MELO3C033855.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033855.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr09: 9540222 .. 9541374 (-)
RNA-Seq ExpressionMELO3C033855.jh1
SyntenyMELO3C033855.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGAAGATAGATATAAAATATTCCGATACTCTGAAATATCTTATCATCATTGGCTGCCATCTTCCTCCGTTTCAGTCGGAAGGAGGAAGCAGAAGGCTGAGCTCCACCATCCACGGCGGAGGAACAACAAAGGCAGGTCTGAAAAAACTCATAAGAAGAAGAATGAATCGTACTACGAACATCGAACATGAGAAGATCGTCCATGGAGGAAGAAGTACTCCAACTAGGGTCCTCATGAAACATCGCTTCACACCGATCCTCCTCGCCGATGTAAGGGGGATATTCAATTTTCTTAAGTATATTGTAGATCTGGCTCGCCGATGTAGTAAAGTGCAAAAAACATCATATATCTGCAACAGCTAATTAACTCTTCTGCAACAGATCTGGCCACAACCCAACCAGATCGGAGCTTGTGAGATAAACGCAGACGGCGACGGTGGTGGCGAGGGCTGGACATGAACATGGTTGAAGAAAAGGACTCCCGACAGTGGTGGCAAGCATAAGAGTGTTTGAAGAACGTGAGGAGTGACGAAGGTGGTGGCGGGCACGGGCTGGGCACGAGGGACGATGGTGGTGGTGATGGCAGCGACTGTTCAGAGAAGAAAGGGAAGATTGTTAGATGAGAATGAGGAGTGAAGAAGAAATTGGAAGGATGAAATCGTGTGGGTGATTGAGAAAGAGTAAAGTAAGAGAGAGAAAGTCATTTTTTTATAAAATAAAAAATTAAAAAAATTAAAATTAAAAAGGAGCTTTAATATCGCTTTTCAAAACAAGGATGTTTAATGTCGGTTTTAAACCGACATTAAAGCTCCAGCTTTAATGTCGGCTTAAAACCGACATTAAACATCCGCCTTTTCAAAAACGACATTAAAGCTCTTTTTTCATTTTTTCCAACCGACATTAAAGGCCAGATTTGTTCTAGTGGTTTATGATTTCATTTGAAACATATCTAACTTTAACTAATCTAATGTGTTATGTTTGTAATGTGTAGCAATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTTCGGGCCGACTATCACAGACATTTCAAAACTACTGCGACCCAGAGGAGGCTCGTGCCAATCCACCAAACACATTGA

mRNA sequence

ATGGAAAAGAAGATAGATATAAAATATTCCGATACTCTGAAATATCTTATCATCATTGGCTGCCATCTTCCTCCGTTTCAGTCGGAAGGAGGAAGCAGAAGGCTGAGCTCCACCATCCACGGCGGAGGAACAACAAAGGCAGGTCTGAAAAAACTCATAAGAAGAAGAATGAATCGTACTACGAACATCGAACATGAGAAGATCGTCCATGGAGGAAGAAGTACTCCAACTAGGGTCCTCATGAAACATCGCTTCACACCGATCCTCCTCGCCGATATCTGGCTCGCCGATGTACAATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTTCGGGCCGACTATCACAGACATTTCAAAACTACTGCGACCCAGAGGAGGCTCGTGCCAATCCACCAAACACATTGA

Coding sequence (CDS)

ATGGAAAAGAAGATAGATATAAAATATTCCGATACTCTGAAATATCTTATCATCATTGGCTGCCATCTTCCTCCGTTTCAGTCGGAAGGAGGAAGCAGAAGGCTGAGCTCCACCATCCACGGCGGAGGAACAACAAAGGCAGGTCTGAAAAAACTCATAAGAAGAAGAATGAATCGTACTACGAACATCGAACATGAGAAGATCGTCCATGGAGGAAGAAGTACTCCAACTAGGGTCCTCATGAAACATCGCTTCACACCGATCCTCCTCGCCGATATCTGGCTCGCCGATGTACAATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTTCGGGCCGACTATCACAGACATTTCAAAACTACTGCGACCCAGAGGAGGCTCGTGCCAATCCACCAAACACATTGA

Protein sequence

MEKKIDIKYSDTLKYLIIIGCHLPPFQSEGGSRRLSSTIHGGGTTKAGLKKLIRRRMNRTTNIEHEKIVHGGRSTPTRVLMKHRFTPILLADIWLADVQLFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH
Homology
[Close]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match: KAA0058868.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK23753.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.30e-16
Identity = 44/55 (80.00%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
           AD+Q  FVLDFNDQAMNRFVEHQML TFKEF  DYHRHFK  AT RRLVP HQT+
Sbjct: 152 ADLQWFFVLDFNDQAMNRFVEHQMLSTFKEFWGDYHRHFKMYATPRRLVPTHQTY 206

[Close]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match: KAA0046250.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 2.22e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD+    K+TATQRRLVP HQTH
Sbjct: 112 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADFIDISKSTATQRRLVPTHQTH 166

[Close]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match: KAA0046162.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK00192.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 6.48e-15
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 99  QLFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
           QLFVLDFNDQAMN+FVEHQMLMTFKEF ADY+RHFK  +   RLVP +Q H
Sbjct: 96  QLFVLDFNDQAMNKFVEHQMLMTFKEFWADYYRHFKKYSDSERLVPTYQMH 146

[Close]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match: KAA0044973.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.06e-14
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD HRHFK  +    +VP HQTH
Sbjct: 112 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEVVPTHQTH 166

[Close]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match: KAA0055453.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08935.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 1.79e-14
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD HRHFK       +VP HQTH
Sbjct: 188 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYTDPEEVVPTHQTH 242

[Close]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UUI4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00720 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.30e-17
Identity = 44/55 (80.00%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
           AD+Q  FVLDFNDQAMNRFVEHQML TFKEF  DYHRHFK  AT RRLVP HQT+
Sbjct: 152 ADLQWFFVLDFNDQAMNRFVEHQMLSTFKEFWGDYHRHFKMYATPRRLVPTHQTY 206

[Close]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TSX8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00490 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.07e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD+    K+TATQRRLVP HQTH
Sbjct: 112 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADFIDISKSTATQRRLVPTHQTH 166

[Close]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BN89 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1333G00020 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.14e-15
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 99  QLFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
           QLFVLDFNDQAMN+FVEHQMLMTFKEF ADY+RHFK  +   RLVP +Q H
Sbjct: 96  QLFVLDFNDQAMNKFVEHQMLMTFKEFWADYYRHFKKYSDSERLVPTYQMH 146

[Close]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TN85 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002810 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.12e-15
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD HRHFK  +    +VP HQTH
Sbjct: 112 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEVVPTHQTH 166

[Close]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UHP1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00230 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.66e-15
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 96  ADVQ-LFVLDFNDQAMNRFVEHQMLMTFKEFRADYHRHFKTTATQRRLVPIHQTH 149
            D+Q LFVLDFNDQAMNRFVEHQML TFKEFRAD HRHFK       +VP HQTH
Sbjct: 188 GDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYTDPEEVVPTHQTH 242

The following BLAST results are available for this feature:
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058868.11.30e-1680.00CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK23753.1 CACTA en-... [more]
KAA0046250.12.22e-1580.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0046162.16.48e-1576.47NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK00192.1 NBS-LRR t... [more]
KAA0044973.11.06e-1474.55CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0055453.11.79e-1474.55CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08935.1 CACTA en-... [more]
BLAST of MELO3C033855.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UUI46.30e-1780.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TSX81.07e-1580.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BN893.14e-1576.47NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TN855.12e-1574.55CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UHP18.66e-1574.55CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C033855.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033855.jh1.t1MELO3C033855.jh1.t1mRNA