MELO3C033552 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033552
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein kinase domain-containing protein
Location	chr05: 23347582 .. 23347900 (+)
RNA-Seq Expression	MELO3C033552
Synteny	MELO3C033552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAGTATCTCGTACCACGAACCATCACAACTTCCGCTGTTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTTCGCTGCTTTCGATTCGAAACTTCCTCCCTGGTTTGAGGTTTTTTACTTAGCAAAC

mRNA sequence

TCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAGTATCTCGTACCACGAACCATCACAACTTCCGCTGTTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTTCGCTGCTTTCGATTCGAAACTTCCTCCCTGGTTTGAGGTTTTTTACTTAGCAAAC

Coding sequence (CDS)

CAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAG

Protein sequence

QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL

Homology

[Close]

BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0038927.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERF PFSNLRKGSFPYDC+PTIYFCFHF EIENLSSGTVREISIVLNDIYSIAPSII
Sbjct: 25 QSKERFFPFSNLRKGSFPYDCNPTIYFCFHFAEIENLSSGTVREISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]

BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0037487.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK01963.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 9.2e-23
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERFLPFSNLRK SFPYDCSPTIYF FHF EIENLSSGTV+EISIVLNDIYSIAPSII
Sbjct: 25 QSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]

BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0067290.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]

BLAST of MELO3C033552 vs. NCBI nr
Match: TYK10903.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]

BLAST of MELO3C033552 vs. NCBI nr
Match: TYK03857.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 17  FPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL 62
           FPYD SPTIYFCFHF EIE LSSGT+REISIVLNDIY+IAPS+IL
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVIL 314

[Close]

BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7TBG0 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00060 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERF PFSNLRKGSFPYDC+PTIYFCFHF EIENLSSGTVREISIVLNDIYSIAPSII
Sbjct: 25 QSKERFFPFSNLRKGSFPYDCNPTIYFCFHFAEIENLSSGTVREISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]

BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7T7F6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00640 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-23
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERFLPFSNLRK SFPYDCSPTIYF FHF EIENLSSGTV+EISIVLNDIYSIAPSII
Sbjct: 25 QSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]

BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7VJ90 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001150 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]

BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5D3CG77 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00800 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]

BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5D3BWH6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00510 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 17  FPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL 62
           FPYD SPTIYFCFHF EIE LSSGT+REISIVLNDIY+IAPS+IL
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVIL 314

The following BLAST results are available for this feature:

BLAST of MELO3C033552 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038927.1	2.2e-24	95.08	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
KAA0037487.1	9.2e-23	93.44	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
KAA0067290.1	1.4e-15	100.00	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
TYK10903.1	1.4e-15	100.00	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]
TYK03857.1	5.0e-13	86.67	putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu...	[more]

BLAST of MELO3C033552 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBG0	1.1e-24	95.08	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5A7T7F6	4.4e-23	93.44	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5A7VJ90	6.9e-16	100.00	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5D3CG77	6.9e-16	100.00	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]
A0A5D3BWH6	2.4e-13	86.67	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu...	[more]

BLAST of MELO3C033552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033552.1	MELO3C033552.1	mRNA