MELO3C033658 (gene) Melon (DHL92) v4

Overview
NameMELO3C033658
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionLysosomal cystine transporter family protein
Locationchr09: 3036837 .. 3040332 (-)
RNA-Seq ExpressionMELO3C033658
SyntenyMELO3C033658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCAGCCATTTAATCATAGAACAGAACGGTATTATTTTCTTAATGTCCTTTAACAATTCTTTGCACACATCAATTGAAATATTATTTGCACTTGTTGTTGTCTTAGTTCTCTTTAGTGTTAGATTTTAGGATGTAAATATAACCAACATTTTCATTCTTGCAGAAGTTGAAGCTTGTGGTTATGAAACAAATGAGGTTTGTCCACTTTAAAGATATAAGTTTCCTTTTGAAGTTGGATAGAAACGCAGAAGTTGACCCATGCTTCTTTCAGTCTCTTTATGCCAAAGCTAACAGAGCGTTGGAATGCCCTTACATAGATGACTTGCACAAAGGTCTGTGTTGGGTCCAATTTTCTGATGCTTTTCTTTGCATCTTCATTCTTTTTGTTTTCACTTTTTTTATTAGTTTTTCTTAGTTCTTTGAGGTTTCAAGAATCCATTTCTACAATAAGTTGATCTAAGTCAGTAGGATCTGCAGGTGTTGAGGCCTCTCCAAGATTTTTCTCAAAACTCTTCTCAATATCTTTCCACTTCTTGTTTTTAGCAACACATTTGCCCAATGTATTTTATCAGGTGCTGCAAATGGTCCAATTTGGAAATGCAATAACAAAACATTTTACTCTTAAATCACTTTGAATCATATTATATGGCTTCACAACAATGTTAGTGCTAGTGCTAAAGTTGTTGATTCTGTTATTATTCTATATGGAGGTAACCTCTTTGCTTGTATGAAAAATATTAATATGTATGCTACATTACACTCTTACCTATCTACATTGTTGTTGTGTGGATAATTATCAATACGAACATTAGGCAAGAGCCGTAAGCATTTTTGGTACATTTTAAGTTACTGTATTCCTAAGTTCTTATTGTTGTTGGATCATAAACTGTTTGTTTATCATGGTTTGATTTGCTTCAATTTTATTTTCCTTATATGTAAGAACATCGAATACTGCCTAACTTCTTATTCATTTGTGTATTGATTCTTCCTTTACAAATGCACTGGTGGATGACAAGTTTGTGAGGGACGTAGTCAAGTTCTCCAACAAAACTTCCACTTTTGGACAGGCTTTTGTATATGAGGTATCAAATTACTCATTTCCTATGTAAAATATGGAACTTGTTAATTCTGGTTTGGTTTGTTCTTTAACCAAATTTAATCAATTTGGATTTGGTTATTAAGTGGCTGGTTTTTGCTCTTTTTTCGTTCTCCATTACTTTAAGTTTCTTAAAAATCTTAGCCCCCTAAATTTTGACTACTTTTTGGTTCTTGTTGTTGCTATTTTAATGTTGGTTTTTGTTCTTGTTAGGAATGTTGGTTTTGGTTTTTTATCTGATTCAAGTAATTAAACGATTTCTATGAGTATTTATAACGATATTTTCTAATGGTATGTTTTTCATTCCAAGAGCTCTTGCAGTTTCCAAGGTTGAGAGCTTTTCTTAAGTAAGATTAATTGTTACGTAAGTGAAGTCCTTAATTTGTTTGGTTTATTTGGTGGCTTTAATTTGTTTTGTTAATTTGATGGCTTTAACTGTTGTAATGTTTATAAGATTACACCTTAAGCTTAGATATGTAGCTATATTTGTAAGTTCTTACAATAGCAAATAACTTTCTGTTATGGTTGCAAGACAATTGAAATTTTTGTTGTTATGAGTTCCTTTCTTTTAGTTGGTTTTAAATCATATTATACAAGTATTTTTTTATTACATGAGGTTGCCTATTTGGACGATAAAATTAAAGTCATAGTATGTAGAAAGGTTCACAAACTTGCAAAACATCTTGGAATACGGTCAAGAATATTTCCTTTGTTAGATTATTTAACATTGGTTCCTGTTATATGACAACAGTGATGCTATTTTGAAATAGATTTGAGGTTGCAATTTGTTTTGTTACTGCTATTTTTCTTTTATCTTTGTAAATACATAAGAATTTTTATGTATTTGTATTCTTGAAAAAATATTGATTGTTTGTTATTCACTCTCTAATTCAGAACAAAAACTAGTGAAATTCTCAAGATTATCATGGCTCCTCTTTGTCTGCAAACGATTAGCATTGCAACATTTGCAAAAAAGGTAATACCATGTCTTTAAATGGTAGATGCATCTTGCTTTTCTGTTACTCATTATTGTAACCAAGTAGGTGATTACATGTCGAATATGTGTGGTCCCAAACGTGGCTTCTTGCAATCAACCTTGAAGTTATAGGTTGAAAGCCTTGGAGTTATATTTCTAAGTAATAATATGTTCTTGAAGTACAAATTCTTAGAAGAAAGTTCTGGAAGTACAAATGTTGATGGCCGGAGGCATGCTATGTTATAAATTTACATAGGGATTAAAAACCACTCGGATCTAGTGGTAAAAGGTTCTTGTTTATGAGTCCTTGTTTATAAGAAGGTTTTCCTTTATAAGTCCTTGTTCATAAGAAGGTTTTCATATATTTAAAATATTATATTTATGTAGGTCATAGTCATAGTACTTGTGGAAGAGTGTTGTGTTTGACATTTGTGTACGAGGGGTGATTCTAAAAGAGTGAAAAACACTGTCGCATTTCTTTTCTTTGTATTATTTTTAGCCATAATGCAATTTGATCTTTTTTATTTCTCGAGCAAGAGTTGTATCTTAGTTCTTGAAACTTTTCCTCATGTAGTTGGCCCAATGTCTCGAAGCTTCTAGCTTCCTTTTGATATTTTCGATTGTTTCTCAATGTGAAAGTCCACATGATGCATTTGCACTTAGTCATGTTAATGCATTTGCACTTAGTCATGTTAATGTTCTTGTTACCTCACAGGTACTGCATTGCTTATGTTATTGTGCTTTTAAGTTATACTTGTTTTTCCTCTTTTTCCTAAATGTCTCCTTCCATATTGATGGTTAAGCATTTGGATCGGACCAAAGTCAAAATTGTTAATTCACAAGTTTGATGACCAATCAAAACTCTTGTACTTGATAACCTAAAAGAACAAAACATAATTAAATTGATCGTAGGGGGGCATTTGACATGTAGGTTTAGAATTCTAAACTTGCTTTTGGTAGCCTAGCTTGAGTTTAAGAAAACTGTATTTGAGCTGCAGGTTTAGGAAGCCCAAATTTAAAAGGTCTGTGTTTGGAGTGTATGCTTAAGAGGTTGAGATTGAAGTCCAAATTTATGTCTTGGGTTTGTGAAGCATTTTTTTTTATTTGTACTTAGTGGTTGCTTTTATCTATATTTAATTGCTTAATTGACTATTATTAGTATTTCATAATCATATATTAATATATATTTTATATATTCATGTAGGTGTGGGTAAAATGAAACCTTGCCAAAGCAAAAGCAAAAGAAAAAGAAAACCAACAATGACAACTCAATTACATTGATAATATAACCTTGAGTACTCAATGAATCAAGCGTATTTTGAGAGCTAGAAAATTATTATATTCCAGAAAATTACTCAATACTTTATTTTGTGACGTTGATGTTATCAATGGAAGTTATGGTGTTTGGTTTGTTATGAAA

mRNA sequence

ATGATGCAGCCATTTAATCATAGAACAGAACGGTATTATTTTCTTAATGATGTAAATATAACCAACATTTTCATTCTTGCAGAAGTTGAAGCTTGTGGTTATGAAACAAATGAGTTGGATAGAAACGCAGAAGTTGACCCATGCTTCTTTCAGTCTCTTTATGCCAAAGCTAACAGAGCGTTGGAATGCCCTTACATAGATGACTTGCACAAAGGAATGTTGGTTTTGGTTTTTTATCTGATTCAAGTTGCCTATTTGGACGATAAAATTAAAGTCATAGTATGTAGAAAGGTTCACAAACTTGCAAAACATCTTGGAATACGAACAAAAACTAGTGAAATTCTCAAGATTATCATGGCTCCTCTTTGTCTGCAAACGATTAGCATTGCAACATTTGCAAAAAAGGTAATACCATTTGGCCCAATGTCTCGAAGCTTCTAGCTTCCTTTTGATATTTTCGATTGTTTCTCAATGTGAAAGTCCACATGATGCATTTGCACTTAGTCATGTTAATGCATTTGCACTTAGTCATGTTAATGTTCTTGTTACCTCACAGGTGTGGGTAAAATGAAACCTTGCCAAAGCAAAAGCAAAAGAAAAAGAAAACCAACAATGACAACTCAATTACATTGATAATATAACCTTGAGTACTCAATGAATCAAGCGTATTTTGAGAGCTAGAAAATTATTATATTCCAGAAAATTACTCAATACTTTATTTTGTGACGTTGATGTTATCAATGGAAGTTATGGTGTTTGGTTTGTTATGAAA

Coding sequence (CDS)

ATGATGCAGCCATTTAATCATAGAACAGAACGGTATTATTTTCTTAATGATGTAAATATAACCAACATTTTCATTCTTGCAGAAGTTGAAGCTTGTGGTTATGAAACAAATGAGTTGGATAGAAACGCAGAAGTTGACCCATGCTTCTTTCAGTCTCTTTATGCCAAAGCTAACAGAGCGTTGGAATGCCCTTACATAGATGACTTGCACAAAGGAATGTTGGTTTTGGTTTTTTATCTGATTCAAGTTGCCTATTTGGACGATAAAATTAAAGTCATAGTATGTAGAAAGGTTCACAAACTTGCAAAACATCTTGGAATACGAACAAAAACTAGTGAAATTCTCAAGATTATCATGGCTCCTCTTTGTCTGCAAACGATTAGCATTGCAACATTTGCAAAAAAGGTAATACCATTTGGCCCAATGTCTCGAAGCTTCTAG

Protein sequence

MMQPFNHRTERYYFLNDVNITNIFILAEVEACGYETNELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKGMLVLVFYLIQVAYLDDKIKVIVCRKVHKLAKHLGIRTKTSEILKIIMAPLCLQTISIATFAKKVIPFGPMSRSF
Homology
[Close]
BLAST of MELO3C033658 vs. NCBI nr
Match: KAA0041331.1 (lysosomal cystine transporter family protein [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-07
Identity = 35/56 (62.50%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 17 DVNITNIFILAEVEACGYETNELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
          DVN+TNIFILAE EACG ETNE             SL AKAN ALECPYI DL +G
Sbjct: 36 DVNVTNIFILAEAEACGNETNE-------------SLDAKANSALECPYIADLRRG 78

[Close]
BLAST of MELO3C033658 vs. NCBI nr
Match: ADN34140.1 (lysosomal cystine transporter family protein [Cucumis melo subsp. melo])

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-07
Identity = 35/56 (62.50%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 17  DVNITNIFILAEVEACGYETNELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
           DVN+TNIFILAE EACG ETNE             SL AKAN ALECPYI DL +G
Sbjct: 134 DVNVTNIFILAEAEACGNETNE-------------SLDAKANSALECPYIADLRRG 176

[Close]
BLAST of MELO3C033658 vs. NCBI nr
Match: KAA0066120.1 (mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa] >TYK15160.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 38 ELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
          +LDRN EVDPCFFQSL AKANRALECP I DL KG
Sbjct: 19 KLDRNEEVDPCFFQSLDAKANRALECPCIADLRKG 53

[Close]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match: A0A5A7TI46 (Lysosomal cystine transporter family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003370 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07
Identity = 35/56 (62.50%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 17 DVNITNIFILAEVEACGYETNELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
          DVN+TNIFILAE EACG ETNE             SL AKAN ALECPYI DL +G
Sbjct: 36 DVNVTNIFILAEAEACGNETNE-------------SLDAKANSALECPYIADLRRG 78

[Close]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match: E5GCE1 (Lysosomal cystine transporter family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07
Identity = 35/56 (62.50%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 17  DVNITNIFILAEVEACGYETNELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
           DVN+TNIFILAE EACG ETNE             SL AKAN ALECPYI DL +G
Sbjct: 134 DVNVTNIFILAEAEACGNETNE-------------SLDAKANSALECPYIADLRRG 176

[Close]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match: A0A5A7VG35 (Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00250 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 38 ELDRNAEVDPCFFQSLYAKANRALECPYIDDLHKG 73
          +LDRN EVDPCFFQSL AKANRALECP I DL KG
Sbjct: 19 KLDRNEEVDPCFFQSLDAKANRALECPCIADLRKG 53

[Close]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match: A0A1S3BEB8 (protein GLE1 OS=Cucumis melo OX=3656 GN=LOC103488947 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-04
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 96  RKVHKLAKHLG-----IRTKTSEILKIIMAPLCLQTISIATFAKKVI 138
           R + +L K +G     +RTKTSEILKI MAPLC QTISIA FAKK++
Sbjct: 369 RHIARLIKQIGGTKENVRTKTSEILKIFMAPLCPQTISIAAFAKKIV 415

[Close]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match: A0A5A7SUC8 (Protein GLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001690 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-04
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 96  RKVHKLAKHLG-----IRTKTSEILKIIMAPLCLQTISIATFAKKVI 138
           R + +L K +G     +RTKTSEILKI MAPLC QTISIA FAKK++
Sbjct: 415 RHIARLIKQIGGTKENVRTKTSEILKIFMAPLCPQTISIAAFAKKIV 461

The following BLAST results are available for this feature:
BLAST of MELO3C033658 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041331.12.6e-0762.50lysosomal cystine transporter family protein [Cucumis melo var. makuwa][more]
ADN34140.12.6e-0762.50lysosomal cystine transporter family protein [Cucumis melo subsp. melo][more]
KAA0066120.12.2e-0682.86mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo v... [more]
BLAST of MELO3C033658 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TI461.3e-0762.50Lysosomal cystine transporter family protein OS=Cucumis melo var. makuwa OX=1194... [more]
E5GCE11.3e-0762.50Lysosomal cystine transporter family protein OS=Cucumis melo subsp. melo OX=4126... [more]
A0A5A7VG351.1e-0682.86Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo... [more]
A0A1S3BEB86.5e-0461.70protein GLE1 OS=Cucumis melo OX=3656 GN=LOC103488947 PE=3 SV=1[more]
A0A5A7SUC86.5e-0461.70Protein GLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001690 P... [more]
BLAST of MELO3C033658 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033658.1MELO3C033658.1mRNA