06	39.66	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]

BLAST of MELO3C033898.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VL49	2.25e-79	75.27	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5D3DBV5	7.48e-78	74.73	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A5A7SW63	2.36e-68	63.33	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213...	[more]
A0A5A7ULM2	1.14e-61	60.00	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319...	[more]
A0A5D3DT32	7.12e-60	99.01	Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]

BLAST of MELO3C033898.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.2e-07	39.66	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 65..123 e-value: 4.4E-17 score: 61.7
None	No IPR available	PANTHER	PTHR23272:SF15	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1	coord: 19..68 coord: 65..131
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 65..131
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 19..68
None	No IPR available	SUPERFAMILY	140996	Hermes dimerisation domain	coord: 23..69
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 66..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033898.jh1.t1	MELO3C033898.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity