MELO3C033881 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033881
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DUF4218 domain-containing protein
Location	chr09: 11317475 .. 11318707 (-)
RNA-Seq Expression	MELO3C033881
Synteny	MELO3C033881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATTTTCATGACAGATTAGGTACTAATGGACTGTAGTAGTGATGACCACCTCTTAGTTGGAGGCAACAAGGATGTATCCCAGGTTGATAGTATTTTAGAGATATCTAGTCAAAGGAGTGTGCATGGTCCTACCACGATGATTCATTTGACACAAATTAGCTCTGATGTATATAGTTAAGGTATGAATACTTAAATTCTAAATAAATGATAACATGCATTTGGTTTAAATATTTGTTTTTATTTTAACATGTATTTTGAATATTTGTGTGTGTATAATGTGCTCAATAAATGAGCAGTACAGAATGTGGGTACTATGTGATAAAGTTCATGCAAGACATAATAAGGCAAAAAAGTGTCACAATTATAGATGTATGCATTTTCTTGCACAATCTCTTAGAGCTATTATTCTTACACTTAGTACAATCTAGTTATTAAATTACATTTATTTCGTTTCAGCTGATGAGACAAGTACCTTATACTCAATCTAAATTGGATGTGGTGAGAGTGGAATACTGTGACTTTCTAGGACGCTACATATGATACGTGATATGATGTCAATTTTTGTAGGGTTGTCTTATATGATCCTATTTGTTAGATATTGTTTTTGTAGAAACATTGGTTTACATTTAATTAATGAAAATTAATTAGTTTATTCGATGGATGTCTAGTAATTTTATGAAATATATGTTACTTGCGTTTCATTTATATAGTCTATTTGTATGAATTTTATATTTATGATTGTTGATATTTTTTATGATTTGGAGTTGTGGCAGAGTTCTACAGGTTATGTAGTTGACGTGAATTTGCAGGAGTTGTTTGAACTAGTTTGTAGTTGTATGTAATAGATTTTGCATAAGTTGTGAAGTTAGAAGTCTCGAGTTTTTGGAGTTCTGGATGTGTGAGTTTTGTAGTTTTGGAGTTGTGGCAGAGTTCTGCAGGTTATGTAGTTGACATGAATTTGAAGGGCTTGTTTTAACTAGTTTGTAGTTGTATGTAATAGATTTTACATAAGTTGTGAAGTTAGAAGTTTCGAGTTGTTGGAGTTCTGAAGTTGTGTGAGTTCTGTAGTTTTAGAGTTGAGGCGGAGTTCTACAGGTTATGTAGTTGACACAAATTTGCAGGAGTTGTTTGAACTAGTTTGTAGTTGTATGTAATGAATTTTGCATATTTTTCAGGTTTTGGTATTTTCAGGTTTTTTTATATTCACTACAAGAAATCTGGCCTTTAA

mRNA sequence

ATGTTTATTTTCATGACAGATTAGGTACTAATGGACTGTAGTAGTGATGACCACCTCTTAGTTGGAGGCAACAAGGATGTATCCCAGGTTGATAGTATTTTAGAGATATCTAGTCAAAGGAGTGTGCATGGTCCTACCACGATGATTCATTTGACACAAATTAGCTCTGATCTGATGAGACAAGTACCTTATACTCAATCTAAATTGGATGTGAGTTCTACAGGTTATGTAGTTGACGTGAATTTGCAGGAGTTGTTTGAACTAAAGTTTCGAGTTGTTGGAGTTCTGAAGTTGTGTGAGTTCTGTAGTTTTAGAGTTGAGGCGGAGTTCTACAGGTTTTTTTATATTCACTACAAGAAATCTGGCCTTTAA

Coding sequence (CDS)

ATGGACTGTAGTAGTGATGACCACCTCTTAGTTGGAGGCAACAAGGATGTATCCCAGGTTGATAGTATTTTAGAGATATCTAGTCAAAGGAGTGTGCATGGTCCTACCACGATGATTCATTTGACACAAATTAGCTCTGATCTGATGAGACAAGTACCTTATACTCAATCTAAATTGGATGTGAGTTCTACAGGTTATGTAGTTGACGTGAATTTGCAGGAGTTGTTTGAACTAAAGTTTCGAGTTGTTGGAGTTCTGAAGTTGTGTGAGTTCTGTAGTTTTAGAGTTGAGGCGGAGTTCTACAGGTTTTTTTATATTCACTACAAGAAATCTGGCCTTTAA

Protein sequence

MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQVPYTQSKLDVSSTGYVVDVNLQELFELKFRVVGVLKLCEFCSFRVEAEFYRFFYIHYKKSGL

Homology

[Close]

BLAST of MELO3C033881 vs. NCBI nr
Match: TYK10636.1 (uncharacterized protein E5676_scaffold315G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. NCBI nr
Match: KAA0040896.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           MDC SDDHL VG ++DV+ VD  LE SSQRS+ GPTTMIHLTQISSD  R V
Sbjct: 450 MDCCSDDHLSVGVDEDVAHVDCFLETSSQRSMCGPTTMIHLTQISSDANRLV 501

[Close]

BLAST of MELO3C033881 vs. NCBI nr
Match: KAA0041982.1 (uncharacterized protein E6C27_scaffold67G004190 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. NCBI nr
Match: TYK17918.1 (uncharacterized protein E5676_scaffold306G002090 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. NCBI nr
Match: TYK24359.1 (uncharacterized protein E5676_scaffold205G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-08
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 1  MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSD 48
          MDC SDD+L VG ++D++QVD  L+ SSQRS+ GPTTMIHLTQISSD
Sbjct: 14 MDCCSDDNLSVGADEDIAQVDCFLKTSSQRSMCGPTTMIHLTQISSD 60

[Close]

BLAST of MELO3C033881 vs. ExPASy TrEMBL
Match: A0A5D3CJP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001190 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. ExPASy TrEMBL
Match: A0A5A7TFT2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           MDC SDDHL VG ++DV+ VD  LE SSQRS+ GPTTMIHLTQISSD  R V
Sbjct: 450 MDCCSDDHLSVGVDEDVAHVDCFLETSSQRSMCGPTTMIHLTQISSDANRLV 501

[Close]

BLAST of MELO3C033881 vs. ExPASy TrEMBL
Match: A0A5D3D2X4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002090 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. ExPASy TrEMBL
Match: A0A5A7TEX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004190 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 1   MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSDLMRQV 53
           +DC SDDHL VG ++DV+QVD  LE SSQ+S+ GPTTMIHL QISSD  R V
Sbjct: 142 LDCCSDDHLSVGADEDVAQVDCFLETSSQKSMRGPTTMIHLAQISSDANRLV 193

[Close]

BLAST of MELO3C033881 vs. ExPASy TrEMBL
Match: A0A5D3DM41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001410 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 1  MDCSSDDHLLVGGNKDVSQVDSILEISSQRSVHGPTTMIHLTQISSD 48
          MDC SDD+L VG ++D++QVD  L+ SSQRS+ GPTTMIHLTQISSD
Sbjct: 14 MDCCSDDNLSVGADEDIAQVDCFLKTSSQRSMCGPTTMIHLTQISSD 60

The following BLAST results are available for this feature:

BLAST of MELO3C033881 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10636.1	4.8e-09	67.31	uncharacterized protein E5676_scaffold315G001190 [Cucumis melo var. makuwa]	[more]
KAA0040896.1	4.8e-09	71.15	transposase [Cucumis melo var. makuwa]	[more]
KAA0041982.1	4.8e-09	67.31	uncharacterized protein E6C27_scaffold67G004190 [Cucumis melo var. makuwa]	[more]
TYK17918.1	4.8e-09	67.31	uncharacterized protein E5676_scaffold306G002090 [Cucumis melo var. makuwa]	[more]
TYK24359.1	3.1e-08	70.21	uncharacterized protein E5676_scaffold205G001410 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033881 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJP2	2.3e-09	67.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TFT2	2.3e-09	71.15	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE...	[more]
A0A5D3D2X4	2.3e-09	67.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TEX5	2.3e-09	67.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DM41	1.5e-08	70.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C033881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033881.1	MELO3C033881.1	mRNA