MELO3C033733 (gene) Melon (DHL92) v4

Overview
NameMELO3C033733
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Locationchr09: 5205169 .. 5213855 (+)
RNA-Seq ExpressionMELO3C033733
SyntenyMELO3C033733
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACATTGGAGCAAATTCGGATATTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAAGAGGTCTCTGGTTTTTGTTGTATTTCTGAGTGTACCGGTGGAGTTAGGATCTCTATTTTGTATGGTTGGAAAGGTTATTCAATTTAATACAACGTTCATGAATAAATCGTGAACCAAAAATGACTAAAAATCAGTTAAATTGTAGGTACAAGTTAAAGAGGTCGTGTGCACGTGATTCTTGAAGTTGTTCTGTTTCGATGGTTATCTGAGTTTATTCACAGGGAATCAGATTTACATGTCTTCAGGTAAGTTTTACAAGATCTCAAAATGAAGATTTTGATATAAAGAACACTCATGTTGTTTAAGTATTGAGAAAGTTATCGTCCTTTGAAGTTTATGTTAGAAATTTGGAAATTTCAGAGAATTGTTGAAATAGGATTTTATTTCTTAAGCTTTGTTTTCGTGAGCGTCATCTTTGGTGCGACATGTTATATATATTTTTAGGAAACTAGAATGTTTAGAGTTTTAATACTCGGTTTGTTGGCAAACCGAGAAGAATTAAACCGAGCTTATAGACCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAACTGTTATTATGATTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATCTGAACTCATGACTATTTTCAAGTATACATTTGGAGACTAGATTTCTTAAAGAAATTTATGCTAGCACGTAGATATTAAATGTTTGGAAAGTATTTAAACCACAATGTCTTAAGCTAAGCATGAATTAGTAAGAAGTTTTGTTTTAAGAACTACATTTTTCCATGAACGAGCTCAGTAAAGTTCGAGCTTTGTGTAAAATTTATAAGTAGGCATTTTTTAATATTTTTAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCATGAGGCTAGAGATTACCGTGTGTACATTGGTTAGATTCCCTTGTTGACGTTGAGTGTACTCCGTAACAACGATGCTATCATGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGTCCCACTACATCGTAGAGCTTGTAAACGTTGCTGTACTGGGTGTACCCTACACAACATAGATTTGTCATGTTATTTAAAATGCTTCGATATACTTGATATTCCTTGCTAGAATTCAATGACGAACATGCTGAGTATTTGAGGAATCTATTCTTATTACTACACGTTTACATTTATGACTTGTATAAACAGATTTAAATATGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGATTCACTCACTGAGCTTCATGGCTCACCCTTTCCAAAATGTTTTACCCATTTTTCAGTAGGGATCAAATTCTCGGTGCCTGATAGACTGCCTTAGTCTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGTACATTGGTTAGATTCCCTTGTTGACGGTTAGTGTACTCCGTAACAACGATGCTATCATGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGTCCCACTACATCGTAGAGCTTGTAAACGTTGTTGTACTGGGTGTACCCTACACAACATAGATTTGTCATGTTATTTAAAATGCTTCGATATACTTGATATTCCTTGCTAGAATTCAATGACGAACATGCTGAGTATTTGAGGAATCTATTCTTATTACTACACGTTTACATTTACGACTTGTATAAACAGATTTAAATATGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGATTCACTCACTGAGCTTCATGGCTCACCCTTTCCAAAATGTTTTACCCATTTTTCAGGTAGGGATCGAATTCTCGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCATTATCGATTGCCAGTATGTGTTTTGAGTTGGGCATAGAGTCTGTTGTGTTGTGATGTATATACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTTAGGAGCTATAGTTGTGTAGATTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCATGAAATCGGTAAATTTTGAGGTACACTTCATGTATGTGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTTGCATGTATAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCATCGACTTTAGGCCATCTATCGGTTTAAGGTAGCAGGTAGTCCGGGAGGGGGTGTGACAACTTGGTATTAGAGCAGTTTGCTCCATGGGAATTAAGGTAGATCGGTTAGCTCTAAGAAGAAACTGGAAAGTAAATAATTGAAAGTCAAGTTAGCTTAAAGGGAACTAGTGGAGTATCGTCTAGGTAAGGGTAGAAGTAAGTCCAATTATTATTAATATGTGAGTAGACATTTAGTATCATGCATTTGAGTTAAGTATTTATAGTATTTCTAATGTGTTGACATATTATAGGAGTCATGCCACCACGTACTGGTAGACTATGCCGGCAGAATAAGGACGGGATGTAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGCAGGAAATGAGCAGTTTGCGAGAACTACATAGGAAATATGAAGGCCAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACAGAATTGAACGACTGAAGAAGTTAGGGGCTACAGTGTTTTAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCATAAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTACAAAAAGACGCCGAAGGATGGTGGAAATCTATATTAGCAAGGTGCAGTGATGCACGTGCTTTAGACCGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAATGGATGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTAGCTTCTAAGAGTGAGAGGTGCCGAAGGTTTGAAAGAGGGTTGCATTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGAACGAATTTCTCCCAGTTAGTGGAGACTGCCTTTTTGTGGAGCAGAGTATAATAGAAGAGATATCGGCAGTGGAGCTTAGTTGTGGGACTTCAACAACTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCGTTGCTAGTATTGTCAGGCGAACACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGTCGATGTATGTTACCAGTGGGAACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTTAACATGACAGTTCAGAGAGATCAGGGAGTAGGGTCCCAGACAGTTGAGCAATTGAGAGTTTTAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGATGACCTAAGCAACAAGGAAAAATCTATGCTATGACTCAACAAGAAGCAGAGGATGCACTAGACATTATTACTGGTACGATTCTTATTTGTAATGTACCTGCAGATGTTTTATTTGATCTAGGTGCTATGCATTCCATTGTTTCTAGTATATTTTTTACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGCTATATACACTCCAGTTGGTGACGTTTTATTTGTCAATGAGGTGCTGCGTAATTGTGAAGTTTTAGTAGAATGTATCAGTATGCTAGTGGACTTGCTACCACTAGATTTGCAGAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTCGCTCACTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGATTTGCTCAAGTGGTTTTTAGAGATTTGAGGAAGGTCGTTTCTAGGAGTTTAATCTCAGTTTTGAAAGCTGATAAATTGCTGAGGAAGGGTTGCACAACGTTTCTTGCACACATCGTAGTAGTGTAGAGAGAAAAGCTGAAGCCAGAAGATGTTCATGTGGTGAAAGAGTTTCTTGATGTATTTCCACATGATCTATCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGAATAGTACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAATTGGTTGACAAGGGATACATCAGGCCTAATGGATAGCCTTGGGGAGCACTAGTGCTATTTTTGAAAAAGAAAGATGGTACCTTCAGATTATGTATTGACTATAGACAGATAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTTATCAATTAAAGGGAGTAGCATTGTTCTCTAAGATTTACTTAAGGTCAGGATACCATCAGTTGAAGGTTAGAGAATTAGATATTGCTAAGATAGCATTCAAAACGAGGTATGGGCATTATGAGTTTTGAGTTATGCCATTCGTTTAACGAATGCGCCAACGGTTGTCATAGATCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTAATGATATATTAGTTTACTCGGTTGACAAAGAAGGCCATGAGGAACATCTGAGGATTGTTCTACAAACTCTACGTGATAAACAGTTGTATGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCACCAAAAAGGGTTAGTGTAGATCCATAAAAAGTGGAAGCGGTTGTCAATTGGGAAAGACTAATTAGTATGATAGAAGTAAGTAGTTTCCTAGGTTTGGCAGGATATTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGAAAGAATGTTAAGTTTGAGTGGTTAGATAAATGCTAGCAAAGCTTTCAGGAATTGAAGAAAAGACTATGTGATTGTGACGCTTCAAGGCTATGATTAAATTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGTCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGTGATGGCTAGAACTAATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCTAACGTAGTAGCGGCTGCATTAAGTAGGAAATCAAGACTTCCGGGGAGTGCCTTGTGTGGTATTCAAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAAACAGTAGTAACTATAGAGGATTCAGGAAGTCTCTTAGCTCAATTTTGAGGTTCGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAGTGAAGATTATGTATTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGATAGAGGCAAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGAAGCATATTACTTTGGATTTTCTATTTGGATTACCTTGTACATCGAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTCTACCGATTAAAATGACATATACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCGGTGTTCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAAAGGGAACAGGGCTAAAGTTTAGTACAACATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTCAGAGCATGCGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGTAGACCATGCAGAAATCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGATCCTGAGTTGTTTCAGATTACGACAAATAATATTAAGTTGATCAGAGAAAATTTGAGGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTCAACTTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACAGAACGAGTGGGACCAGCAGTGTATAGACTTGAGTTGTCAATAGAACTTGCACGAATACATGATCTTTTCCATGTATCCATGTTAAGAAAATATATACAAAATCCATCACATGTGTTGCAAGAGCAACCAGTTGAACTGAAAGAAGATTTGGGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAATTTTGAGAAACAAAACGATTCCACTCATAAAGGTTTTGTGGAGATATCATGGAGTGGAGGAGGAAACTTGGGAACCGGAAGATCAGATGAAAAAGAGATACCCGATACTTTTCATTTAAGAACATAATAAATTTCGAGGACAAAATTTTCTAAGGGGAAGGTAAGTTGTAAACCCGATATTTTCTTGGTTTAATTTCTTTAAATGTGGAAAAAAATAGAAATTAAATGTAAATATATATATATATATATATATTTAATGGTTTATTAAGTAAAATAAAGAAAAGAAAGAAAAGAAAGGATAAAAGGAAAAAAAAAATAAGAAGAATATTTCACTTTTTCTTTTCTTCTTCTTTTCTTTTCACCGCCAAACATTTTTTTAAAGAAAGGTTCTCATCCATCTTCCATTCTTTTTTCTTCTTCAATTTGCAGAGAACATTTAAGAGAGAGTTTAGAAGAAGAAGAGAAATTTTACTAGAATATTGAGGTTGAAGAAGAGGAGGAGAACTCAAGCAAAGAGTATCCATGGCTGAATTTTAGTTCATTTTGCACATCACTGGTTTTTAATTCGGTTTGAACTCTTCAAAAGGAATTAGGAGGTGAGATTTACATTTACTGAAAGTTAACTCATTTTCAAACAAACTTTATGGAGAACGTTGGAGCAAATTCGAATATTCATTTGGTGCTTTTTGATGAAGAAAACAAGGCAGTTGGTTTTCACTAGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCTGAGTGTACCGGTTGAGTTAGGATCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTACTACAACATTCATGAATAAATCGTGAATCAACAACGACTAAAAATCAGTTAAATTGTAGGGACAAGTTAAAGAGGTCGTGTGTGCGTGATTCTTGAAGTTGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCTGATTTACATGTCTTCAGATAAGTTTTACAGGATCTCAAAATGAAGATTTTGATATAAAGAACACTCATGTTGTTTAAGTATTGAGAAAGTTATAGTCCTTTGAAGTTTATGTTATAAATCTGGAAATTTCAGAGAATTGTTGAAATAGGATTTTATTTCATAAGCTTTGTTTTCGTGAGCGTCATCTTTGGTACGACATGTTATGTATATCTTTAGAAAACCAGAATGTTTAGTGTTTTAATACTCGGTTGGGTTATTGGCAAGCCGAGAAGAATTAAACCGAGCTTATAGACTAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAACTGTTATTATGATTGAATGCGATAAATGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTTGCATGTATAATAGTTTATATACTAGATTGGCAAGTTTATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCATGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGAGAGGGGGTGTGACATACATAATTCTTGTTTTCCCTGAAGAAAAAATAAGGAGAATAGGAAAAGAAGACAAGGAGAAGATGATAAAAAAAGAGAAGCCGACGAAGAGGGAGAAATCTAAAAGAACGAAACTAAAGAGAGAAGAGAAGGACGGTGGAGAAGAACAGTGGAGACGAGGCAGAAAAAGACGAGGTGAAGAGAAGTAG

mRNA sequence

ATGAAGAACATTGGAGCAAATTCGGATATTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAAGAGGTCTCTGGGAATCAGATTTACATGTCTTCAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGAGTCATGCCACCACGTACTGGTAGACTATGCCGGCAGAATAAGGACGGGATGTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCATAAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTACAAAAAGACGCCGAAGGATGGTGGAAATCTATATTAGCAAGGTGCAGTGATGCACGTGCTTTAGACCGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAATGGATGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTAGCTTCTAAGAGTGAGAGGTGCCGAAGATTGGCAAGTTTATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCATGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGAGAGGGGGTGTGACATACATAATTCTTGTTTTCCCTGAAGAAAAAATAAGGAGAATAGGAAAAGAAGACAAGGAGAAGATGATAAAAAAAGAGAAGCCGACGAAGAGGGAGAAATCTAAAAGAACGAAACTAAAGAGAGAAGAGAAGGACGGTGGAGAAGAACAGTGGAGACGAGGCAGAAAAAGACGAGGTGAAGAGAAGTAG

Coding sequence (CDS)

ATGAAGAACATTGGAGCAAATTCGGATATTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAAGAGGTCTCTGGGAATCAGATTTACATGTCTTCAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGAGTCATGCCACCACGTACTGGTAGACTATGCCGGCAGAATAAGGACGGGATGTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCATAAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTACAAAAAGACGCCGAAGGATGGTGGAAATCTATATTAGCAAGGTGCAGTGATGCACGTGCTTTAGACCGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAATGGATGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTAGCTTCTAAGAGTGAGAGGTGCCGAAGATTGGCAAGTTTATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCATGCCATCTTTCGGTCTAAGGTAGCAGGTAGTCCGAGAGGGGGTGTGACATACATAATTCTTGTTTTCCCTGAAGAAAAAATAAGGAGAATAGGAAAAGAAGACAAGGAGAAGATGATAAAAAAAGAGAAGCCGACGAAGAGGGAGAAATCTAAAAGAACGAAACTAAAGAGAGAAGAGAAGGACGGTGGAGAAGAACAGTGGAGACGAGGCAGAAAAAGACGAGGTGAAGAGAAGTAG

Protein sequence

MKNIGANSDIHLVLFDEENRAVGFHSKSRGLWESDLHVFRLASSSHESFKQSRQIQESCHHVLVDYAGRIRTGCKGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALDRQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERCRRLASLSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSPRGGVTYIILVFPEEKIRRIGKEDKEKMIKKEKPTKREKSKRTKLKREEKDGGEEQWRRGRKRRGEEK
Homology
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BLAST of MELO3C033733 vs. NCBI nr
Match: KAA0051483.1 (uncharacterized protein E6C27_scaffold174G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 9.9e-62
Identity = 128/179 (71.51%), Postives = 133/179 (74.30%), Query Frame = 0 

Query: 53  RQIQESCHHVLVDYAGRIRTGCK-----------------------------------GS 112
           R  +ESCHHVLVD A RIRTGCK                                   GS
Sbjct: 27  RNWKESCHHVLVDDADRIRTGCKVLPKEIGRPDRAEPSDPEKAYEIERLKKLGVTVFEGS 86

Query: 113 TDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALDRQT 172
           TDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AE WWKSILAR  DARALD QT
Sbjct: 87  TDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEEWWKSILARRGDARALDWQT 146

Query: 173 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERCRR 197
           FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTELSRYADVIVASKS+RCRR
Sbjct: 147 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASKSDRCRR 205

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BLAST of MELO3C033733 vs. NCBI nr
Match: KAA0036882.1 (uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-58
Identity = 110/122 (90.16%), Postives = 118/122 (96.72%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWKSILARCSDARALD
Sbjct: 63  EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARCSDARALD 122

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTE+SRYADVI+AS+S+RC
Sbjct: 123 WQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTEVSRYADVIIASESDRC 182

Query: 195 RR 197
           RR
Sbjct: 183 RR 184

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BLAST of MELO3C033733 vs. NCBI nr
Match: KAA0050832.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-58
Identity = 122/179 (68.16%), Postives = 130/179 (72.63%), Query Frame = 0 

Query: 53  RQIQESCHHVLVDYAGRIRTGCK-----------------------------------GS 112
           R  +ESCHH+LVD A RIRTGCK                                    S
Sbjct: 12  RNWKESCHHILVDDADRIRTGCKVLHKEIGRPDRAEPSDPEKAYEIERLKKLGATVFESS 71

Query: 113 TDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALDRQT 172
           TDP DAEN LNMLEKCFD MNC  ERKVRLATFLLQK+AEGWWKSILAR SDARALD QT
Sbjct: 72  TDPADAENLLNMLEKCFDAMNCPDERKVRLATFLLQKEAEGWWKSILARRSDARALDWQT 131

Query: 173 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERCRR 197
           FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYE KYTELSRY+DVIVAS+S++CRR
Sbjct: 132 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEWKYTELSRYSDVIVASESDKCRR 190

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BLAST of MELO3C033733 vs. NCBI nr
Match: KAA0042349.1 (uncharacterized protein E6C27_scaffold795G00510 [Cucumis melo var. makuwa] >TYK15472.1 uncharacterized protein E5676_scaffold477G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 6.7e-58
Identity = 136/236 (57.63%), Postives = 145/236 (61.44%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWK ILAR SDARALD
Sbjct: 63  EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKYILARRSDARALD 122

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIF+DKYY STYCEAKRDEF GLKQGSLS+ EYERKYTELSRYA VIVAS+S+  
Sbjct: 123 WQTFRGIFKDKYYASTYCEAKRDEFFGLKQGSLSVAEYERKYTELSRYAGVIVASESDSI 182

Query: 195 RRLASL----------------------------SHESFK-------------------- 239
               S                             S + FK                    
Sbjct: 183 TEEKSTVELSRGTSTTSGFNGCEQRRFTPGINISSRQDFKNRSKGQSSRNVSYGSVFQRQ 242

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BLAST of MELO3C033733 vs. NCBI nr
Match: KAA0042134.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-57
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWKSILAR SDARALD
Sbjct: 223 EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALD 282

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTELSRYADVIVAS+S+RC
Sbjct: 283 WQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRC 342

Query: 195 RR 197
           RR
Sbjct: 343 RR 344

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BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match: A0A5A7U6G1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00020 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62
Identity = 128/179 (71.51%), Postives = 133/179 (74.30%), Query Frame = 0 

Query: 53  RQIQESCHHVLVDYAGRIRTGCK-----------------------------------GS 112
           R  +ESCHHVLVD A RIRTGCK                                   GS
Sbjct: 27  RNWKESCHHVLVDDADRIRTGCKVLPKEIGRPDRAEPSDPEKAYEIERLKKLGVTVFEGS 86

Query: 113 TDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALDRQT 172
           TDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AE WWKSILAR  DARALD QT
Sbjct: 87  TDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEEWWKSILARRGDARALDWQT 146

Query: 173 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERCRR 197
           FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTELSRYADVIVASKS+RCRR
Sbjct: 147 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASKSDRCRR 205

[Close]
BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match: A0A5A7T0C1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2534G00010 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 110/122 (90.16%), Postives = 118/122 (96.72%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWKSILARCSDARALD
Sbjct: 63  EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARCSDARALD 122

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTE+SRYADVI+AS+S+RC
Sbjct: 123 WQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTEVSRYADVIIASESDRC 182

Query: 195 RR 197
           RR
Sbjct: 183 RR 184

[Close]
BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match: A0A5A7U4R7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00920 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 122/179 (68.16%), Postives = 130/179 (72.63%), Query Frame = 0 

Query: 53  RQIQESCHHVLVDYAGRIRTGCK-----------------------------------GS 112
           R  +ESCHH+LVD A RIRTGCK                                    S
Sbjct: 12  RNWKESCHHILVDDADRIRTGCKVLHKEIGRPDRAEPSDPEKAYEIERLKKLGATVFESS 71

Query: 113 TDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALDRQT 172
           TDP DAEN LNMLEKCFD MNC  ERKVRLATFLLQK+AEGWWKSILAR SDARALD QT
Sbjct: 72  TDPADAENLLNMLEKCFDAMNCPDERKVRLATFLLQKEAEGWWKSILARRSDARALDWQT 131

Query: 173 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERCRR 197
           FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYE KYTELSRY+DVIVAS+S++CRR
Sbjct: 132 FRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEWKYTELSRYSDVIVASESDKCRR 190

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BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match: A0A5A7TLX3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00470 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.2e-58
Identity = 136/236 (57.63%), Postives = 145/236 (61.44%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWK ILAR SDARALD
Sbjct: 63  EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKYILARRSDARALD 122

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIF+DKYY STYCEAKRDEF GLKQGSLS+ EYERKYTELSRYA VIVAS+S+  
Sbjct: 123 WQTFRGIFKDKYYASTYCEAKRDEFFGLKQGSLSVAEYERKYTELSRYAGVIVASESDSI 182

Query: 195 RRLASL----------------------------SHESFK-------------------- 239
               S                             S + FK                    
Sbjct: 183 TEEKSTVELSRGTSTTSGFNGCEQRRFTPGINISSRQDFKNRSKGQSSRNVSYGSVFQRQ 242

[Close]
BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match: A0A5A7TFC5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006220 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.1e-57
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 75  KGSTDPVDAENWLNMLEKCFDVMNCHKERKVRLATFLLQKDAEGWWKSILARCSDARALD 134
           +GSTDP DAENWLNMLEKCFDVMNC +ERKVRLATFLLQK+AEGWWKSILAR SDARALD
Sbjct: 223 EGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALD 282

Query: 135 RQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSMDEYERKYTELSRYADVIVASKSERC 194
            QTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLS+ EYERKYTELSRYADVIVAS+S+RC
Sbjct: 283 WQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRC 342

Query: 195 RR 197
           RR
Sbjct: 343 RR 344

The following BLAST results are available for this feature:
BLAST of MELO3C033733 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051483.19.9e-6271.51uncharacterized protein E6C27_scaffold174G00020 [Cucumis melo var. makuwa][more]
KAA0036882.15.1e-5890.16uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa][more]
KAA0050832.15.1e-5868.16DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0042349.16.7e-5857.63uncharacterized protein E6C27_scaffold795G00510 [Cucumis melo var. makuwa] >TYK1... [more]
KAA0042134.14.3e-5790.98DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C033733 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U6G14.8e-6271.51Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7T0C12.5e-5890.16Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7U4R72.5e-5868.16Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40... [more]
A0A5A7TLX33.2e-5857.63Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TFC52.1e-5790.98Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
BLAST of MELO3C033733 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 107..190
e-value: 1.3E-8
score: 35.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..300
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 77..296
NoneNo IPR availablePANTHERPTHR34482:SF4POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATEDcoord: 77..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033733.1MELO3C033733.1mRNA