MELO3C033532.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033532.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr09: 310560 .. 310778 (+)
RNA-Seq ExpressionMELO3C033532.jh1
SyntenyMELO3C033532.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGCGGGGGGATGCATGCAGGTTTTTCGTCTGAGGATCAATCAAAAACATGCCCAGTGAAATTTGCATCAACAGGGACATGTTCAGGGCCATTTGGAATATCAGAATGTTACCATGAAGCAATGGCAAAATACGGAAACATTCCACCGAAGGGTTGTCAATGCATTCCTAATGGCGTTAATTCTCGCTTTTGCCTATGCAATATCATTTGTTAA

mRNA sequence

ATGAATGGCGGGGGGATGCATGCAGGTTTTTCGTCTGAGGATCAATCAAAAACATGCCCAGTGAAATTTGCATCAACAGGGACATGTTCAGGGCCATTTGGAATATCAGAATGTTACCATGAAGCAATGGCAAAATACGGAAACATTCCACCGAAGGGTTGTCAATGCATTCCTAATGGCGTTAATTCTCGCTTTTGCCTATGCAATATCATTTGTTAA

Coding sequence (CDS)

ATGAATGGCGGGGGGATGCATGCAGGTTTTTCGTCTGAGGATCAATCAAAAACATGCCCAGTGAAATTTGCATCAACAGGGACATGTTCAGGGCCATTTGGAATATCAGAATGTTACCATGAAGCAATGGCAAAATACGGAAACATTCCACCGAAGGGTTGTCAATGCATTCCTAATGGCGTTAATTCTCGCTTTTGCCTATGCAATATCATTTGTTAA

Protein sequence

MNGGGMHAGFSSEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNIIC
Homology
BLAST of MELO3C033532.jh1 vs. NCBI nr
Match: KGN52690.1 (hypothetical protein Csa_007932 [Cucumis sativus])

HSP 1 Score: 134 bits (338), Expect = 2.68e-39
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNII 71
          SEDQSKTCPVKFASTGTCSGPFG+SECYHEAMAKYGNIPPKGC+CIP+G NSRFCLCNII
Sbjct: 28 SEDQSKTCPVKFASTGTCSGPFGVSECYHEAMAKYGNIPPKGCECIPDGANSRFCLCNII 87

BLAST of MELO3C033532.jh1 vs. NCBI nr
Match: KGN52689.1 (hypothetical protein Csa_008701 [Cucumis sativus])

HSP 1 Score: 105 bits (263), Expect = 4.57e-28
Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0

Query: 11 SSEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNI 70
          S +DQ +TCPVKFASTGTC  P+G + CY E M KYGN PPK CQCIPNG NSRFC CNI
Sbjct: 10 SDQDQPRTCPVKFASTGTCQEPYGTAGCYDEVMGKYGNFPPKDCQCIPNGDNSRFCQCNI 69

Query: 71 IC 72
           C
Sbjct: 70 YC 71

BLAST of MELO3C033532.jh1 vs. NCBI nr
Match: KAG6607501.1 (hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (257), Expect = 6.22e-27
Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNII 71
          S DQSKTCP +F STGTC+G  GISECY E+MA+ GNIPPKGC+CIP+GV+SR C CN++
Sbjct: 28 SMDQSKTCPQQFRSTGTCAGWIGISECYSESMARNGNIPPKGCKCIPDGVDSRICRCNVV 87

BLAST of MELO3C033532.jh1 vs. NCBI nr
Match: KAG6607502.1 (hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 1.57e-24
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNII 71
          S DQSKTCP +F STGTC    G+SECY E+MA++GNIPPKGC+CIP G +SR C CN +
Sbjct: 25 SMDQSKTCPEEFHSTGTCGDWTGVSECYSESMARHGNIPPKGCECIPKGADSRICRCNAV 84

BLAST of MELO3C033532.jh1 vs. NCBI nr
Match: KAG2672676.1 (hypothetical protein I3760_13G053700 [Carya illinoinensis] >KAG6630931.1 hypothetical protein CIPAW_13G055400 [Carya illinoinensis] >KAG6680685.1 hypothetical protein I3842_13G055000 [Carya illinoinensis] >KAG7949148.1 hypothetical protein I3843_13G046500 [Carya illinoinensis])

HSP 1 Score: 62.0 bits (149), Expect = 1.56e-10
Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIP--PKGCQC--IPNGVNSRFCL 71
          SE   K CP +  + G CSG FG ++C+H+  AKYG  P  P  C+C  IPN + +  C 
Sbjct: 22 SEGSIKFCPAEMKAQGQCSGMFGTADCFHQMRAKYGEAPSPPTNCKCTPIPNDLQNYKCK 81

BLAST of MELO3C033532.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KSV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650550 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.30e-39
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNII 71
          SEDQSKTCPVKFASTGTCSGPFG+SECYHEAMAKYGNIPPKGC+CIP+G NSRFCLCNII
Sbjct: 28 SEDQSKTCPVKFASTGTCSGPFGVSECYHEAMAKYGNIPPKGCECIPDGANSRFCLCNII 87

BLAST of MELO3C033532.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KUV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650540 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 2.21e-28
Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0

Query: 11 SSEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGNIPPKGCQCIPNGVNSRFCLCNI 70
          S +DQ +TCPVKFASTGTC  P+G + CY E M KYGN PPK CQCIPNG NSRFC CNI
Sbjct: 10 SDQDQPRTCPVKFASTGTCQEPYGTAGCYDEVMGKYGNFPPKDCQCIPNGDNSRFCQCNI 69

Query: 71 IC 72
           C
Sbjct: 70 YC 71

BLAST of MELO3C033532.jh1 vs. ExPASy TrEMBL
Match: A0A6A1WK89 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G002309 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.97e-09
Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 12 SEDQSKTCPVKFASTGTCSGPFGISECYHEAMAKYGN--IPPKGCQC--IPNGVNSRFCL 71
          SE ++K CP +  + G CS  FG S+C+H   AKYG    PP  C+C  IP       C 
Sbjct: 22 SEGEAKFCPAEITAEGQCSSMFGASDCFHHMRAKYGEAPFPPTNCKCSEIPQDSEHYTCQ 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN52690.12.68e-3993.44hypothetical protein Csa_007932 [Cucumis sativus][more]
KGN52689.14.57e-2870.97hypothetical protein Csa_008701 [Cucumis sativus][more]
KAG6607501.16.22e-2770.49hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6607502.11.57e-2465.57hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG2672676.11.56e-1041.54hypothetical protein I3760_13G053700 [Carya illinoinensis] >KAG6630931.1 hypothe... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KSV31.30e-3993.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650550 PE=4 SV=1[more]
A0A0A0KUV42.21e-2870.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650540 PE=4 SV=1[more]
A0A6A1WK893.97e-0940.00Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G002309 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033532.jh1.t1MELO3C033532.jh1.t1mRNA