MELO3C033841 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033841
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Reverse transcriptase
Location	chr09: 8544467 .. 8549392 (-)
RNA-Seq Expression	MELO3C033841
Synteny	MELO3C033841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAATCGCAGAAAAAAAAGAAGAGGAAATAAGAAAGACGATGAAAAAAATCGTAGGAGGAAGATGAGTTTGCATAAGATCGGGAGCCAGCCAGTTCAAGCACAAGCATTCGGGAGCCAGCCGCAGTAGAAGCCGAACCACTCGAGTCACCCTTCGTGATCCGCAGCCGTTCCGTTCGTAGCCGCCGCGTGAAACGTCGTCCGCCGCATCGTCGAGCAGCAGCGACCGTCGGTCGTCAGCCGCACGTTTCCATCCGTCGGAAACCCGAACCCGCGCTTCGGCCGTCGCCCGAACCCGAAGCCGAAACCGCGTCCGCTCACCGCTCCGTGCCCGCGCGCCGCCCCGAGTCGCAAACCGAGCCCGCGCGCGCCCAGCTCTCTCCGCGTGCAAGCCGCGCCGCCTACACCACAAGCTGAGCCGCGCCTCCCTTCTGTCGCAAGCCGAGCTGCACGCGCACAGTTTCTGCGTCGAGCCGAGCCGAGCCGCGCCTGCGCCAAGCCGAGCCGGTCCCTGTTCTTTTTCCAGCCGAGCCGCCAAGCCTAATTTGGCTCCTTCCATCTAATTTTTGGTAATTAAATTAATTATTTTGGCATTTCCCAGTAAGACTCAATGTTTTTGGACACTAAATAATTTAATTTGGAATTAAATTAAATTATTTTCCTTAAGGGACGTCTTGGACCAAGTAACTGCTGCAGCGTGGGATTTCTTCAGTAGGGGCTCAGCATTGCAACCTCTTCCTAGGGTAAGTCATTTCAACTAAATTTTGAACCGTTAGTCGTGGGTGACTTAATTACGAATTTTGGCGTATTAAACAGTTAGGACCTCGTTGCTTGGAAAGCACGCTTGCCTCGCGGTTAGAACTCGCCAAGTAAATCTCCAGGTAAGAGATTTCTACTACTAGCTCCATGTTTAGAATTATGAGGTCACATATACCCTCAATTGTGCATGTTGAGGACTAGACTGTACGATGCATGAAATTAATGATAGTATGATGCGATTGATGATACGGTTATATTATAGCATGATGTTGTGATGACAAGAACTGTTATGGCTGTACGACGGTGTCGAGATGGAGAGTGTAATGATGATTTATCTGTTATGTTATATGATGATGCCATGTGTATGTATACTGCGATTAGGGTACCTGTTAGCCTAACCTTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGTGCGGTCCGATGGGACACCAGTCTAGCATGGATATAGATATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGATTGTCCTAGGTGTCCCCGGGGCACCGAAGACTAGAGTTACGTTCCTACGAGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTACAGGACTCTAAGAGGAAGCTAACAGGCACCTAGTGGGACTAGTAGTGAGTCCCTTGCTGAGTATTTTATTCTCACTCTTTTCATGTCATGTTTTTAGGTAGAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCAGAAGTGACTCTGGCGAGCCATAGGGGCTTCTGCTTCCGCTTATTCTTGTTTTTTACTTTAGTACCTGAGTTTGAGTATTTTTCACTATTTACCATTTTTTTTAAAGTAGATAGGGCCCGAGTAGGACTTTAGAACGAAATATCATTTTTGCATGTTACTTTGTTGGATGTTCATAAATAAATTTCTCAAACCTTATGCGTTTTTACTAAATTTTATGACTTAAACCACTTGCTCTACATTTAGTAATGACTTCGACTCAGTATAAGGAGTTGGGTCGTTACAGTTGGTATCAGAGCACAATGTTTTAGGTTCTGTAGACTGACCTACGATGTAAGTCATTGCTTTGTTTTGGTTTTACTTCACCCTATGGCTATACGGTCCTTCGGCACTCGCCAGGTATGTCTAAACCCTTGCTAATGTTAAGATTACAATTTTGCCTGAATAGACTAGACCTAGAGATAGGTGTGTTAAGTTCTTGTGGTGAAAGTTTTGTTGGTGAATTTTAGGGAGAATGTCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCAGTCGTGGCCAGCCGGAGGCGCAACCTGCTGCACCGGCGGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTCGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAAGCCAGACCGTCGTTTTTCCAGCCCCTGAGGAAGCTCAACCCGTGCCAGTTCAACTGTCGGCCGAGGCTAAAAACTTACGGGACTTTAGGAAGTATAATCCTAAGACCTTTGACGGATCCATGGACAACCCCACAAAGGCCCAAATGTTGTTGACGTCCATAGAGACTATCTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTTTTCTTCTTGGAGGATAGGGGCACCGCCTGGTGGGAGACTGCTGAGAGAATGCTGGGGGGCGACGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAACGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGATATGACGGTGGAGCAGTACGACGCCGAGTTCGACATGCTGTCCCGTTTTGCTCCCGATGTGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCCGAGCTCTCCGGCCAGCCACTCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCATGAGAGAGCTGATTCGTCTAAGGCTGCCGGTAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTGGAGACGCAGCCTGACGTAATACCGCAGCGAACTTTGAGGTCAGGAGGTGTCTTTCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCACTTGTACTACCTGTGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATGTGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCTTCCCAGCAGGGGAGAGTTTTTGCCACTACCCGGCAGGAGTCCGAGCGAGCTGGGACAGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTACTATTTGACTCTGGGTGATCCCACTCGTTTATATCCTCTGTTTTCGTTCAGCATGTGGGTTTGGAGGTAGAACCTTTGGGTAGTGTTTTGTCTGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCCTATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTTTGGGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGAGAATACCCTGACGTTTTCCCCGACGAACTCCCAGAACTTCTGCCTCCCAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACGAGAGCTGAACAAGGTGACAGTTAAAAACCGATACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCCGCTTATTCTTGTTTTTGACTTTAGTACCTGAGTTTGAGTATTTTTCACTATTTACCATTTTTTTTAAGTAGATAGGGCCCGAGTAGGACTTTAGAACGAAATATCATTTTTGCATGTTACTTTGTTGGATGTTCATAAATAAATTTCTCAAACCTTATGTGTTTTTACTAAATTTTATGACTTAAACCACTTGCTCTACATTTAGTAATGACTTCGACTTAGTATAAGAAGTTGGGTCGTTACAAACTTAGTCTTAATTCTGAGTGTATTATGAACTCCTGTTCACGAGGGATTGATCTTTGATTTGTACGGGTGAGAGTGGCCAAATTGCTGACTCAATATGCTTATTATTTTAGGGACAAGACCAAGTGGAAAGTTGGGAATATAATCACACAAGTGAAATTCACTTTTTCTCGTCTTTAGGGTAAGTAGATAAGTATTTCCCTAAATGGTGTCTCCGGGACTTAAACAAAGGGGGCGAGAGGGGTTTCTGTTTAGTGGTTGGACCATAAACATGTTGTTCATTAGAGGAGCACTGATATTTAAGGACTAGAAGTAACCCAAAGGTAAAACGGTAAATGACTAACTTACTAGTACTGATCTATATCCATGAACACAGAAATACATCTATAGTGAGAAGAGTTTAGTTGTGAGTCTTTAGTAGAGTGTACACACAATTAACAATTATTGATTAATGTGGTTAATGAGTTTAGCCAATTAATCTCATATCGTTGTAGTTTCTGATCTGTAGGTCCATTAGATCCCATTCCTAG

mRNA sequence

ATGGAAAGAAATCGCAGAAAAAAAAGAAGAGGAAATAAGAAAGACGATGAAAAAAATCGTAGGAGGAAGATGAGTTTGCATAAGATCGGGAGCCAGCCAGTTCAAGCACAAGCATTCGGGAGCCAGCCGCAGTAGAAGCCGAACCACTCGAGTCACCCTTCGTGATCCGCAGCCGTTCCGTTCGTAGCCGCCGCGTGAAACGTCGTCCGCCGCATCGTCGAGCAGCAGCGACCGTCGGTCGTCAGCCGCACGTTTCCATCCGTCGGAAACCCGAACCCGCGCTTCGGCCGTCGCCCGAACCCGAAGCCGAAACCGCGTCCGCTCACCGCTCCGTGCCCGCGCGCCGCCCCGAGTCGCAAACCGAGCCCGCGCGCGCCCAGCTCTCTCCGCGTGCAAGCCGCGCCGCCTACACCACAAGCTGAGCCGCGCCTCCCTTCTGTCGCAAGCCGAGCTGCACGCGCACAGTTTCTGCGTCGAGCCGAGCCGAGCCGCGCCTGCGCCAAGCCGAGCCGGGACGTCTTGGACCAAGTAACTGCTGCAGCGTGGGATTTCTTCAGTAGGGGCTCAGCATTGCAACCTCTTCCTAGGGTAATTAGGACCTCGTTGCTTGGAAAGCACGCTTGCCTCGCGGTTAGAACTCGCCAAGTAAATCTCCAGCATGATGTTGTGATGACAAGAACTGTTATGGCTGTACGACGGTGTCGAGATGGAGAGTGTAATGATGATTTATCTGTTATGTTATATGATGATGCCATGTGTATGTATACTGCGATTAGGGTACCTGTTAGCCTAACCTTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGTGCGGTCCGATGGGACACCAGTCTAGCATGGATATAGATATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGATTGTCCTAGGTGTCCCCGGGGCACCGAAGACTAGAGTTACGTTCCTACGAGAGCGCATGTTGCACAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCAGAAGTGACTCTGGCGAGCCATAGGGGCTTCTGCTTCCGCTTATTCTTGTTTTTTACTTTAACTGACCTACGATGTAAGTCATTGCTTTGTTTTGGTTTTACTTCACCCTATGGCTATACGGTCCTTCGGCACTCGCCAGGGAGAATGTCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCAGTCGTGGCCAGCCGGAGGCGCAACCTGCTGCACCGGCGGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTCGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAAGCCAGACCGTCGTTTTTCCAGCCCCTGAGGAAGCTCAACCCGTGCCAGTTCAACTGTCGGCCGAGGCTAAAAACTTACGGGACTTTAGGAAGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGGACAAGACCAAGTGGAAAGTTGGGAATATAATCACACAAGTGAAATTCACTTTTTCTCGTCTTTAGGGTCCATTAGATCCCATTCCTAG

Coding sequence (CDS)

ATGACAAGAACTGTTATGGCTGTACGACGGTGTCGAGATGGAGAGTGTAATGATGATTTATCTGTTATGTTATATGATGATGCCATGTGTATGTATACTGCGATTAGGGTACCTGTTAGCCTAACCTTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGTGCGGTCCGATGGGACACCAGTCTAGCATGGATATAGATATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGATTGTCCTAGGTGTCCCCGGGGCACCGAAGACTAGAGTTACGTTCCTACGAGAGCGCATGTTGCACAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCAGAAGTGACTCTGGCGAGCCATAGGGGCTTCTGCTTCCGCTTATTCTTGTTTTTTACTTTAACTGACCTACGATGTAAGTCATTGCTTTGTTTTGGTTTTACTTCACCCTATGGCTATACGGTCCTTCGGCACTCGCCAGGGAGAATGTCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCAGTCGTGGCCAGCCGGAGGCGCAACCTGCTGCACCGGCGGTCGACCCTAACGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTCGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAAGCCAGACCGTCGTTTTTCCAGCCCCTGAGGAAGCTCAACCCGTGCCAGTTCAACTGTCGGCCGAGGCTAAAAACTTACGGGACTTTAGGAAGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGGACAAGACCAAGTGGAAAGTTGGGAATATAATCACACAAGTGAAATTCACTTTTTCTCGTCTTTAGGGTCCATTAGATCCCATTCCTAG

Protein sequence

MTRTVMAVRRCRDGECNDDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSMDIDMTRVTRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGFCFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQPEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQARPSFFQPLRKLNPCQFNCRPRLKTYGTLGRSHCLFQDRPAGQDQVESWEYNHTSEIHFFSSLGSIRSHS

Homology

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BLAST of MELO3C033841 vs. NCBI nr
Match: KAA0056046.1 (uncharacterized protein E6C27_scaffold319G002100 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-46
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 113 QGQAGERPEVTLASHRGFCFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPR 172
           Q QAG RPEVT+ASHR FCF L  F   TDLRCKSL CFGFTSPYGYTVLRHSPGRMSPR
Sbjct: 103 QRQAGGRPEVTVASHRDFCFCLPRFRPFTDLRCKSLFCFGFTSPYGYTVLRHSPGRMSPR 162

Query: 173 RGARRGGGRGGRGASRGQPEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAA 232
           +GARRGGGR GRGA RGQPE QPA   VDPNAPVTQADL AMEQRYQDMLQAALAPFLAA
Sbjct: 163 KGARRGGGREGRGAGRGQPEEQPAVSTVDPNAPVTQADLPAMEQRYQDMLQAALAPFLAA 222

Query: 233 QQN 236
           QQN
Sbjct: 223 QQN 225

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BLAST of MELO3C033841 vs. NCBI nr
Match: KAA0054092.1 (uncharacterized protein E6C27_scaffold1371G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-45
Identity = 121/225 (53.78%), Postives = 142/225 (63.11%), Query Frame = 0


Query: 18  DDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSMDIDMTRV 77
           DD+  + +D  + M   + +P+    RVVPAWVSF ITTYL LCGP GHQSSMDIDMT+V
Sbjct: 170 DDMVTLWHD--IVMTRTVMIPI----RVVPAWVSFRITTYLRLCGPTGHQSSMDIDMTQV 229

Query: 78  TRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGFCFRLFLF 137
           TRRGPRIPIVL VP   + ++       + R R+   +A +  E                
Sbjct: 230 TRRGPRIPIVLSVPRDTEDQIYVPTGAHVARVRE---RARDWVE---------------- 289

Query: 138 FTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQPEAQPAA 197
               ++R K+               R +  RM P RGAR+GGGRGGRG  RGQPE QPAA
Sbjct: 290 ---AEVRAKA-------------SWRATRRRMPPHRGARQGGGRGGRGVGRGQPEEQPAA 349

Query: 198 PAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 243
           PAVDPNAPVTQADLAAME RYQDMLQA LAPFLAAQQNQAAP+QA
Sbjct: 350 PAVDPNAPVTQADLAAMEHRYQDMLQATLAPFLAAQQNQAAPIQA 353

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BLAST of MELO3C033841 vs. NCBI nr
Match: KAA0063946.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 6.7e-45
Identity = 121/205 (59.02%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 39  VSLTFRVVPAWVSFGITTYLGLCGPMGHQSSMDIDMTRVTRRGPRIPIVLGVPGAPKTRV 98
           V +  RVVPAWVSFGITTYLGLCGP GHQSSMDIDMTRVTRRGPRIPIVLGVPG      
Sbjct: 153 VMVPIRVVPAWVSFGITTYLGLCGPTGHQSSMDIDMTRVTRRGPRIPIVLGVPG------ 212

Query: 99  TFLRERMLHRTRQGQGQAGERPEVTLASHRGFCFRLFLFFTLTDLRCKSLLCFGFTSPYG 158
                                                      D+  +S +      P G
Sbjct: 213 -------------------------------------------DIEDQSYV------PTG 272

Query: 159 YTVLRHSPGRMSPRRGARRGGGRGGRGASRGQPEAQPAAPAVDPNAPVTQADLAAMEQRY 218
             V R    R+ PRRGA RGGGRGGRG   GQPE QPAAPAVD NAPVTQ DLAAMEQRY
Sbjct: 273 AHVARVRERRIPPRRGAGRGGGRGGRGVGCGQPEEQPAAPAVDLNAPVTQ-DLAAMEQRY 301

Query: 219 QDMLQAALAPFLAAQQNQAAPVQAR 244
           QDMLQAALAPFLAAQQNQAAPVQA+
Sbjct: 333 QDMLQAALAPFLAAQQNQAAPVQAQ 301

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BLAST of MELO3C033841 vs. NCBI nr
Match: KAA0066707.1 (hypothetical protein E6C27_scaffold271G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-34
Identity = 78/91 (85.71%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MTRTVMAVRRCRDGECNDDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGL 60
          MTRTV     CRDGECNDDLSVMLYDDAMCMYTAIRV V     VVPAWVSFGITTYLGL
Sbjct: 1  MTRTVWLYDGCRDGECNDDLSVMLYDDAMCMYTAIRVHV-----VVPAWVSFGITTYLGL 60

Query: 61 CGPMGHQSSMDIDMTRVTRRGPRIPIVLGVP 92
          CGP GHQSSMD+DMTRVTRRGPRIPIVLGVP
Sbjct: 61 CGPTGHQSSMDVDMTRVTRRGPRIPIVLGVP 86

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BLAST of MELO3C033841 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-34
Identity = 113/232 (48.71%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 11  CRDGECNDDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSM 70
           CRDGEC +DL  MLY DAMCMYTAIRVPVSL            + +YL  C P G     
Sbjct: 521 CRDGECRNDLCDMLYADAMCMYTAIRVPVSLIL----------LESYLHGC-PSGSPPIE 580

Query: 71  DIDMTRVTRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGF 130
           D  +                           R R   R  + + + G         HR +
Sbjct: 581 DCVVEDEA-----------------------RARASWRATRSETEEG---------HRDY 640

Query: 131 CFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQ 190
            FRLFL                               RM PRRG RRGGGRGGRGA RGQ
Sbjct: 641 RFRLFL------------------------------RRMPPRRGTRRGGGRGGRGAGRGQ 679

Query: 191 PEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 243
           PEA P APAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA
Sbjct: 701 PEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 679

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BLAST of MELO3C033841 vs. ExPASy TrEMBL
Match: A0A5A7UP21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002100 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.7e-47
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 113 QGQAGERPEVTLASHRGFCFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPR 172
           Q QAG RPEVT+ASHR FCF L  F   TDLRCKSL CFGFTSPYGYTVLRHSPGRMSPR
Sbjct: 103 QRQAGGRPEVTVASHRDFCFCLPRFRPFTDLRCKSLFCFGFTSPYGYTVLRHSPGRMSPR 162

Query: 173 RGARRGGGRGGRGASRGQPEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAA 232
           +GARRGGGR GRGA RGQPE QPA   VDPNAPVTQADL AMEQRYQDMLQAALAPFLAA
Sbjct: 163 KGARRGGGREGRGAGRGQPEEQPAVSTVDPNAPVTQADLPAMEQRYQDMLQAALAPFLAA 222

Query: 233 QQN 236
           QQN
Sbjct: 223 QQN 225

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BLAST of MELO3C033841 vs. ExPASy TrEMBL
Match: A0A5A7UE72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1371G00160 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 121/225 (53.78%), Postives = 142/225 (63.11%), Query Frame = 0


Query: 18  DDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSMDIDMTRV 77
           DD+  + +D  + M   + +P+    RVVPAWVSF ITTYL LCGP GHQSSMDIDMT+V
Sbjct: 170 DDMVTLWHD--IVMTRTVMIPI----RVVPAWVSFRITTYLRLCGPTGHQSSMDIDMTQV 229

Query: 78  TRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGFCFRLFLF 137
           TRRGPRIPIVL VP   + ++       + R R+   +A +  E                
Sbjct: 230 TRRGPRIPIVLSVPRDTEDQIYVPTGAHVARVRE---RARDWVE---------------- 289

Query: 138 FTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQPEAQPAA 197
               ++R K+               R +  RM P RGAR+GGGRGGRG  RGQPE QPAA
Sbjct: 290 ---AEVRAKA-------------SWRATRRRMPPHRGARQGGGRGGRGVGRGQPEEQPAA 349

Query: 198 PAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 243
           PAVDPNAPVTQADLAAME RYQDMLQA LAPFLAAQQNQAAP+QA
Sbjct: 350 PAVDPNAPVTQADLAAMEHRYQDMLQATLAPFLAAQQNQAAPIQA 353

[Close]

BLAST of MELO3C033841 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.2e-45
Identity = 121/205 (59.02%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 39  VSLTFRVVPAWVSFGITTYLGLCGPMGHQSSMDIDMTRVTRRGPRIPIVLGVPGAPKTRV 98
           V +  RVVPAWVSFGITTYLGLCGP GHQSSMDIDMTRVTRRGPRIPIVLGVPG      
Sbjct: 153 VMVPIRVVPAWVSFGITTYLGLCGPTGHQSSMDIDMTRVTRRGPRIPIVLGVPG------ 212

Query: 99  TFLRERMLHRTRQGQGQAGERPEVTLASHRGFCFRLFLFFTLTDLRCKSLLCFGFTSPYG 158
                                                      D+  +S +      P G
Sbjct: 213 -------------------------------------------DIEDQSYV------PTG 272

Query: 159 YTVLRHSPGRMSPRRGARRGGGRGGRGASRGQPEAQPAAPAVDPNAPVTQADLAAMEQRY 218
             V R    R+ PRRGA RGGGRGGRG   GQPE QPAAPAVD NAPVTQ DLAAMEQRY
Sbjct: 273 AHVARVRERRIPPRRGAGRGGGRGGRGVGCGQPEEQPAAPAVDLNAPVTQ-DLAAMEQRY 301

Query: 219 QDMLQAALAPFLAAQQNQAAPVQAR 244
           QDMLQAALAPFLAAQQNQAAPVQA+
Sbjct: 333 QDMLQAALAPFLAAQQNQAAPVQAQ 301

[Close]

BLAST of MELO3C033841 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.9e-35
Identity = 113/232 (48.71%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 11  CRDGECNDDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSM 70
           CRDGEC +DL  MLY DAMCMYTAIRVPVSL            + +YL  C P G     
Sbjct: 267 CRDGECRNDLCDMLYADAMCMYTAIRVPVSLIL----------LESYLHGC-PSGSPPIE 326

Query: 71  DIDMTRVTRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGF 130
           D  +                           R R   R  + + + G         HR +
Sbjct: 327 DCVVEDEA-----------------------RARASWRATRSETEEG---------HRDY 386

Query: 131 CFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQ 190
            FRLFL                               RM PRRG RRGGGRGGRGA RGQ
Sbjct: 387 RFRLFL------------------------------RRMPPRRGTRRGGGRGGRGAGRGQ 425

Query: 191 PEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 243
           PEA P APAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA
Sbjct: 447 PEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 425

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BLAST of MELO3C033841 vs. ExPASy TrEMBL
Match: A0A5D3DE92 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00210 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.9e-35
Identity = 113/232 (48.71%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 11  CRDGECNDDLSVMLYDDAMCMYTAIRVPVSLTFRVVPAWVSFGITTYLGLCGPMGHQSSM 70
           CRDGEC +DL  MLY DAMCMYTAIRVPVSL            + +YL  C P G     
Sbjct: 223 CRDGECRNDLCDMLYADAMCMYTAIRVPVSLIL----------LESYLHGC-PSGSPPIE 282

Query: 71  DIDMTRVTRRGPRIPIVLGVPGAPKTRVTFLRERMLHRTRQGQGQAGERPEVTLASHRGF 130
           D  +                           R R   R  + + + G         HR +
Sbjct: 283 DCVVEDEA-----------------------RARASWRATRSETEEG---------HRDY 342

Query: 131 CFRLFLFFTLTDLRCKSLLCFGFTSPYGYTVLRHSPGRMSPRRGARRGGGRGGRGASRGQ 190
            FRLFL                               RM PRRG RRGGGRGGRGA RGQ
Sbjct: 343 RFRLFL------------------------------RRMPPRRGTRRGGGRGGRGAGRGQ 381

Query: 191 PEAQPAAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 243
           PEA P APAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA
Sbjct: 403 PEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAPFLAAQQNQAAPVQA 381

The following BLAST results are available for this feature:

BLAST of MELO3C033841 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056046.1	1.6e-46	84.55	uncharacterized protein E6C27_scaffold319G002100 [Cucumis melo var. makuwa]	[more]
KAA0054092.1	2.3e-45	53.78	uncharacterized protein E6C27_scaffold1371G00160 [Cucumis melo var. makuwa]	[more]
KAA0063946.1	6.7e-45	59.02	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066707.1	1.4e-34	85.71	hypothetical protein E6C27_scaffold271G00400 [Cucumis melo var. makuwa]	[more]
KAA0033825.1	1.8e-34	48.71	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033841 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP21	7.7e-47	84.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UE72	1.1e-45	53.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VBY3	3.2e-45	59.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5D3DY07	8.9e-35	48.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]
A0A5D3DE92	8.9e-35	48.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83...	[more]

BLAST of MELO3C033841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033841.1	MELO3C033841.1	mRNA