MELO3C033665 (gene) Melon (DHL92) v4

Overview
NameMELO3C033665
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTranscription factor bHLH130
Locationchr09: 9603131 .. 9605567 (-)
RNA-Seq ExpressionMELO3C033665
SyntenyMELO3C033665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTTGTTCGACATCGTCTCTTCCGTCTGCGTGGTGTTCATCATCGCTCGCAAGTCGTCGCCACCTCTTCTGTCTGCGTGTCGTTTCGTCGTTGCTCATGGTTGCTCGTGTTCACCGTCGCTCGTTGCTCGTGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCCGTCGTCGCGCGTTCTGTTCCGTCTGCACATGTTCGTTGTCGCTCGCAAGCAGCCGCCGCCTCTTCCGTCTGCGCAGGTTCGTCTGCCGCCGCCGTTCAGAAGCCACCTCTTCCATCTGCACAGGTTAAATTACTTCATACTTCTGACGTTCAGAAGCCACCGCGCGTTCTACAGGTTCTTTGCTTAAATTAATTCATACTTCATAAGCAATTAGTAATCGAATGTGGAGTATTCTTTTCAGAACTATGGAGAAAACTTTTGAAATTATGTTTTCTGATAATATTTCTTTGAAATATTATTTAACAGGCATGCTTTGTTAGCCAGAAATTGGGGAATTTTAGTAAAGCTTCCAATCAGTTTAAGGAACTAGCAAAGTAAACTAATTACTAAAGTTTTTTTTCTTTAATTTATAATTTTTTTGGCATTGGCTGCTATTTTGAGTAATGACTCTTTTCTTGTGTGGAGCTTCTTGTTTGGCCATTCTAAAAGCTAAAAGAATTTGGGATCAAAACAAGAGCCCCAATTGATCATTTCCTTTTTCTTTTCTTCTTTAAATTCTAGTTTCAGTTCTTTCATAATGTTATTTTTGTATTTCCCTTCATTATATTTCGTGGAGCAACAGTGACATGGACTCTTTTGATAGCTTGCTTGCTTTTAATGGATTATAATCTCTCTGAGTTGGTATATGCTTCTTTGTTTTGAAGGTCAACAAGATTACAGTAGACTTAGGTATGGGCCTTTTGCTATTGTTTGATGTGTTGTAGCTTGATAGAGGTCTTGTCGTCTTCTTTTTCTTTACATAAAAAATAATAAGTGTTCTTTTTTACCAAGACATCAATTTTTTTTTTTTTTTTTGCATTTAATTGAATTGTTTGTTGTGTTGGATCGAGTTATTGGAGCCTTTACTTCTTTACCAAACGAATGATGAACTGTTTTAACTTTTAAGTCAATCCATGTCTTTTACAAATTGTTCCACAATTTCGTTCATTTTACCGTAGTTTTTGTAGGACAAAAGAATTTAGAAAAGCCATTGTCATGTCTTTTTTGATTTTTTAAAGTAAGGCGCATTCTAATTAAATTATGTCATAATTGGAGTCTTCTATCCTCTAAGAGTCGAGAGTTGAATATATTGACCAACATCTCCCTGATATTTTTCACCCTTATATTGGTTCCATAACTTATTCTACTTTTTGGGTTCTAAACTGTAATATAATTTTGTATTCAACTCATCAACAAGTGTATATTTGGGTTCTAAACCTTTGGATTTTGTATCGTTATAGACGTTGTAGACATTGGTGTTAGTTTTGTCAATATGCAATATATAAGTGTTTTATGAGTTATGAGGCCAGTAAAAGGGGACTAATTATGTGTATGTTGAAGAGATAGTGCCAATGTTTTTGTATATATGCTTGCACACCATGTGAAATATCGAGTAATTGGTTTTGGTTTTAAACGGTTTAGTTGAACTTTTAGTAAATGTTATTGACATTCATATCTAATGCCAATTTTTTTTTTTTTTTGGAAGACCTTGGTGGCAATACAAGCATGTTCAACATATTCATATCAAATAACTACATTGAAAAAAAATGTGAGTATTAAAGATTCATCTTCTTCGCCATTTTTATCTAATTGTGGTGTTTATCTTTAATCTCATTGCTTTTGCACTTGCTGTTGTTGTAGAGTAGAGAAGAGCTACTGTAAGTTACGTGTATTTGTTGCAACTCTTTATTGATTGCTTTTATTGTTTGATGAATGATGTTTTTCTGATAAGAAGTATTATTGAGAATTCGAAAGGGTTTGTGATTTTCATATTGGTTGTGCTGAAATGACTTACTGATTTTTGGGTTAAGTTATATGTCGGTGGCTTTTGTATAGAAATGCTTTAGGTGGTTTAAGTTATGTGTAGGTTGATGTAATTACATGTATATATTATCTTGTTTTTAGATCATTTTTTTCAATTGTTTGTGAATTATGATGGGATTGTGAAGATCATTTTTTTAATCGTTGTTATTGGTTTATGATTAATTAAGACTAATGACTGTTGCTTTGTCGATATTTGTACCATTTTATTTATCTTTATACTAATCTCGGGTTGTTATTGGTTTTTGAATCAGAAATGTTTGACTGTTGTTTTGTCCGTTGTGGGTGTTTGCACTATTTCATGTCTTTATAATAGGTCTTATTTTGAGTTACAATCATCATTTTTTTTCTTACTAGATTTTGCTAGAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGA

mRNA sequence

AAGCTTGTTCGACATCGTCTCTTCCGTCTGCGTGGTGTTCATCATCGCTCGCAAGTCGTCGCCACCTCTTCTGTCTGCGTGTCGTTTCGTCGTTGCTCATGGTTGCTCGTGTTCACCGTCGCTCGTTGCTCGTGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCCGTCGTCGCGCGTTCTGTTCCGTCTGCACATGTTCGTTGTCGCTCGCAAGCAGCCGCCGCCTCTTCCGTCTGCGCAGGTTCGTCTGCCGCCGCCGTTCAGAAGCCACCTCTTCCATCTGCACAGGTTAAATTACTTCATACTTCTGACGTTCAGAAGCCACCGCGCGTTCTACAGGCATGCTTTGTTAGCCAGAAATTGGGGAATTTTAGTAAAGCTTCCAATCAGTTTAAGGAACTAGCAAAAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGA

Coding sequence (CDS)

GCTTGTTCGACATCGTCTCTTCCGTCTGCGTGGTGTTCATCATCGCTCGCAAGTCGTCGCCACCTCTTCTGTCTGCGTGTCGTTTCGTCGTTGCTCATGGTTGCTCGTGTTCACCGTCGCTCGTTGCTCGTGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCCGTCGTCGCGCGTTCTGTTCCGTCTGCACATGTTCGTTGTCGCTCGCAAGCAGCCGCCGCCTCTTCCGTCTGCGCAGGTTCGTCTGCCGCCGCCGTTCAGAAGCCACCTCTTCCATCTGCACAGGTTAAATTACTTCATACTTCTGACGTTCAGAAGCCACCGCGCGTTCTACAGGCATGCTTTGTTAGCCAGAAATTGGGGAATTTTAGTAAAGCTTCCAATCAGTTTAAGGAACTAGCAAAAATCCATTGGAGCAGTGAAGCCATGTTTGCGGCAATTGATTGA

Protein sequence

ACSTSSLPSAWCSSSLASRRHLFCLRVVSSLLMVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPLPSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAKIHWSSEAMFAAID
Homology
[Close]
BLAST of MELO3C033665 vs. NCBI nr
Match: KAA0066637.1 (uncharacterized protein E6C27_scaffold979G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 7.9e-44
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL
Sbjct: 1   MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 60

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK 137
           PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK
Sbjct: 61  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK 104

[Close]
BLAST of MELO3C033665 vs. NCBI nr
Match: XP_016903446.1 (PREDICTED: uncharacterized protein LOC103503375 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-31
Identity = 83/93 (89.25%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL
Sbjct: 1   MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 60

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFS 126
           PSAQVKLLHTSDVQKPPRVLQ     Q    +S
Sbjct: 61  PSAQVKLLHTSDVQKPPRVLQTLVAIQACSTYS 93

[Close]
BLAST of MELO3C033665 vs. NCBI nr
Match: TYK29848.1 (uncharacterized protein E5676_scaffold208G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-16
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 0 

Query: 11 WCSSSLASRRHLFCLRVVSSLLMVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRS 70
          WCSSSLASRR LFCLR +S           S  VVARSVRGRSQA VARSVPSA VR RS
Sbjct: 4  WCSSSLASRRRLFCLRFIS-----------SFFVVARSVRGRSQAAVARSVPSAQVRRRS 63

Query: 71 QAAAASSVCAGSSAAAVQKPPLPSAQV 98
          QA  ASSVC GSS+ AV+K PLPSAQV
Sbjct: 64 QATTASSVCVGSSSVAVKKSPLPSAQV 79

[Close]
BLAST of MELO3C033665 vs. NCBI nr
Match: KAA0042422.1 (transcription factor bHLH130 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 2   CSTSSLPSAWCSSSLASRRHLFCLRVVSSLLMVARVHRRSLLVVARSVRGRSQAVVARSV 61
           CSTSSLPSAWCSSSLASR  LFCLRVVSSL +VARV RRSLL+VARSVRGRSQA  +  +
Sbjct: 69  CSTSSLPSAWCSSSLASRCRLFCLRVVSSLPVVARVDRRSLLMVARSVRGRSQADFSHGI 128

Query: 62  PS 64
            S
Sbjct: 129 DS 130

[Close]
BLAST of MELO3C033665 vs. NCBI nr
Match: TYK09604.1 (uncharacterized protein E5676_scaffold458G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-10
Identity = 58/115 (50.43%), Postives = 66/115 (57.39%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           +VARVHRRSLLVV+RSVRG                 RSQAAAASSVC GSSAAA+QK PL
Sbjct: 20  VVARVHRRSLLVVSRSVRG-----------------RSQAAAASSVCTGSSAAAIQKLPL 79

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAKIHWSSEAMFAA 148
           PSAQVKLLH S VQ      +   +++  G            +KI WSS    AA
Sbjct: 80  PSAQVKLLHNSAVQCHRAFYRHALLARNWGT-----------SKILWSSSDTVAA 106

[Close]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match: A0A5A7VHQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00580 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.8e-44
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL
Sbjct: 1   MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 60

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK 137
           PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK
Sbjct: 61  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAK 104

[Close]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match: A0A1S4E5D3 (uncharacterized protein LOC103503375 OS=Cucumis melo OX=3656 GN=LOC103503375 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.7e-31
Identity = 83/93 (89.25%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL
Sbjct: 1   MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 60

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFS 126
           PSAQVKLLHTSDVQKPPRVLQ     Q    +S
Sbjct: 61  PSAQVKLLHTSDVQKPPRVLQTLVAIQACSTYS 93

[Close]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match: A0A5D3E240 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00870 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 0 

Query: 11 WCSSSLASRRHLFCLRVVSSLLMVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRS 70
          WCSSSLASRR LFCLR +S           S  VVARSVRGRSQA VARSVPSA VR RS
Sbjct: 4  WCSSSLASRRRLFCLRFIS-----------SFFVVARSVRGRSQAAVARSVPSAQVRRRS 63

Query: 71 QAAAASSVCAGSSAAAVQKPPLPSAQV 98
          QA  ASSVC GSS+ AV+K PLPSAQV
Sbjct: 64 QATTASSVCVGSSSVAVKKSPLPSAQV 79

[Close]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match: A0A5A7TG82 (Transcription factor bHLH130 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold943G00400 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.8e-13
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 2   CSTSSLPSAWCSSSLASRRHLFCLRVVSSLLMVARVHRRSLLVVARSVRGRSQAVVARSV 61
           CSTSSLPSAWCSSSLASR  LFCLRVVSSL +VARV RRSLL+VARSVRGRSQA  +  +
Sbjct: 69  CSTSSLPSAWCSSSLASRCRLFCLRVVSSLPVVARVDRRSLLMVARSVRGRSQADFSHGI 128

Query: 62  PS 64
            S
Sbjct: 129 DS 130

[Close]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match: A0A5D3CEH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold458G00370 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 58/115 (50.43%), Postives = 66/115 (57.39%), Query Frame = 0 

Query: 33  MVARVHRRSLLVVARSVRGRSQAVVARSVPSAHVRCRSQAAAASSVCAGSSAAAVQKPPL 92
           +VARVHRRSLLVV+RSVRG                 RSQAAAASSVC GSSAAA+QK PL
Sbjct: 20  VVARVHRRSLLVVSRSVRG-----------------RSQAAAASSVCTGSSAAAIQKLPL 79

Query: 93  PSAQVKLLHTSDVQKPPRVLQACFVSQKLGNFSKASNQFKELAKIHWSSEAMFAA 148
           PSAQVKLLH S VQ      +   +++  G            +KI WSS    AA
Sbjct: 80  PSAQVKLLHNSAVQCHRAFYRHALLARNWGT-----------SKILWSSSDTVAA 106

The following BLAST results are available for this feature:
BLAST of MELO3C033665 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066637.17.9e-44100.00uncharacterized protein E6C27_scaffold979G00580 [Cucumis melo var. makuwa][more]
XP_016903446.13.4e-3189.25PREDICTED: uncharacterized protein LOC103503375 [Cucumis melo][more]
TYK29848.12.4e-1670.11uncharacterized protein E5676_scaffold208G00870 [Cucumis melo var. makuwa][more]
KAA0042422.11.6e-1279.03transcription factor bHLH130 [Cucumis melo var. makuwa][more]
TYK09604.12.6e-1050.43uncharacterized protein E5676_scaffold458G00370 [Cucumis melo var. makuwa][more]
BLAST of MELO3C033665 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VHQ53.8e-44100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S4E5D31.7e-3189.25uncharacterized protein LOC103503375 OS=Cucumis melo OX=3656 GN=LOC103503375 PE=... [more]
A0A5D3E2401.2e-1670.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TG827.8e-1379.03Transcription factor bHLH130 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5D3CEH71.2e-1050.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C033665 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033665.1MELO3C033665.1mRNA