MELO3C033552 (gene) Melon (DHL92) v4

Overview
NameMELO3C033552
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein kinase domain-containing protein
Locationchr05: 23347582 .. 23347900 (+)
RNA-Seq ExpressionMELO3C033552
SyntenyMELO3C033552
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAGTATCTCGTACCACGAACCATCACAACTTCCGCTGTTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTTCGCTGCTTTCGATTCGAAACTTCCTCCCTGGTTTGAGGTTTTTTACTTAGCAAAC

mRNA sequence

TCAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAGTATCTCGTACCACGAACCATCACAACTTCCGCTGTTATCCCTGTTAATCTCAATGAAGAGAATTACTTGCGGATTTTCGCTGCTTTCGATTCGAAACTTCCTCCCTGGTTTGAGGTTTTTTACTTAGCAAAC

Coding sequence (CDS)

CAGTCTAAGGAAAGGTTCCTTCCCTTCTCAAATCTAAGGAAAGGTTCTTTCCCTTACGACTGCAGCCCTACAATATATTTCTGCTTTCATTTCACAGAGATTGAGAACTTAAGTTCTGGAACGGTTCGAGAAATAAGTATTGTGTTGAATGACATCTACTCCATTGCACCATCTATAATTCTCTAG

Protein sequence

QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL
Homology
[Close]
BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0038927.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-24
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERF PFSNLRKGSFPYDC+PTIYFCFHF EIENLSSGTVREISIVLNDIYSIAPSII
Sbjct: 25 QSKERFFPFSNLRKGSFPYDCNPTIYFCFHFAEIENLSSGTVREISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]
BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0037487.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK01963.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 9.2e-23
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERFLPFSNLRK SFPYDCSPTIYF FHF EIENLSSGTV+EISIVLNDIYSIAPSII
Sbjct: 25 QSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]
BLAST of MELO3C033552 vs. NCBI nr
Match: KAA0067290.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]
BLAST of MELO3C033552 vs. NCBI nr
Match: TYK10903.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]
BLAST of MELO3C033552 vs. NCBI nr
Match: TYK03857.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 17  FPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL 62
           FPYD SPTIYFCFHF EIE LSSGT+REISIVLNDIY+IAPS+IL
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVIL 314

[Close]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7TBG0 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00060 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERF PFSNLRKGSFPYDC+PTIYFCFHF EIENLSSGTVREISIVLNDIYSIAPSII
Sbjct: 25 QSKERFFPFSNLRKGSFPYDCNPTIYFCFHFAEIENLSSGTVREISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7T7F6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00640 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-23
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSII 60
          QSKERFLPFSNLRK SFPYDCSPTIYF FHF EIENLSSGTV+EISIVLNDIYSIAPSII
Sbjct: 25 QSKERFLPFSNLRKSSFPYDCSPTIYFYFHFAEIENLSSGTVQEISIVLNDIYSIAPSII 84

Query: 61 L 62
          L
Sbjct: 85 L 85

[Close]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5A7VJ90 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001150 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5D3CG77 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00800 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 42
          QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT
Sbjct: 25 QSKERFLPFSNLRKGSFPYDCSPTIYFCFHFTEIENLSSGT 65

[Close]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match: A0A5D3BWH6 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00510 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 17  FPYDCSPTIYFCFHFTEIENLSSGTVREISIVLNDIYSIAPSIIL 62
           FPYD SPTIYFCFHF EIE LSSGT+REISIVLNDIY+IAPS+IL
Sbjct: 270 FPYDSSPTIYFCFHFAEIEKLSSGTIREISIVLNDIYTIAPSVIL 314

The following BLAST results are available for this feature:
BLAST of MELO3C033552 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038927.12.2e-2495.08putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu... [more]
KAA0037487.19.2e-2393.44putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu... [more]
KAA0067290.11.4e-15100.00putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu... [more]
TYK10903.11.4e-15100.00putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu... [more]
TYK03857.15.0e-1386.67putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucu... [more]
BLAST of MELO3C033552 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TBG01.1e-2495.08Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu... [more]
A0A5A7T7F64.4e-2393.44Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu... [more]
A0A5A7VJ906.9e-16100.00Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu... [more]
A0A5D3CG776.9e-16100.00Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu... [more]
A0A5D3BWH62.4e-1386.67Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cu... [more]
BLAST of MELO3C033552 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033552.1MELO3C033552.1mRNA