MELO3C033593.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033593.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr09: 1922240 .. 1928043 (-)
RNA-Seq ExpressionMELO3C033593.jh1
SyntenyMELO3C033593.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGCCGAAAAAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTTCAAATTGTGGCGCACTCTCAGTTGCGTTGGGCTTAACATTATCACTTTCCGGTGAGGGCTTCCATGGCCGCTTTACTGCCCAAGCTTTTGCAGTCAAAGCGAGGGATTTCGCCCTACATTCAAATTCTATTTTTTCCCTTTTTCTTTTTCCGAATTTCTTTATTCTTATCTTTCATCATTCGCTTTCTTATTGTAATTTTGACCACTTGCTCATGAATTCATTTTTTAATTATGTTTTTTTTGGGTAGAATGTATATTTTGTTTTTTTTTTATGGTGGGGAGTATGATAAATTGAAATTGGCATTTATATATTTATATGTTTTTGGGTTTTCATTCAGATGATAAGAACGATGCAGGAAAAGCTAAAACCACGTTTTTCGAAAAAAAAAAAAAGATGATCAATTGCATCCGACGGGTATTTTTTTTTTTTTTTTTTGCATTCAACTTGTCTGAATATCTCAAATAAATGTATGTATATCTCTAGAAGCTTCTTCTTTTCTGCTTCCTTTACGCTTGTTCTTTTGTTGTCGGGTTTGCAAATGGTCAATCTAAGCTCCGTTGTGGACACAGGTCTTGGAACTGCTGCTGCTAAGTGTGGTTGTTATGTACGTCTATCATCTGACTATTGCACAGGATAATGCCCGAATCACTTATCTGAAATTAAGAACAGAAGTTTTTTCAATTGTTGATTGATTAGATAAATGAAAATTAAGAGTTTTTTTAAGTGGGGTTGGACTTAAAAACGTCCCCCATTTTTTACCTTTTTCAAACCTGGATTTTCGAGCCACTCGTCGGATATGACTTTCATTTCTTTGAAGGATTTCGTCTATTTTATGGTGTTGTGTTAACAACGGTCCTGAGAATTCAATGTGTGATTCTGTATCATCGTTGTCCTGTTCATTTATGAGAGAACATAATCAATTGGACTAGTCCAGAAAAGAAGTTATTGTTGTGTAAGTGAATGGAGGGATGCTTACGAGGTTTGCTGTGGTGTTGGATGGTGGTTTTGGATATAGTTCATTGGACATATCCAAGAACGGGTATGCTTCGGATGCATCAAAAGACTCGGGGAAATTGTGTTTTCTTCTATGGTGCTTTCGTAATTCGTAGTCCTGCGTGCCTGAACTGACTGGAATGTATGTGTGTCCATTCTGTTTTTTTGTTATTTCAAAGGTGTAATTTGCAAAGGATGGATCCAGAGCACTTATTTGGCTCTTAAGACCATCTGATATTGCAGATGTAGCTTCCTCTTTTCGCTTCTTTACCCAAGAAAAACCACTAGATGCTGAGACCGGTATTGGGGCTGTGAATGCACTATCTCCTCGCTGATTTGGTGCTGTTGCAGCCTGGGACTCTGATGTTGTATCAAATAGTTGCTTCTGAGGATCTCTTTGGAAAACGTCACCTTGTTCTTTGGAAAGGTTGGCAGTATTGCTGCCATTCCGTCGAGAAGGTTGAATGTTTTCTTCTGCTCCCTGTGGAGGAAAAATCTCCATAAAAGTTGGTAATAGTTTTTGAATGGAGAGTAATGTGGTAAGGAAGAATGGGTTAAAGAAGGAGAAACCTCTTTGATTGGCACTTTATGACTGTTCAATTCTTGGAAATTCCTTCTAACTCTTCTAGGCCTTTGTGTTACCCCTGTCTCTTTTGCTTTTGCATTAGCCCTCTTCCTGCAGGTATTCGATAGGTATAGTTCTTCAGAATATATTGAAGAAACTGGATTTTGCAGCAAAGTTGGAGAGAGAGAGTGAAAGTTTCACCTTCGCGCATCTTCACGATTTTTGGCATCCATTTCTTTATTTGGTGGATACTTGGGCAAGGTAGATGGATCACAAGCATATGGCTTCGTTTTGAAATACTGGAAAGGAAGGCAAACCATTAACCCAAAAGCATTTGGGACTTTGAGTAATAGTTGTGAGGATAGCAATCGTGTTTGAGAGTAAGTCTAAGTGTTCTCAAGCAAAAGTGATTTACTTATAATTTCCATTCTTTTAAAAAAAGTTTTGTTGAAAATTTGGGGAGACTCAAACTAAGCTAGATGGTTTCACTTTTTAAAGTAGACATGAGTTTATTCAACTGTATCCGACCCATAAGCTATGCCGACATGCCTGATGGATTACAATGTTACTTTTTTAAAATGCTAAATTAGCATGATTGTTATAGACGTTGACAGGACACACTGGTATTTGTGAAGTTGAATATGAAGAAGGGGCAAGAGTTACCTCAGACATGAGAGCAGATGAGGCGGTTCCACGCTTGTAAGGTTCTATGGCAAGAAAAGATTCTAATAGGCTCACTGCGGATGGTGCAAATTCTTTGCACTTTTCATTCAGAGAACTTTCATATGAATGTTGGGGTTTGAACATAGCTGCATGAGGAAGCTTTGTTTTTTTCCAGAACTCTTCAGGTGGGGAGCCGCAAAGTTTGAATATTTTGTGCAATTGTTCGACCTGTTTTGTTTTTTTCCATTCGTGTCAGATCAAACACTAAGCAACAATCAATAAGAAAAAGGCTCCTATTGGAAACCGCCATCCATTACCTCGGTTCTTCCTTTAAGAAGTGGTTTTCCCAGGTGCAATTCAGCAAATACGCATCCTATACTCCAGAGGTCCACAGTTAATCCGTAATCTGTTGAACCCATCAGAAGCTCGGGTGGGCGATACCATAATGTCACCACTCGACTTGTTAGAGCTTGCTTGTTTCTCGAGTTTATGACATTTGCTAGTCCGAAATCTGCTAACTTCAGAACTCCTTCATTGTTTACCAAAATATTGGATGCTTTAATGTCTCTATGCATTATACCCCGAAGGTGGCAATGCTCAATTGCAGATAGAAGCTGTCTCATATAACACTTGATCTGAAAAAATGAACACAATGGAAGAAGAAATGAGATTGTTTTTTTATTAACACTGCCAACACTATTGATTGAGCACGTAAATCAGTGGATGAAATACCAACCTGTGCCTCACTGAACTTGACATTAGGAGAAGACACTAGCCCTGCAAGGTCATGTTCCATGTATTCAAATACAAGGTAAATGCTGCTAGACATTTTGGAAGTAATTATTCCTTCTAATTGCATGATGTTTGGATGTTCAAGCCTGCGCAAAATCATAATTTCCCTTGCCATAAACCTAATGCTCTCCGGTTGAAAATTGTCAAAACGAACCTTCTTCAAGGCAACCATTTTTCCTGACTCAACTTCTCGAGCACGAAACACACTGCTGTATGTACCTTGTCCAATCTAATTCAAAAAACAAACTTGTTTCATCTTTCTGGTAATGTGTAAAGAAAAAGATGCACATCAAACATTCAAGAGGATGATGCATTACACGGGCCATTGCAGATAACAAGATTTATAGACCTTCAGAACATACAAAGAACAGAACTTGATCTTATGCTCGAAGAGACATGTTTGAGGTTCGATTAATTCAAATCTTGGAGCAGAAAACTTGTATATGTTCACCTAAGATAGCATTTGCTAAATGCTGTCTCACCGAATGGTGTTGTTCTAAGTTCTCGCCACTCAAAGCCATATACGAATGGCATAAAGACCATTTTAACAACTGCACAGAAAGACTCTTAACGCAACGTGGTTGGTTAATCACTCTGTTTTTCATATGAACCTGCGTTAGATTATTAGAATCAATCTCTTGGGAGTAGGCCCTTTGTAGTTTTTTAAGGTAATGTTCTATTTATTCTAGAAGGAATGAGATGGTTCATTTATGATATATCTTAATGATAGATCAGATTGAACTTTAATGGAATCAAAGTTCTGATTGTATTTTACTTTTTTCATCAGGACAAACGAAGAAATCGTGGTGTCATATTCGTACCTTTTCCAACTTCTCGAACGAATCAGCTCGGAGAGGAACCCATCCATGTACGGCCTCACCGGCAGCACTACTAAGCCAAGAGGGCCAGCCGGCGGCAATCTGCTCAGCTTCAACGTAGCGTTGAGAAAACCCTAATCTGAAAGAACCCCCCTTGCCTCCTTTAGATTTCTTAATATCTCGACTTCGATCCTCCGATTTGTCCTCCCCTTTCTTCTCATAATCAAGCGTCGTCACGGAATGAGCTTTGGATAAAGGCGGCAGGGTCACAACAGAACCATTCTCGGCGGCAACGGTGGCGGTTGTAGTGGTGGTCGGTTTATTGGCTTTGGTCCGATGATGATGATGGTTATAAACAGGTGATGCCGCCGCCTTAGCTACGTGCTTGGAGCTAATGCAACCCATGAACCACCAAATCCCGACAGCATCGATCGGAGAAACGACACAAGGGCGATCAAGATCAACCCTGATCAGGAAATGGGCTGCTCGGCACAAAGCGGAAGAGGGGGGATCGAACCCCTACATCCAACGGCAACTCAAAAGGGTCTGCTGGATTATCTGAGGATGTAAAAAAAGAAGAGAAAATGGATTGAACCCATCTGAAATGAGAGCCATTTTTGGGTTTAACTTGTTGGCTGGCAACACAATGACCTCGTGTTCTTCATACTGCGAGATCTGCAGTATGAAGAATTGGCCAAATAGTTTCTTTTTTTTTGTAAGAAACGGTCCGAAAGCAGAGGAACGAAAAGAAAGAGAAACATTGTGGGTCCTAACTGCCTTCTTCTTCCTTTTCTCTGCTTTTTTTGTTATCTATACCGTTTTTAATTTCATCTTTTCTTTTTCTCTCTTTCTTTCTATTTTCTCTTTGCTTTCCCTTCATTTCACTGATTCCGCCATTAGAGCACTGTACTACAAGCTTTGAGTTTCAGTTCCTTTGGGAAATTTCGTAGCAATAGCCCTCAAAAGTTTATATCTTTCACAATTAGCACTTTGGAAAGCCTTTGAAATTGTTCTCATCTTTTCTGGTTTAAGTTTTAATAAAGGATTAGTTTTTCTCAGTGTTATTATTCATTGTTTTGGGTTTTCTCAGGGAAATTTATGTCGTTTGTTTTGGTAAATTTATTGGGTAGTTTTTTCGATCTTTTCTGGTTGAGATTTAAATAAAATAAATTATTTATTTCATCTCGCATTCAAACCATCAAGAGTTTTAGGCTTTCTCGGTGAAATCTTATTGGGATGGGGACTCCACCAAGAAAACCAATCGATATCAGATGAAAATCTTGATTCTTATTTTATTGAATTCTTCAGGGTTGGTCTAGAAATAATCAAGAATAAGTATTTCAATGATTTTTTAGTTTTAGAAAAGGTACTATTTTTAAGTTACTAATACAATTTTCTTAATTTCAATCAATCAAAATTTTAATCTTTCATTAATATTTCCCATGTGGGGTTTTGTATTTGGAACAGAAAAGAAAAGAGTATGATATCCATAGACAAAACTCTTCTTTCGGCTCATCATTTCTCTCTTTTCCTTTTCCTTTTCCTTTCTTTCTTTGCTTTCTTTCTCATTAGTTTCACTCATTTCTCTCTTTTCATTCTTCACTTAATCATTACAATCATCCCTTATTCCTACATTTTACTTTTCTTTCAACTATCTTTCTCATTGCTTTCACCACCATTGGAATGGTTACATATATACTTTAGGTCAAGACTAAGGGACATTCGGGGTAAGGAACTTGTTACTATAGTGCTAGGCTTGGATTCCAAGGATAGATCATTTTAGTTTGGGTTGTAATATCGTATGATTGAGGGGTAAATTATTTTTAATTTGAGAAGGAAACAATGAACACCAAAGCAAGAAAAATGATAAATGTAAGATTTTGATATAG

mRNA sequence

ATGCAGAGCCGAAAAAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGATGATAAGAACGATGCAGGAAAAGCTAAAACCACAAGCTTCTTCTTTTCTGCTTCCTTTACGCTTGTTCTTTTGTTGTCGGGTTTGCAAATGGTCAATCTAAGCTCCGTTGTGGACACAGGTCTTGGAACTGCTGCTGCTAAGTGTGGTTGTTATACGTTGACAGGACACACTGGTATTTGTGAAGTTGAATATGAAGAAGGGGCAAGAGTTACCTCAGACATGAGAGCAGATGAGGCGGTTCCACGCTTGACAAACGAAGAAATCGTGGTGTCATATTCGTACCTTTTCCAACTTCTCGAACGAATCAGCTCGGAGAGGAACCCATCCATGTACGGCCTCACCGGCAGCACTACTAAGCCAAGAGGGCCAGCCGGCGGCAATCTGCTCAGCTTCAACGTAGCGTTGAGAAAACCCTAATCTGAAAGAACCCCCCTTGCCTCCTTTAGATTTCTTAATATCTCGACTTCGATCCTCCGATTTGTCCTCCCCTTTCTTCTCATAATCAAGCGTCGTCACGGAATGAGCTTTGGATAAAGGCGGCAGGGTCACAACAGAACCATTCTCGGCGGCAACGGTGGCGGTTGTAGTGGTGGTCGGTTTATTGGCTTTGGTCCGATGATGATGATGGTTATAAACAGGTGATGCCGCCGCCTTAGCTACGTGCTTGGAGCTAATGCAACCCATGAACCACCAAATCCCGACAGCATCGATCGGAGAAACGACACAAGGGCGATCAAGATCAACCCTGATCAGGAAATGGGCTGCTCGGCACAAAGCGGAAGAGGGGGGATCGAACCCCTACATCCAACGGCAACTCAAAAGGGTCTGCTGGATTATCTGAGGATGTAAAAAAAGAAGAGAAAATGGATTGAACCCATCTGAAATGAGAGCCATTTTTGGGTTTAACTTGTTGGCTGGCAACACAATGACCTCGTGTTCTTCATACTGCGAGATCTGCAGTATGAAGAATTGGCCAAATAGTTTCTTTTTTTTTGTAAGAAACGGTCCGAAAGCAGAGGAACGAAAAGAAAGAGAAACATTGTGGGTCCTAACTGCCTTCTTCTTCCTTTTCTCTGCTTTTTTTGTTATCTATACCGTTTTTAATTTCATCTTTTCTTTTTCTCTCTTTCTTTCTATTTTCTCTTTGCTTTCCCTTCATTTCACTGATTCCGCCATTAGAGCACTGTACTACAAGCTTTGAGTTTCAGTTCCTTTGGGAAATTTCGTAGCAATAGCCCTCAAAAGTTTATATCTTTCACAATTAGCACTTTGGAAAGCCTTTGAAATTGTTCTCATCTTTTCTGGTTTAAGTTTTAATAAAGGATTAGTTTTTCTCAGTGTTATTATTCATTGTTTTGGGTTTTCTCAGGGAAATTTATGTCGTTTGTTTTGGTAAATTTATTGGGTAGTTTTTTCGATCTTTTCTGGTTGAGATTTAAATAAAATAAATTATTTATTTCATCTCGCATTCAAACCATCAAGAGTTTTAGGCTTTCTCGGTGAAATCTTATTGGGATGGGGACTCCACCAAGAAAACCAATCGATATCAGATGAAAATCTTGATTCTTATTTTATTGAATTCTTCAGGGTTGGTCTAGAAATAATCAAGAATAAGTATTTCAATGATTTTTTAGTTTTAGAAAAGGTACTATTTTTAAGTTACTAATACAATTTTCTTAATTTCAATCAATCAAAATTTTAATCTTTCATTAATATTTCCCATGTGGGGTTTTGTATTTGGAACAGAAAAGAAAAGAGTATGATATCCATAGACAAAACTCTTCTTTCGGCTCATCATTTCTCTCTTTTCCTTTTCCTTTTCCTTTCTTTCTTTGCTTTCTTTCTCATTAGTTTCACTCATTTCTCTCTTTTCATTCTTCACTTAATCATTACAATCATCCCTTATTCCTACATTTTACTTTTCTTTCAACTATCTTTCTCATTGCTTTCACCACCATTGGAATGGTTACATATATACTTTAGGTCAAGACTAAGGGACATTCGGGGTAAGGAACTTGTTACTATAGTGCTAGGCTTGGATTCCAAGGATAGATCATTTTAGTTTGGGTTGTAATATCGTATGATTGAGGGGTAAATTATTTTTAATTTGAGAAGGAAACAATGAACACCAAAGCAAGAAAAATGATAAATGTAAGATTTTGATATAG

Coding sequence (CDS)

ATGCAGAGCCGAAAAAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGATGATAAGAACGATGCAGGAAAAGCTAAAACCACAAGCTTCTTCTTTTCTGCTTCCTTTACGCTTGTTCTTTTGTTGTCGGGTTTGCAAATGGTCAATCTAAGCTCCGTTGTGGACACAGGTCTTGGAACTGCTGCTGCTAAGTGTGGTTGTTATACGTTGACAGGACACACTGGTATTTGTGAAGTTGAATATGAAGAAGGGGCAAGAGTTACCTCAGACATGAGAGCAGATGAGGCGGTTCCACGCTTGACAAACGAAGAAATCGTGGTGTCATATTCGTACCTTTTCCAACTTCTCGAACGAATCAGCTCGGAGAGGAACCCATCCATGTACGGCCTCACCGGCAGCACTACTAAGCCAAGAGGGCCAGCCGGCGGCAATCTGCTCAGCTTCAACGTAGCGTTGAGAAAACCCTAA

Protein sequence

MQSRKKPEAERFPLELGVAWYSTGRDDKNDAGKAKTTSFFFSASFTLVLLLSGLQMVNLSSVVDTGLGTAAAKCGCYTLTGHTGICEVEYEEGARVTSDMRADEAVPRLTNEEIVVSYSYLFQLLERISSERNPSMYGLTGSTTKPRGPAGGNLLSFNVALRKP
Homology
[Close]
BLAST of MELO3C033593.jh1 vs. NCBI nr
Match: KAG6578561.1 (hypothetical protein SDJN03_23009, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.0 bits (136), Expect = 2.73e-07
Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 0 

Query: 4  RKKPEAERFPLELGVAWYSTGRDDKNDAGKAKTTSFFFSASFTLVLLLSGLQMVNLSSV- 63
          R+KPEAERFPLELGVAWYSTGR+               ++SF L       ++    S  
Sbjct: 23 RQKPEAERFPLELGVAWYSTGRE---------------ASSFLLPRACFWCRVAKHQSGL 82

Query: 64 -VDTGLGTAAAKCGCY 77
           VD G GTAAAK G Y
Sbjct: 83 RVDAGFGTAAAKNGFY 83

The following BLAST results are available for this feature:
BLAST of MELO3C033593.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578561.12.73e-0747.37hypothetical protein SDJN03_23009, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MELO3C033593.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033593.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033593.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033593.jh1.t1MELO3C033593.jh1.t1mRNA