MELO3C033672 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033672
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Plant transposase
Location	chr12: 10803012 .. 10803964 (-)
RNA-Seq Expression	MELO3C033672
Synteny	MELO3C033672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTTGTTGTGATTGTCTTATGCCCCTCCACCCACCCCCCATCCACCATGACTTTTGCATACTTAATGTGATTTTTGGTTAAGCGCGTATTGAGGAAAATCGTATGGCTTCTTTGAATAGTGTTGCTGCTGCCATTTTTTATGTTTAAACTCTTCTGAGCTTGCTGGCCATTGAGTAGTTGCTGTTCATTGAGTAGTAGATTGTTTCCTTTATGTAATTTGCTTGTTGTGAATGTCTTATGCCCTTCCACCCACTCCCCATCCACCATGACTTTTGCATACTTAATATGATTTTTGGTTAGGATCGTATTGAACAAAATCGTGTGGCTTCTTCAAGTAGTATAATTGATGATGCAATTAGTAGAGTTCTTGGGCCCGATCAAACCTATGTAAGAGGACTAGGATTTGGTGTGACTCTATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTACATCTCTTGAAAAAAAATGTGACAACCTTACTTCGGATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTATTAAAGGACAAGGTAAATTTTGTCTTAACACTCTTAAAACTTCTTAAATTTTGTTTGTAGCACATTTTGACATTGTTGTTTATATAGGAAAAAACAAGTGATGACAATTCTAATCATCTTGTTAAAAGAGTACCATCATCGACACATATTCGTACTCCTACTCCTACTCCAATCATAAATTCTCCACCGGTAAATCTAATCATCTTTGCTATTTTAAATTATTATTGTTTGAGAATTTTCTAACCATAATATTGTTGAAAAAGAGTGTTACTACCAACACTCCCCATAAGTGCTTGCTACTAGATTGGATTGGTTCAGGAGAAGTCATTGCTGAAGGTAGATGGTCTTCCAATGATCCATCTGTTCTTGTCCACCATGTACCTCTTGGCCCCAATGCAGTTCGTGTGTGGGTTGATACGGTGA

mRNA sequence

TTGCTTGTTGTGATTGTCTTATGCCCCTCCACCCACCCCCCATCCACCATGACTTTTGCATACTTAATGATCGTATTGAACAAAATCGTGTGGCTTCTTCAAGTAGTATAATTGATGATGCAATTAGTAGAGTTCTTGGGCCCGATCAAACCTATGTAAGAGGACTAGGATTTGGTGTGACTCTATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTACATCTCTTGAAAAAAAATGTGACAACCTTACTTCGGATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTATTAAAGGACAAGGAAAAAACAAGTGATGACAATTCTAATCATCTTGTTAAAAGAGTACCATCATCGACACATATTCGTACTCCTACTCCTACTCCAATCATAAATTCTCCACCGAGTGTTACTACCAACACTCCCCATAAGTGCTTGCTACTAGATTGGATTGGTTCAGGAGAAGTCATTGCTGAAGGTAGATGGTCTTCCAATGATCCATCTGTTCTTGTCCACCATGTACCTCTTGGCCCCAATGCAGTTCGTGTGTGGGTTGATACGGTGA

Coding sequence (CDS)

ATGCCCCTCCACCCACCCCCCATCCACCATGACTTTTGCATACTTAATGATCGTATTGAACAAAATCGTGTGGCTTCTTCAAGTAGTATAATTGATGATGCAATTAGTAGAGTTCTTGGGCCCGATCAAACCTATGTAAGAGGACTAGGATTTGGTGTGACTCTATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTACATCTCTTGAAAAAAAATGTGACAACCTTACTTCGGATGTAGATGAGTTGAAAAGTGTGGTAGCTTCCTTATTAAAGGACAAGGAAAAAACAAGTGATGACAATTCTAATCATCTTGTTAAAAGAGTACCATCATCGACACATATTCGTACTCCTACTCCTACTCCAATCATAAATTCTCCACCGAGTGTTACTACCAACACTCCCCATAAGTGCTTGCTACTAGATTGGATTGGTTCAGGAGAAGTCATTGCTGAAGGTAGATGGTCTTCCAATGATCCATCTGTTCTTGTCCACCATGTACCTCTTGGCCCCAATGCAGTTCGTGTGTGGGTTGATACGGTG

Protein sequence

MPLHPPPIHHDFCILNDRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNTPHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV

Homology

[Close]

BLAST of MELO3C033672 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNRVASSSSIIDDAISRVLGPDQ YVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRVASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVAS LKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 5.1e-85
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNR ASSSSIIDDAISRVLGPDQ YVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRRASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. NCBI nr
Match: TYK28558.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80
Identity = 159/166 (95.78%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 18  RIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDN 77
           RIEQNRVASSSSIIDDAISRVLG DQ YVRGLGFGVTLSKVSTSI KDKTITSLEKKCDN
Sbjct: 96  RIEQNRVASSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDN 155

Query: 78  LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNTP 137
           LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNTP
Sbjct: 156 LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTP 215

Query: 138 HKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           HKCLLLD +GSGEVIAEGRWSSNDPSVLVHHVPLG NAVRVWVDTV
Sbjct: 216 HKCLLLDCLGSGEVIAEGRWSSNDPSVLVHHVPLGLNAVRVWVDTV 261

[Close]

BLAST of MELO3C033672 vs. NCBI nr
Match: KAA0052811.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 156/168 (92.86%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 16  NDRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKC 75
           N+RIEQNRVASSSSIIDDAISRVLGPDQ YV+GLGF VTLSKVSTSIQ DKTITSLE KC
Sbjct: 191 NERIEQNRVASSSSIIDDAISRVLGPDQGYVKGLGFCVTLSKVSTSIQNDKTITSLENKC 250

Query: 76  DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTN 135
           DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPS  HIRT TPTPIINSPPSVTTN
Sbjct: 251 DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSLAHIRTHTPTPIINSPPSVTTN 310

Query: 136 TPHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           TP+KCLLL WIGSGEVIAEGRWS NDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 311 TPYKCLLLGWIGSGEVIAEGRWSFNDPSVLVHHVPLGPNAVRVWVDTV 358

[Close]

BLAST of MELO3C033672 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNRVASSSSIIDDAISRVLGPDQ YVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRVASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVAS LKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 17  DRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 76
           DRIEQNR ASSSSIIDDAISRVLGPDQ YVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD
Sbjct: 311 DRIEQNRRASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCD 370

Query: 77  NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNT 136
           NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNT
Sbjct: 371 NLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNT 430

Query: 137 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 431 PHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 477

[Close]

BLAST of MELO3C033672 vs. ExPASy TrEMBL
Match: A0A5D3DYN2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002050 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.2e-81
Identity = 159/166 (95.78%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 18  RIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDN 77
           RIEQNRVASSSSIIDDAISRVLG DQ YVRGLGFGVTLSKVSTSI KDKTITSLEKKCDN
Sbjct: 96  RIEQNRVASSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDN 155

Query: 78  LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNTP 137
           LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSS HIRTPTPTPIINSPPSVTTNTP
Sbjct: 156 LTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTP 215

Query: 138 HKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           HKCLLLD +GSGEVIAEGRWSSNDPSVLVHHVPLG NAVRVWVDTV
Sbjct: 216 HKCLLLDCLGSGEVIAEGRWSSNDPSVLVHHVPLGLNAVRVWVDTV 261

[Close]

BLAST of MELO3C033672 vs. ExPASy TrEMBL
Match: A0A5A7UH01 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold773G00020 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 156/168 (92.86%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 16  NDRIEQNRVASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKC 75
           N+RIEQNRVASSSSIIDDAISRVLGPDQ YV+GLGF VTLSKVSTSIQ DKTITSLE KC
Sbjct: 191 NERIEQNRVASSSSIIDDAISRVLGPDQGYVKGLGFCVTLSKVSTSIQNDKTITSLENKC 250

Query: 76  DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTN 135
           DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPS  HIRT TPTPIINSPPSVTTN
Sbjct: 251 DNLTSDVDELKSVVASLLKDKEKTSDDNSNHLVKRVPSLAHIRTHTPTPIINSPPSVTTN 310

Query: 136 TPHKCLLLDWIGSGEVIAEGRWSSNDPSVLVHHVPLGPNAVRVWVDTV 184
           TP+KCLLL WIGSGEVIAEGRWS NDPSVLVHHVPLGPNAVRVWVDTV
Sbjct: 311 TPYKCLLLGWIGSGEVIAEGRWSFNDPSVLVHHVPLGPNAVRVWVDTV 358

The following BLAST results are available for this feature:

BLAST of MELO3C033672 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C033672 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032201.1	5.4e-87	100.00	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057491.1	3.9e-85	98.20	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0042856.1	5.1e-85	98.20	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK28558.1	1.7e-80	95.78	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0052811.1	2.4e-79	92.86	transposase [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRN7	2.6e-87	100.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7UVF2	1.9e-85	98.20	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]
A0A5A7TLJ2	2.5e-85	98.20	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5D3DYN2	8.2e-81	95.78	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00...	[more]
A0A5A7UH01	1.2e-79	92.86	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold773G00020 PE...	[more]

BLAST of MELO3C033672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033672.1	MELO3C033672.1	mRNA