MELO3C033756 (gene) Melon (DHL92) v4

Overview
NameMELO3C033756
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Locationchr05: 7674189 .. 7675696 (-)
RNA-Seq ExpressionMELO3C033756
SyntenyMELO3C033756
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTACTGTTATCAAGGACCTAATTAAGAACAAAATTTTTTTAGCTGGTTCTGAATTGTCAACTCCCAAAGATATAGTTCGTTACATTCGTGCTGAACATGGTTTAAGCATATTTTACCAAATAGCATGGCGTGCTCGTGAGGCTGCGTTGGATGAGATTCACGGATCTCCGGAGGACTCCTACAAGATGATACCCCAATTTGTATACATATTGAAACTCAACAAACCATGTATATTAGCAATATACTTAATAATTTATTTCATTAATTTTTCGTCATTATTTCCTTACCATGTTTTCGTCATATGTTTAAATTTTTTTATGTTCATAGGTTCTGTTGTTGAATACAAAGTTGATGCTGATGGTAGATTTCTTTACTTCTTTGTGGCATTATCTGCTACCATTTCTGGTTGGCAACATTGTTGTCCACTCATTTCTATTGATGGAACAAGTCTAAAAAATAAGTACGGTGGTACTCTGTTATTTACTTCAACACTTGATGCCAATTATCAAAATTTTCCACTAGCCTTTTGTGTCGTGGATTATAAGAATGATTCCTCATGGACCTAGTTTTGCAACCAATTGAAGAGAATTATAGGTGGTCAGAATGAGATTGTCATAGTATCTGATAGGCATTAAAGTATATGCAAATCCATAGAGGTAGTACTTTCTAACATTGTATATTGCATGTGCCTTGTTCATTTACTTAGGAACCTGAAGTTGAAGTGTAAGAGAATAGTTCATACTATATTTCATGCATGTAGGAAGGCTTTTAATATTGTAGACTTCGAACATGAAATGCGTTTGTTGGAATCTTTTGTCACTGGTATACGTGAGGAGCTTGAATCCATTGGTTTTGCTATGTGGTCTCGTGCATACTCACCACGTAGAAGATATAATGTCATGACCATGAAATGCGTTTGTTGGAATCTTTTGCCCCTGGTATACGTGAGGAGCTTGAATCCATTGGTTTTGCTAAGTGGTCTCGTGCATACTCACCACATAGGAGATATAATGTCATGACCACTAATATATCTGAAGGTTTGAATTCTGCTATGCTGAAGGCTAAGAAGTTACCAATATGTTCAATGTTTGAGGTTTTACGAATGATGTCGCAAAGAAGGTTTTTTAAACGAAGAAATGAAGTTGATTATCAAGTGACTGATTTTACCAAAACCATTGAAGGTATATTAAGGGAAACAGATTAAACGTAATCGATCAATGAAGGTATGCTCAATTTATTTATACTTACCCATTCTTTATATACATTATATAATTCTTTTATATATTTGCAATGTAGGTTAATCCGATTAATAACATGAAATACCAGGTCATAGATGGGACTCCCTACGTGTCATTTACTTACCTATGAAGGTTTGCAGTTGCAGGATGTGAGATATATTTGAAATACCTTGTGCGCATGCATGTGGTGTTTTGACCATGAAACATTTATCAATTAAGTCATATGTCTCACCTCTTTACTTGAACAGCACTTTGAGTTTAATATATA

mRNA sequence

ATTTACTGTTATCAAGGACCTAATTAAGAACAAAATTTTTTTAGCTGGTTCTGAATTGTCAACTCCCAAAGATATAGTTCGTTACATTCGTGCTGAACATGGTTTAAGCATATTTTACCAAATAGCATGGCGTGCTCGTGAGGCTGCGTTGGATGAGATTCACGGATCTCCGGAGGACTCCTACAAGATGATACCCCAATTTGTATACATATTGAAACTCAACAAACCATGTATATTAGCAATATAAAGATATAATGTCATGACCATGAAATGCGTTTGTTGGAATCTTTTGCCCCTGGTATACGTGAGGAGCTTGAATCCATTGGTTTTGCTAAGTGGTCTCGTGCATACTCACCACATAGGAGATATAATGTTAATCCGATTAATAACATGAAATACCAGGTCATAGATGGGACTCCCTACGTGTCATTTACTTACCTATGAAGGTTTGCAGTTGCAGGATGTGAGATATATTTGAAATACCTTGTGCGCATGCATGTGGTGTTTTGACCATGAAACATTTATCAATTAAGTCATATGTCTCACCTCTTTACTTGAACAGCACTTTGAGTTTAATATATA

Coding sequence (CDS)

TTTACTGTTATCAAGGACCTAATTAAGAACAAAATTTTTTTAGCTGGTTCTGAATTGTCAACTCCCAAAGATATAGTTCGTTACATTCGTGCTGAACATGGTTTAAGCATATTTTACCAAATAGCATGGCGTGCTCGTGAGGCTGCGTTGGATGAGATTCACGGATCTCCGGAGGACTCCTACAAGATGATACCCCAATTTGTATACATATTGAAACTCAACAAACCATGTATATTAGCAATATAA

Protein sequence

FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDSYKMIPQFVYILKLNKPCILAI
Homology
[Close]
BLAST of MELO3C033756 vs. NCBI nr
Match: KAA0033232.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS
Sbjct: 98  FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 157

Query: 61  YKMIPQFVYILKLNKPC 78
           YKMIPQFVYILKLNKPC
Sbjct: 158 YKMIPQFVYILKLNKPC 174

[Close]
BLAST of MELO3C033756 vs. NCBI nr
Match: KAA0044862.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 5.3e-26
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
          FTVIKDLIKNKI LAGS+LSTPKDIV +I  EHGLSIFYQ AWRAR AALD+I GSPEDS
Sbjct: 8  FTVIKDLIKNKISLAGSKLSTPKDIVHFICGEHGLSIFYQKAWRARGAALDDIRGSPEDS 67

Query: 61 YKMIPQFVYILKLNKP 77
          YKM+P+F YIL+LN P
Sbjct: 68 YKMLPRFAYILELNNP 83

[Close]
BLAST of MELO3C033756 vs. NCBI nr
Match: KAA0058851.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK23770.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKI L GSELSTPKDIV +IRAEH LSI YQ AWRARE ALD+ HGSPE+S
Sbjct: 52  FTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDNHGSPEES 111

Query: 61  YKMIPQFVYILKLNKP 77
           YKM+P+F YIL+LN P
Sbjct: 112 YKMLPRFAYILELNNP 127

[Close]
BLAST of MELO3C033756 vs. NCBI nr
Match: XP_008441658.1 (PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKI L GSELSTPKDIV +IRAEH LSI YQ AWRARE ALD+ HGSPE+S
Sbjct: 59  FTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDNHGSPEES 118

Query: 61  YKMIPQFVYILKLNKP 77
           YKM+P+F YIL+LN P
Sbjct: 119 YKMLPRFAYILELNNP 134

[Close]
BLAST of MELO3C033756 vs. NCBI nr
Match: XP_008450197.1 (PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLI+NKI LAGSELSTPKDIV +IR+EHGLSI YQ AWRA E ALD+IH SP+DS
Sbjct: 41  FTVIKDLIRNKISLAGSELSTPKDIVHFIRSEHGLSISYQKAWRACEVALDDIHESPKDS 100

Query: 61  YKMIPQFVYILKLNKPCI 79
           YK++P+F YILKLN P I
Sbjct: 101 YKILPKFAYILKLNNPII 118

[Close]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match: A0A5D3BGB6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00120 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS
Sbjct: 98  FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 157

Query: 61  YKMIPQFVYILKLNKPC 78
           YKMIPQFVYILKLNKPC
Sbjct: 158 YKMIPQFVYILKLNKPC 174

[Close]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match: A0A5A7TNE6 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001540 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
          FTVIKDLIKNKI LAGS+LSTPKDIV +I  EHGLSIFYQ AWRAR AALD+I GSPEDS
Sbjct: 8  FTVIKDLIKNKISLAGSKLSTPKDIVHFICGEHGLSIFYQKAWRARGAALDDIRGSPEDS 67

Query: 61 YKMIPQFVYILKLNKP 77
          YKM+P+F YIL+LN P
Sbjct: 68 YKMLPRFAYILELNNP 83

[Close]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match: A0A5D3DK39 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00920 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.7e-26
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKI L GSELSTPKDIV +IRAEH LSI YQ AWRARE ALD+ HGSPE+S
Sbjct: 52  FTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDNHGSPEES 111

Query: 61  YKMIPQFVYILKLNKP 77
           YKM+P+F YIL+LN P
Sbjct: 112 YKMLPRFAYILELNNP 127

[Close]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match: A0A1S3B4K4 (uncharacterized protein LOC103485740 OS=Cucumis melo OX=3656 GN=LOC103485740 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.7e-26
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLIKNKI L GSELSTPKDIV +IRAEH LSI YQ AWRARE ALD+ HGSPE+S
Sbjct: 59  FTVIKDLIKNKISLTGSELSTPKDIVHFIRAEHDLSISYQKAWRAREVALDDNHGSPEES 118

Query: 61  YKMIPQFVYILKLNKP 77
           YKM+P+F YIL+LN P
Sbjct: 119 YKMLPRFAYILELNNP 134

[Close]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match: A0A1S3BN44 (uncharacterized protein LOC103491857 OS=Cucumis melo OX=3656 GN=LOC103491857 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.4e-26
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1   FTVIKDLIKNKIFLAGSELSTPKDIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDS 60
           FTVIKDLI+NKI LAGSELSTPKDIV +IR+EHGLSI YQ AWRA E ALD+IH SP+DS
Sbjct: 41  FTVIKDLIRNKISLAGSELSTPKDIVHFIRSEHGLSISYQKAWRACEVALDDIHESPKDS 100

Query: 61  YKMIPQFVYILKLNKPCI 79
           YK++P+F YILKLN P I
Sbjct: 101 YKILPKFAYILKLNNPII 118

The following BLAST results are available for this feature:
BLAST of MELO3C033756 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033232.15.6e-36100.00protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.... [more]
KAA0044862.15.3e-2680.26protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa][more]
KAA0058851.11.2e-2578.95protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYK23770.... [more]
XP_008441658.11.2e-2578.95PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo][more]
XP_008450197.11.5e-2576.92PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo][more]
BLAST of MELO3C033756 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BGB62.7e-36100.00Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7TNE62.6e-2680.26Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3DK395.7e-2678.95Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3B4K45.7e-2678.95uncharacterized protein LOC103485740 OS=Cucumis melo OX=3656 GN=LOC103485740 PE=... [more]
A0A1S3BN447.4e-2676.92uncharacterized protein LOC103491857 OS=Cucumis melo OX=3656 GN=LOC103491857 PE=... [more]
BLAST of MELO3C033756 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033756.1MELO3C033756.1mRNA